[Dart-dev] DART/branches Revision: 11186

[dart at ucar.edu]

hendric at ucar.edu
2017-03-02 15:52:30 -0700 (Thu, 02 Mar 2017)
195
updating to copy relevant files.  removing reg_factor programs directory
Jeff gave the go ahead to remove the outdated smoother in this directory.

removing old files that are not used anymore.




Modified: DART/branches/rma_rearrange/transcription.csh
===================================================================
--- DART/branches/rma_rearrange/transcription.csh	2017-03-02 20:44:01 UTC (rev 11185)
+++ DART/branches/rma_rearrange/transcription.csh	2017-03-02 22:52:30 UTC (rev 11186)
@@ -19,6 +19,8 @@
 setenv REMOVE    'rm -rf'
 setenv COPY      'cp -p'
 setenv MOVE      'mv -f'
+setenv SVN_ADD   'svn add '
+setenv SVN_CP    'svn cp '
 setenv SVN_RM    'svn rm '
 setenv SVN_MV    'svn mv'
 setenv SVN_MKDIR 'svn mkdir'
@@ -54,6 +56,7 @@
           ${DOCUMENTATION} \
           ${TEST_CODE} \
           matlab/private \
+          diagnostics/matlab/private \
           observations/forward_operators \
           observations/obs_converters
 
@@ -61,6 +64,9 @@
 echo " Making Root Directories "
 echo "=================================================================="
 
+echo "copyright" > COPYRIGHT
+${SVN_ADD} COPYRIGHT
+
 ${SVN_MKDIR}   assimilation_code
 ${SVN_MV} mkmf build_templates
 ${SVN_MKDIR}   documentation
@@ -169,18 +175,16 @@
 echo "=================================================================="
 
 set MODULE_DIR = "assimilation_code/modules/assimilation/"
-${SVN_MV} adaptive_inflate/*          $MODULE_DIR
+${SVN_MV} adaptive_inflate/*_mod.*    $MODULE_DIR
 ${SVN_MV} assim_model/*               $MODULE_DIR
-${SVN_MV} assim_tools/*               $MODULE_DIR
+${SVN_MV} assim_tools/*_mod.*         $MODULE_DIR
 ${SVN_MV} cov_cutoff/*                $MODULE_DIR
 ${SVN_MV} filter/filter_mod.*         $MODULE_DIR
 ${SVN_MV} obs_model/obs_model_mod.*   $MODULE_DIR
 ${SVN_MV} quality_control/*           $MODULE_DIR
 ${SVN_MV} reg_factor/reg_factor*      $MODULE_DIR
-${SVN_MV} reg_factor/sys_sim*         $MODULE_DIR
 ${SVN_MV} reg_factor/README           $MODULE_DIR/README_reg_factor_mod
-${SVN_MV} system_simulation/*_mod.f90 $MODULE_DIR
-${SVN_MV} system_simulation/sys_sym*  $MODULE_DIR
+${SVN_MV} system_simulation/*_mod.*   $MODULE_DIR
 ${SVN_MV} smoother/*                  $MODULE_DIR
 
 
@@ -254,9 +258,21 @@
 ${SVN_MKDIR} $SUB_DIR
 ${SVN_MV} filter/filter.*                             ${SUB_DIR}
 
+set  SUB_DIR = "${PROGRAM_DIR}/fill_inflation_restart"
+${SVN_MKDIR} $SUB_DIR
+${SVN_MV} adaptive_inflate/fill_inflation_restart.*   ${SUB_DIR}
+
+
 set  SUB_DIR = "${PROGRAM_DIR}/gen_sampling_err_table"
 ${SVN_MKDIR} $SUB_DIR
 ${SVN_MV} system_simulation/gen_sampling_err_table.*  ${SUB_DIR}
+${SVN_MKDIR}                                          ${SUB_DIR}/work
+${SVN_MV} system_simulation/work/*gen_sampling_err*   ${SUB_DIR}/work
+${SVN_CP} system_simulation/work/quickbuild.csh       ${SUB_DIR}/work
+${SVN_CP} system_simulation/work/runme.lsf            ${SUB_DIR}/work
+${SVN_MV} system_simulation/work/sampling*            ${SUB_DIR}/work
+${SVN_CP} system_simulation/work/README               ${SUB_DIR}/work
+${SVN_CP} system_simulation/work/input.nml            ${SUB_DIR}/work
 
 set  SUB_DIR = "${PROGRAM_DIR}/integrate_model"
 ${SVN_MV} integrate_model                             ${SUB_DIR}
@@ -309,13 +325,14 @@
 set  SUB_DIR = "${PROGRAM_DIR}/preprocess"
 ${SVN_MV} preprocess                                  ${SUB_DIR}
 
-set  SUB_DIR = "${PROGRAM_DIR}/reg_factor_smoother"
-${SVN_MKDIR} $SUB_DIR
-${SVN_MV} reg_factor/smoother.f90                     ${SUB_DIR}
+# set  SUB_DIR = "${PROGRAM_DIR}/reg_factor_smoother"
+# ${SVN_MKDIR} $SUB_DIR
+# ${SVN_MV} reg_factor/smoother.f90                     ${SUB_DIR}/reg_factor_smoother.f90
 
 set  SUB_DIR = "${PROGRAM_DIR}/system_simulation"
 ${SVN_MKDIR} $SUB_DIR
 ${SVN_MV} system_simulation/*                         ${SUB_DIR}
+${SVN_MV} reg_factor/sys_sim*                         ${SUB_DIR}
 
 set  SUB_DIR = "${PROGRAM_DIR}/wakeup_filter"
 ${SVN_MKDIR} $SUB_DIR
@@ -363,7 +380,6 @@
 ${SVN_MV} matlab/dbz_colors.m                      ${SUB_DIR}
 ${SVN_MV} matlab/get*.m                            ${SUB_DIR}
 ${SVN_MV} matlab/jeff_correl.m                     ${SUB_DIR}
-${SVN_MV} matlab/matching*.m                       ${SUB_DIR}
 ${SVN_MV} matlab/nc*.m                             ${SUB_DIR}
 ${SVN_MV} matlab/parse.m                           ${SUB_DIR}
 ${SVN_MV} matlab/scalebar.m                        ${SUB_DIR}