[Dart-dev] DART/branches Revision: 11514

[dart at ucar.edu]

thoar at ucar.edu
2017-04-25 12:54:09 -0600 (Tue, 25 Apr 2017)
194
Adding a couple example slurm scripts from 
William James Schouler Miller of the University of Maryland.

William used these to fire off a series of dependent jobs to
do a WRF-DART experiment.




Modified: DART/branches/rma_trunk/models/ROMS/shell_scripts/cycle.csh.template
===================================================================
--- DART/branches/rma_trunk/models/ROMS/shell_scripts/cycle.csh.template	2017-04-25 16:41:09 UTC (rev 11513)
+++ DART/branches/rma_trunk/models/ROMS/shell_scripts/cycle.csh.template	2017-04-25 18:54:09 UTC (rev 11514)
@@ -5,9 +5,7 @@
 # http://www.image.ucar.edu/DAReS/DART/DART_download
 #
 # $Id$
-#=============================================================================
 #
-#
 #=============================================================================
 # This block of directives constitutes the preamble for the LSF queuing system
 #

Added: DART/branches/rma_trunk/models/ROMS/shell_scripts/run_ensembles.slurm.csh
===================================================================
--- DART/branches/rma_trunk/models/ROMS/shell_scripts/run_ensembles.slurm.csh	                        (rev 0)
+++ DART/branches/rma_trunk/models/ROMS/shell_scripts/run_ensembles.slurm.csh	2017-04-25 18:54:09 UTC (rev 11514)
@@ -0,0 +1,115 @@
+#!/bin/tcsh
+#
+# DART software - Copyright 2004 - 2013 UCAR. This open source software is
+# provided by UCAR, "as is", without charge, subject to all terms of use at
+# http://www.image.ucar.edu/DAReS/DART/DART_download
+#
+# DART $Id$
+#
+# Based on scripts to control WRF-DART provided by 
+# William James Schouler Miller of the University of Maryland.
+# Thanks William!
+#
+#==========================================================================
+#
+#  this script submits the jobs to run the WRF ensemble members 
+#
+#  this script is dependent on successful completion of Filter   
+#
+#SBATCH --array=1-60%60
+#SBATCH -n 20 
+#SBATCH --mem-per-cpu=6000
+#SBATCH -t 12:00:00
+#SBATCH --mail-type=END
+#SBATCH --mail-type=FAIL
+#SBATCH --mail-user=wmiller at atmos.umd.edu
+
+#load compiler configuration used to build DART
+module unload openmpi
+module unload gnu
+sleep 1
+module load intel/2015.0.3.032
+module load openmpi/intel/1.8.6
+
+set nprocs = 20
+
+set paramfile = init_param.csh
+source $paramfile
+#EDIT#
+  #  First determine the appropriate analysis date
+  if ( $#argv > 0 ) then
+    set initial_date   = ${1}
+    echo "submitted jobs for running ensembles initialized at $initial_date"
+  else
+    echo "please enter a date: yyyymmddhh"
+    exit
+  endif
+# initial_date is of the form yyyymmddhh
+
+cd $RUN_DIR
+
+#  Integrate ensemble members to next analysis time
+
+set NUM_ENS = 60 
+
+set n = 1
+while ( $n <= $NUM_ENS )
+
+ if ( $SLURM_ARRAY_TASK_ID == $n ) then
+
+   echo "  STARTING ENSEMBLE MEMBER $n"
+
+   set ensstring = `printf "%04d" $n`
+
+     echo `module list`
+
+     set gdate  = (`echo $initial_date 0h -g | ${DART_DIR}/models/wrf/work/advance_time`)
+     set gdatef = (`echo $initial_date ${ASSIM_INT_HOURS}h -g | ${DART_DIR}/models/wrf/work/advance_time`)
+     set wdate  =  `echo $initial_date 0h -w | ${DART_DIR}/models/wrf/work/advance_time`
+     set yyyy   = `echo $initial_date | cut -b1-4`
+     set mm     = `echo $initial_date | cut -b5-6`
+     set dd     = `echo $initial_date | cut -b7-8`
+     set hh     = `echo $initial_date | cut -b9-10`
+
+   if ( -e ${RUN_DIR}/run_ensmem_${n}.csh ) then
+     ${REMOVE} ${RUN_DIR}/run_ensmem_${n}.csh
+   endif
+   touch ${RUN_DIR}/run_ensmem_${n}.csh
+
+   cat >> ${RUN_DIR}/run_ensmem_${n}.csh << EOF
+#!/bin/csh
+