============================================================================================== V3.7.1 Compiling: WRF_EM_CORE WRFIO_NCD_LARGE_FILE_SUPPORT=1 Linux ln01 2.6.32-220.el6.x86_64 #1 SMP Wed Nov 9 08:03:13 EST 2011 x86_64 x86_64 x86_64 GNU/Linux Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on Intel(R) 64, Version 13.0.1.117 Build 20121010 Copyright (C) 1985-2012 Intel Corporation. All rights reserved. ============================================================================================== setting parallel make -j 2 ============================================================================================== The following indicate the compilers selected to build the WRF system Serial Fortran compiler (mostly for tool generation): which SFC /gpfsdata/intel/composer_xe_2013.1.117/bin/intel64/ifort Serial C compiler (mostly for tool generation): which SCC /gpfsdata/intel/composer_xe_2013.1.117/bin/intel64/icc Fortran compiler for the model source code: which FC /gpfsdata/intel/impi/4.1.0.024/intel64/bin/mpif90 Will use 'time' to report timing information C compiler for the model source code: which CC /gpfsdata/intel/impi/4.1.0.024/intel64/bin/mpicc ============================================================================================== make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " ext make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' -------------------------------------- ( cd frame ; make -i -r externals ) make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 ; \ make -j 2 FC="ifort -real-size `expr 8 \* 4` -i4 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " RANLIB="ranlib" \ CPP="/lib/cpp -P -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I. -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_FUNC -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -traditional" AR="ar" ARFLAGS="ru" ) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90' make[3]: Nothing to be done for `default'. make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf ; \ make -j 2 NETCDFPATH="/gpfsdata/apps/netcdf-intel2013" RANLIB="ranlib" CPP="/lib/cpp -P" \ CC="icc" CFLAGS="-w -O3 -ip -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE=0" \ FC="ifort -real-size `expr 8 \* 4` -i4 -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " TRADFLAG="-traditional" AR="ar" ARFLAGS="ru" ) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/ioapi_share ; \ make -i -r NATIVE_RWORDSIZE="4" RWORDSIZE="4" AR="ar" ARFLAGS="ru" ) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/ioapi_share' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/ioapi_share' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share ; \ make -j 2 CC="icc" CFLAGS="-w -O3 -ip -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE=0" RM="rm -f" RANLIB="ranlib" CPP="/lib/cpp -P" \ FC="ifort -real-size `expr 8 \* 4` -i4 -I. -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " TRADFLAG="-traditional" AR="ar" ARFLAGS="ru" archive) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share' make[4]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share' ar ru ./libio_grib_share.a io_grib_share.o get_region_center.o gridnav.o open_file.o ranlib ./libio_grib_share.a make[4]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share' make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1 ; \ make -j 2 CC="icc" CFLAGS="-w -O3 -ip -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE=0" RM="rm -f" RANLIB="ranlib" CPP="/lib/cpp -P" \ FC="ifort -real-size `expr 8 \* 4` -i4 -I. -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " TRADFLAG="-traditional" AR="ar" ARFLAGS="ru" archive) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1' Doing make archive on library subdirectory MEL_grib1 make[4]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/MEL_grib1' make[5]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/MEL_grib1' ar ru ../libio_grib1.a FTP_getfile.o apply_bitmap.o display_gribhdr.o gbyte.o grib_dec.o grib_enc.o grib_seek.o gribgetbds.o gribgetbms.o gribgetgds.o gribgetpds.o gribhdr2file.o gribputbds.o gribputgds.o gribputpds.o hdr_print.o init_dec_struct.o init_enc_struct.o init_gribhdr.o init_struct.o ld_dec_lookup.o ld_enc_input.o ld_enc_lookup.o ld_grib_origctrs.o make_default_grbfn.o make_grib_log.o map_lvl.o map_parm.o pack_spatial.o prt_inp_struct.o upd_child_errmsg.o prt_badmsg.o swap.o grib_uthin.o set_bytes.o ranlib ../libio_grib1.a make[5]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/MEL_grib1' make[4]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/MEL_grib1' Doing make archive on library subdirectory grib1_util make[4]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/grib1_util' make[5]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/grib1_util' ar ru ../libio_grib1.a alloc_2d.o read_grib.o write_grib.o ranlib ../libio_grib1.a make[5]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/grib1_util' make[4]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/grib1_util' Doing make archive on library subdirectory WGRIB make[4]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/WGRIB' make[4]: Nothing to be done for `archive'. make[4]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/WGRIB' make[4]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1' ar ru ./libio_grib1.a grib1_routines.o gribmap.o io_grib1.o trim.o ranlib ./libio_grib1.a make[4]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1' make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int ; \ make -j 2 CC="mpicc -cc=icc -DMPI2_SUPPORT -DFSEEKO64_OK " RM="rm -f" RANLIB="ranlib" CPP="/lib/cpp -P" \ FC="time mpif90 -f90=ifort -real-size `expr 8 \* 4` -i4 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " FGREP="fgrep -iq" \ TRADFLAG="-traditional" AR="ar" ARFLAGS="ru" ARCHFLAGS="-DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_FUNC -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0" all ) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int' ( cd /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/fftpack/fftpack5 ; \ make -j 2 FC="ifort" FFLAGS="-real-size `expr 8 \* 4` -i4 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " RANLIB="ranlib" AR="ar" \ ARFLAGS="ru" CPP="/lib/cpp -P" CPPFLAGS="-DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_FUNC -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -I. -traditional " RM="rm -f" ) make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/fftpack/fftpack5' ar ru libfftpack.a c1f2kb.o cfft1b.o cmf3kf.o cosqb1.o costmi.o dcosq1f.o dfftb1.o mradb2.o mrfti1.o r1fgkf.o rfft2i.o sinqmi.o z1f2kf.o zfft1f.o zmf4kb.o c1f2kf.o cfft1f.o cmf4kb.o cosqf1.o d1f2kb.o dcosq1i.o dfftf1.o mradb3.o msntb1.o r4_factor.o rfftb1.o sint1b.o z1f3kb.o zfft1i.o zmf4kf.o c1f3kb.o cfft1i.o cmf4kf.o cosqmb.o d1f2kf.o dcosqb1.o dffti1.o mradb4.o msntf1.o r4_mcfti1.o rfftf1.o sint1f.o z1f3kf.o zfft2b.o zmf5kb.o c1f3kf.o cfft2b.o cmf5kb.o cosqmf.o d1f3kb.o dcosqf1.o dsint1b.o mradb5.o r1f2kb.o r4_tables.o rffti1.o sint1i.o z1f4kb.o zfft2f.o zmf5kf.o c1f4kb.o cfft2f.o cmf5kf.o cosqmi.o d1f3kf.o dcost1b.o dsint1f.o mradbg.o r1f2kf.o r8_factor.o rfftmb.o sintb1.o z1f4kf.o zfft2i.o zmfgkb.o c1f4kf.o cfft2i.o cmfgkb.o cost1b.o d1f4kb.o dcost1f.o dsint1i.o mradf2.o r1f3kb.o r8_mcfti1.o rfftmf.o sintf1.o z1f5kb.o zfftmb.o zmfgkf.o c1f5kb.o cfftmb.o cmfgkf.o cost1f.o d1f4kf.o dcost1i.o dsintb1.o mradf3.o r1f3kf.o r8_tables.o rfftmi.o sintmb.o z1f5kf.o zfftmf.o zmfm1b.o c1f5kf.o cfftmf.o cmfm1b.o cost1i.o d1f5kb.o dcostb1.o dsintf1.o mradf4.o r1f4kb.o rfft1b.o sinq1b.o sintmf.o z1fgkb.o zfftmi.o zmfm1f.o c1fgkb.o cfftmi.o cmfm1f.o costb1.o d1f5kf.o dcostf1.o mcsqb1.o mradf5.o r1f4kf.o rfft1f.o sinq1f.o sintmi.o z1fgkf.o zmf2kb.o c1fgkf.o cmf2kb.o cosq1b.o costf1.o d1fgkb.o dfft1b.o mcsqf1.o mradfg.o r1f5kb.o rfft1i.o sinq1i.o xercon.o z1fm1b.o zmf2kf.o c1fm1b.o cmf2kf.o cosq1f.o costmb.o d1fgkf.o dfft1f.o mcstb1.o mrftb1.o r1f5kf.o rfft2b.o sinqmb.o xerfft.o z1fm1f.o zmf3kb.o c1fm1f.o cmf3kb.o cosq1i.o costmf.o dcosq1b.o dfft1i.o mcstf1.o mrftf1.o r1fgkb.o rfft2f.o sinqmf.o z1f2kb.o zfft1b.o zmf3kf.o ranlib libfftpack.a make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/fftpack/fftpack5' ( if [ ! -e /gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools/gen_comms.c ] ; then \ /bin/cp /gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools/gen_comms_warning /gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools/gen_comms.c ; \ cat /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/RSL_LITE/gen_comms.c >> /gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools/gen_comms.c ; fi ) ( if [ ! -e module_dm.F ] ; then /bin/cp module_dm_warning module_dm.F ; \ cat /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/RSL_LITE/module_dm.F >> module_dm.F ; fi ) make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame' make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " toolsdir make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' -------------------------------------- ( cd tools ; make -i -r CC_TOOLS_CFLAGS="-DNMM_CORE=0" CC_TOOLS="icc -DIWORDSIZE=4 -DMAX_HISTORY=25" ) make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools' make[2]: `registry' is up to date. make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools' make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' /bin/rm -f main/libwrflib.a main/libwrflib.lib make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " framework make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' -------------------------------------- ( cd frame ; make -i -r -j 2 framework; \ cd ../external/io_netcdf ; \ make -i -r NETCDFPATH="/gpfsdata/apps/netcdf-intel2013" FC="time mpif90 -f90=ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " RANLIB="ranlib" \ CPP="/lib/cpp -P" LDFLAGS=" -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -ip " TRADFLAG="-traditional" ESMF_IO_LIB_EXT="-L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time" \ LIB_LOCAL="" \ ESMF_MOD_DEPENDENCE="/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR" diffwrf; \ cd ../io_netcdf ; \ make -i -r NETCDFPATH="/gpfsdata/apps/netcdf-intel2013" FC="ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " RANLIB="ranlib" \ CPP="/lib/cpp -P" LDFLAGS=" -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -ip " TRADFLAG="-traditional" ESMF_IO_LIB_EXT="-L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time" \ LIB_LOCAL="" \ ESMF_MOD_DEPENDENCE="/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR"; \ cd ../io_pio ; \ echo SKIPPING PIO BUILD make -i -r NETCDFPATH="" FC="ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " RANLIB="ranlib" \ CPP="/lib/cpp -P" LDFLAGS=" -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -ip " TRADFLAG="-traditional" ESMF_IO_LIB_EXT="-L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time" \ LIB_LOCAL="" \ ESMF_MOD_DEPENDENCE="/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR"; \ cd ../io_int ; \ make -i -r SFC="ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " FC="ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian " RANLIB="ranlib" CPP="/lib/cpp -P -DNONSTANDARD_SYSTEM_FUNC -DWRF_USE_CLM" DM_FC="mpif90 -f90=ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian "\ TRADFLAG="-traditional" ESMF_IO_LIB_EXT="-L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time" \ ESMF_MOD_DEPENDENCE="/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR" diffwrf ; \ cd ../../frame ) make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame' ar ru ../main/libwrflib.a module_driver_constants.o module_domain_type.o module_streams.o module_domain.o module_integrate.o module_timing.o module_configure.o module_tiles.o module_machine.o module_nesting.o module_wrf_error.o module_state_description.o module_sm.o module_io.o module_comm_dm.o module_comm_dm_0.o module_comm_dm_1.o module_comm_dm_2.o module_comm_dm_3.o module_comm_dm_4.o module_comm_nesting_dm.o module_dm.o module_quilt_outbuf_ops.o module_io_quilt.o module_intermediate_nmm.o module_cpl.o module_cpl_oasis3.o module_clear_halos.o wrf_num_bytes_between.o wrf_shutdown.o wrf_debug.o libmassv.o collect_on_comm.o hires_timer.o clog.o nl_get_0_routines.o nl_get_1_routines.o nl_get_2_routines.o nl_get_3_routines.o nl_get_4_routines.o nl_get_5_routines.o nl_get_6_routines.o nl_get_7_routines.o nl_set_0_routines.o nl_set_1_routines.o nl_set_2_routines.o nl_set_3_routines.o nl_set_4_routines.o nl_set_5_routines.o nl_set_6_routines.o nl_set_7_routines.o module_alloc_space_0.o module_alloc_space_1.o module_alloc_space_2.o module_alloc_space_3.o module_alloc_space_4.o module_alloc_space_5.o module_alloc_space_6.o module_alloc_space_7.o module_alloc_space_8.o module_alloc_space_9.o ar: creating ../main/libwrflib.a ranlib ../main/libwrflib.a make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame' make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf' make[2]: `diffwrf' is up to date. make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf' make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf' make[2]: Nothing to be done for `all'. make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf' SKIPPING PIO BUILD make -i -r NETCDFPATH= FC=ifort -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian RANLIB=ranlib CPP=/lib/cpp -P LDFLAGS= -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -ip TRADFLAG=-traditional ESMF_IO_LIB_EXT=-L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time LIB_LOCAL= ESMF_MOD_DEPENDENCE=/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90/module_utility.o AR=INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int' make[2]: `diffwrf' is up to date. make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int' make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " shared make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' -------------------------------------- if [ "`echo -j 2 | sed -e 's/-j//g' -e 's/ \+//g'`" -gt "6" ] ; then \ ( cd share ; make -i -r -j 6 ) ; \ else \ ( cd share ; make -i -r -j 2 ) ; \ fi make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share' if [ 0 -eq 1 ] ; then \ make -i -r nmm_contrib ; \ ar ru ../main/libwrflib.a module_model_constants.o module_bc_time_utilities.o module_get_file_names.o module_compute_geop.o module_check_a_mundo.o module_random.o module_llxy.o module_interp_nmm.o module_interp_store.o module_MPP.o module_date_time.o module_bc.o module_io_wrf.o module_soil_pre.o module_io_domain.o module_optional_input.o solve_interface.o mediation_interp_domain.o mediation_force_domain.o mediation_feedback_domain.o start_domain.o init_modules.o set_timekeeping.o interp_fcn.o sint.o wrf_ext_write_field.o wrf_ext_read_field.o wrf_tsin.o landread.o track_driver.o track_input.o bobrand.o wrf_timeseries.o track_driver.o wrf_fddaobs_in.o mediation_nest_move.o setfeenv.o input_wrf.o output_wrf.o wrf_bdyout.o wrf_bdyin.o dfi.o mediation_integrate.o mediation_wrfmain.o ; \ else \ ar ru ../main/libwrflib.a module_model_constants.o module_bc_time_utilities.o module_get_file_names.o module_compute_geop.o module_check_a_mundo.o module_random.o module_llxy.o module_interp_nmm.o module_interp_store.o module_MPP.o module_date_time.o module_bc.o module_io_wrf.o module_soil_pre.o module_io_domain.o module_optional_input.o solve_interface.o mediation_interp_domain.o mediation_force_domain.o mediation_feedback_domain.o start_domain.o init_modules.o set_timekeeping.o interp_fcn.o sint.o wrf_ext_write_field.o wrf_ext_read_field.o wrf_tsin.o landread.o track_driver.o track_input.o bobrand.o wrf_timeseries.o track_driver.o wrf_fddaobs_in.o mediation_nest_move.o setfeenv.o input_wrf.o output_wrf.o wrf_bdyout.o wrf_bdyin.o dfi.o mediation_integrate.o mediation_wrfmain.o ; \ fi make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share' make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " physics make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' -------------------------------------- if [ 0 -eq 0 ] ; then \ ( cd phys ; make -i -r CF2=" " ) ; \ else \ ( cd phys ; make -i -r CF2="../chem/module_data_mosaic_asect.o" ) ; \ fi make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys' if [ 0 -eq 1 ] ; then \ make -i -r -j 2 nmm_contrib ; \ ar ru ../main/libwrflib.a module_cam_shr_kind_mod.o module_cam_support.o module_cam_shr_const_mod.o module_cam_physconst.o module_cam_cldwat.o module_cam_wv_saturation.o module_cam_esinti.o module_cam_gffgch.o module_cam_error_function.o module_cam_constituents.o module_cam_trb_mtn_stress.o module_cam_molec_diff.o module_cam_upper_bc.o module_cam_bl_diffusion_solver.o module_cam_bl_eddy_diff.o module_cam_mp_microp_aero.o module_cam_mp_cldwat2m_micro.o module_cam_mp_ndrop.o module_cam_mp_modal_aero_initialize_data_phys.o module_cam_mp_radconstants.o module_cam_mp_conv_water.o module_cam_mp_qneg3.o module_data_cam_mam_aero.o module_data_cam_mam_asect.o module_cam_infnan.o module_bl_ysu.o module_bl_shinhong.o module_bl_mrf.o module_bl_gfs.o module_bl_gfs2011.o module_bl_myjpbl.o module_bl_qnsepbl.o module_bl_acm.o module_bl_mynn.o module_bl_fogdes.o module_bl_gwdo.o module_bl_myjurb.o module_bl_boulac.o module_bl_camuwpbl_driver.o module_bl_mfshconvpbl.o module_shcu_camuwshcu_driver.o module_shcu_camuwshcu.o module_shcu_grims.o module_cu_camzm_driver.o module_cu_camzm.o module_bl_temf.o module_bl_gbmpbl.o module_cu_g3.o module_cu_kf.o module_cu_bmj.o module_cu_kfeta.o module_cu_mskf.o module_cu_tiedtke.o module_cu_ntiedtke.o module_cu_gd.o module_cu_gf.o module_cu_nsas.o module_cu_sas.o module_cu_mesosas.o module_cu_osas.o module_cu_kfcup.o module_mp_radar.o module_mp_kessler.o module_mp_lin.o module_mp_sbu_ylin.o module_mp_wsm3.o module_mp_wsm5.o module_mp_wsm6.o module_mp_etanew.o module_mp_HWRF.o module_mp_thompson.o module_mp_full_sbm.o module_mp_fast_sbm.o module_ltng_lpi.o module_mp_gsfcgce.o module_mp_morr_two_moment.o module_mp_milbrandt2mom.o module_mp_nssl_2mom.o module_mp_wdm5.o module_mp_wdm6.o module_mp_cammgmp_driver.o module_ra_sw.o module_ra_clWRF_support.o module_ra_gsfcsw.o module_ra_goddard.o module_ra_rrtm.o module_ra_rrtmg_lw.o module_ra_rrtmg_sw.o module_ra_rrtmg_lwf.o module_ra_rrtmg_swf.o module_ra_cam_support.o module_ra_cam.o module_ra_gfdleta.o module_ra_flg.o module_ra_HWRF.o module_ra_hs.o module_ra_aerosol.o module_sf_sfclay.o module_sf_sfclayrev.o module_sf_gfs.o module_sf_gfdl.o module_sf_slab.o module_sf_noahdrv.o module_sf_noahlsm.o module_sf_clm.o module_sf_ssib.o module_sf_noah_seaice.o module_sf_noah_seaice_drv.o module_sf_noahlsm_glacial_only.o module_sf_noahmp_groundwater.o module_sf_noahmpdrv.o module_sf_noahmplsm.o module_sf_noahmp_glacier.o module_sf_urban.o module_sf_bep.o module_sf_bep_bem.o module_sf_bem.o module_sf_pxlsm.o module_sf_pxlsm_data.o module_sf_ruclsm.o module_sf_sfcdiags.o module_sf_sfcdiags_ruclsm.o module_sf_sstskin.o module_sf_tmnupdate.o module_sf_ocean_driver.o module_sf_oml.o module_sf_3dpwp.o module_sf_myjsfc.o module_sf_qnsesfc.o module_sf_mynn.o module_sf_fogdes.o module_sf_pxsfclay.o module_sf_temfsfclay.o module_sf_idealscmsfclay.o module_sf_scmflux.o module_sf_scmskintemp.o module_physics_addtendc.o module_physics_init.o module_gfs_machine.o module_gfs_funcphys.o module_gfs_physcons.o module_progtm.o module_pbl_driver.o module_data_gocart_dust.o module_cumulus_driver.o module_shallowcu_driver.o module_microphysics_driver.o module_microphysics_zero_out.o module_mixactivate.o module_radiation_driver.o module_surface_driver.o module_lightning_driver.o module_ltng_cpmpr92z.o module_ltng_crmpr92.o module_ltng_iccg.o module_fdda_psufddagd.o module_fdda_spnudging.o module_fddagd_driver.o module_fddaobs_rtfdda.o module_fddaobs_driver.o module_wind_fitch.o module_sf_lake.o module_diagnostics_driver.o \ \ module_diag_refl.o ; \ else \ make -i -r -j 2 non_nmm ; \ ar ru ../main/libwrflib.a module_cam_shr_kind_mod.o module_cam_support.o module_cam_shr_const_mod.o module_cam_physconst.o module_cam_cldwat.o module_cam_wv_saturation.o module_cam_esinti.o module_cam_gffgch.o module_cam_error_function.o module_cam_constituents.o module_cam_trb_mtn_stress.o module_cam_molec_diff.o module_cam_upper_bc.o module_cam_bl_diffusion_solver.o module_cam_bl_eddy_diff.o module_cam_mp_microp_aero.o module_cam_mp_cldwat2m_micro.o module_cam_mp_ndrop.o module_cam_mp_modal_aero_initialize_data_phys.o module_cam_mp_radconstants.o module_cam_mp_conv_water.o module_cam_mp_qneg3.o module_data_cam_mam_aero.o module_data_cam_mam_asect.o module_cam_infnan.o module_bl_ysu.o module_bl_shinhong.o module_bl_mrf.o module_bl_gfs.o module_bl_gfs2011.o module_bl_myjpbl.o module_bl_qnsepbl.o module_bl_acm.o module_bl_mynn.o module_bl_fogdes.o module_bl_gwdo.o module_bl_myjurb.o module_bl_boulac.o module_bl_camuwpbl_driver.o module_bl_mfshconvpbl.o module_shcu_camuwshcu_driver.o module_shcu_camuwshcu.o module_shcu_grims.o module_cu_camzm_driver.o module_cu_camzm.o module_bl_temf.o module_bl_gbmpbl.o module_cu_g3.o module_cu_kf.o module_cu_bmj.o module_cu_kfeta.o module_cu_mskf.o module_cu_tiedtke.o module_cu_ntiedtke.o module_cu_gd.o module_cu_gf.o module_cu_nsas.o module_cu_sas.o module_cu_mesosas.o module_cu_osas.o module_cu_kfcup.o module_mp_radar.o module_mp_kessler.o module_mp_lin.o module_mp_sbu_ylin.o module_mp_wsm3.o module_mp_wsm5.o module_mp_wsm6.o module_mp_etanew.o module_mp_HWRF.o module_mp_thompson.o module_mp_full_sbm.o module_mp_fast_sbm.o module_ltng_lpi.o module_mp_gsfcgce.o module_mp_morr_two_moment.o module_mp_milbrandt2mom.o module_mp_nssl_2mom.o module_mp_wdm5.o module_mp_wdm6.o module_mp_cammgmp_driver.o module_ra_sw.o module_ra_clWRF_support.o module_ra_gsfcsw.o module_ra_goddard.o module_ra_rrtm.o module_ra_rrtmg_lw.o module_ra_rrtmg_sw.o module_ra_rrtmg_lwf.o module_ra_rrtmg_swf.o module_ra_cam_support.o module_ra_cam.o module_ra_gfdleta.o module_ra_flg.o module_ra_HWRF.o module_ra_hs.o module_ra_aerosol.o module_sf_sfclay.o module_sf_sfclayrev.o module_sf_gfs.o module_sf_gfdl.o module_sf_slab.o module_sf_noahdrv.o module_sf_noahlsm.o module_sf_clm.o module_sf_ssib.o module_sf_noah_seaice.o module_sf_noah_seaice_drv.o module_sf_noahlsm_glacial_only.o module_sf_noahmp_groundwater.o module_sf_noahmpdrv.o module_sf_noahmplsm.o module_sf_noahmp_glacier.o module_sf_urban.o module_sf_bep.o module_sf_bep_bem.o module_sf_bem.o module_sf_pxlsm.o module_sf_pxlsm_data.o module_sf_ruclsm.o module_sf_sfcdiags.o module_sf_sfcdiags_ruclsm.o module_sf_sstskin.o module_sf_tmnupdate.o module_sf_ocean_driver.o module_sf_oml.o module_sf_3dpwp.o module_sf_myjsfc.o module_sf_qnsesfc.o module_sf_mynn.o module_sf_fogdes.o module_sf_pxsfclay.o module_sf_temfsfclay.o module_sf_idealscmsfclay.o module_sf_scmflux.o module_sf_scmskintemp.o module_physics_addtendc.o module_physics_init.o module_gfs_machine.o module_gfs_funcphys.o module_gfs_physcons.o module_progtm.o module_pbl_driver.o module_data_gocart_dust.o module_cumulus_driver.o module_shallowcu_driver.o module_microphysics_driver.o module_microphysics_zero_out.o module_mixactivate.o module_radiation_driver.o module_surface_driver.o module_lightning_driver.o module_ltng_cpmpr92z.o module_ltng_crmpr92.o module_ltng_iccg.o module_fdda_psufddagd.o module_fdda_spnudging.o module_fddagd_driver.o module_fddaobs_rtfdda.o module_fddaobs_driver.o module_wind_fitch.o module_sf_lake.o module_diagnostics_driver.o \ module_fr_fire_driver.o module_fr_fire_driver_wrf.o module_fr_fire_atm.o module_fr_fire_model.o module_fr_fire_core.o module_fr_fire_phys.o module_fr_fire_util.o \ module_diag_afwa.o module_diag_afwa_hail.o module_diag_cl.o module_diag_misc.o module_diag_pld.o module_diag_zld.o ; \ fi make[3]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys' make[3]: Nothing to be done for `non_nmm'. make[3]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys' make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys' make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " chemics ; fi if [ 1 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " em_core ; fi make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' -------------------------------------- if [ 0 -eq 0 ] ; then \ CF= ; \ else \ CF="../chem/module_aerosols_sorgam.o ../chem/module_gocart_aerosols.o ../chem/module_mosaic_driver.o ../chem/module_input_tracer.o ../chem/module_aerosols_soa_vbs.o" ; \ fi ( cd dyn_em ; make -i -r -j 2 CF="" ) make[2]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/dyn_em' ar ru ../main/libwrflib.a module_advect_em.o module_diffusion_em.o module_small_step_em.o module_big_step_utilities_em.o module_em.o module_solvedebug_em.o module_bc_em.o module_init_utilities.o module_wps_io_arw.o module_damping_em.o module_polarfft.o module_force_scm.o module_first_rk_step_part1.o module_first_rk_step_part2.o module_avgflx_em.o module_sfs_nba.o module_convtrans_prep.o module_sfs_driver.o module_stoch.o module_after_all_rk_steps.o init_modules_em.o solve_em.o start_em.o shift_domain_em.o couple_or_uncouple_em.o nest_init_utils.o adapt_timestep_em.o interp_domain_em.o make[2]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/dyn_em' make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3' if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " nmm_core ; fi if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " exp_core ; fi if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " wrf_hydro ; fi ( cd main ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " SOLVER=em em_wrf ) make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main' ranlib libwrflib.a time mpif90 -f90=ifort -o wrf.exe -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -ip wrf.o ../main/module_wrf_top.o libwrflib.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/fftpack/fftpack5/libfftpack.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/libio_grib1.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share/libio_grib_share.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int/libwrfio_int.a -L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/RSL_LITE/librsl_lite.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame/module_internal_header_util.o /gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame/pack_utils.o -L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -lwrfio_nf -L/gpfsdata/apps/netcdf-intel2013/lib -lnetcdf 0.93user 0.64system 0:04.58elapsed 34%CPU (0avgtext+0avgdata 769808maxresident)k 0inputs+152outputs (0major+71164minor)pagefaults 0swaps make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main' ( cd run ; /bin/rm -f wrf.exe ; ln -s ../main/wrf.exe . ) if [ 0 -eq 1 ] ; then \ ( cd main ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " SOLVER=em em_wrf_SST_ESMF ) ; \ fi build started: Thu Apr 26 18:05:30 CST 2018 build completed: Thu Apr 26 18:05:47 CST 2018 -------------------------------------- ( cd chem ; make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include " SOLVER=em IDEAL_CASE=real convert_emiss ) make[1]: Entering directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem' rm -f convert_emiss.o /lib/cpp -P -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_FUNC -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -I. -traditional convert_emiss.F > convert_emiss.bb /gpfsnewhome/caoxj1/pst/WRF/WRFV3/tools/standard.exe convert_emiss.bb | /lib/cpp -P -traditional > convert_emiss.f90 rm -f convert_emiss.b convert_emiss.bb time mpif90 -f90=ifort -o convert_emiss.o -c -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -I../dyn_em -I../dyn_nmm -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/main -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/share -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/phys -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem -I/gpfsnewhome/caoxj1/pst/WRF/WRFV3/inc -I/gpfsdata/apps/netcdf-intel2013/include -real-size `expr 8 \* 4` -i4 convert_emiss.f90 convert_emiss.f90(345): error #6460: This is not a field name that is defined in the encompassing structure. [KEMIT] ALLOCATE (dumc0(ids:ide,kds:grid%kemit,jds:jde)) --------------------------------------^ convert_emiss.f90(345): error #6385: The highest data type rank permitted is INTEGER(KIND=8). [KEMIT] ALLOCATE (dumc0(ids:ide,kds:grid%kemit,jds:jde)) --------------------------------------^ convert_emiss.f90(356): error #6460: This is not a field name that is defined in the encompassing structure. [EMISS_OPT_VOL] if(config_flags%emiss_opt_vol == 1 .or. config_flags%emiss_opt_vol == 2) then ---------------------^ convert_emiss.f90(373): error #6404: This name does not have a type, and must have an explicit type. [GOCART_SIMPLE] if(config_flags%chem_opt == GOCART_SIMPLE & -------------------------------^ convert_emiss.f90(374): error #6404: This name does not have a type, and must have an explicit type. [GOCARTRACM_KPP] .or. config_flags%chem_opt == GOCARTRACM_KPP & ---------------------------------------^ convert_emiss.f90(375): error #6404: This name does not have a type, and must have an explicit type. [CHEM_VOLC] .or. config_flags%chem_opt == CHEM_VOLC & ---------------------------------------^ convert_emiss.f90(376): error #6460: This is not a field name that is defined in the encompassing structure. [DMSEMIS_OPT] .or. config_flags%dmsemis_opt == DMSGOCART & ---------------------------^ convert_emiss.f90(376): error #6404: This name does not have a type, and must have an explicit type. [DMSGOCART] .or. config_flags%dmsemis_opt == DMSGOCART & ------------------------------------------^ convert_emiss.f90(377): error #6460: This is not a field name that is defined in the encompassing structure. [DUST_OPT] .or. config_flags%dust_opt == DUSTGOCART & ---------------------------^ convert_emiss.f90(377): error #6404: This name does not have a type, and must have an explicit type. [DUSTGOCART] .or. config_flags%dust_opt == DUSTGOCART & ------------------------------------------^ convert_emiss.f90(390): error #6460: This is not a field name that is defined in the encompassing structure. [DMS_0] grid%dms_0(ips:ipe,jps:jpe) = tmp2(ips:ipe,jps:jpe) -----------^ convert_emiss.f90(390): error #6158: The structure-name is invalid or is missing. [GRID] grid%dms_0(ips:ipe,jps:jpe) = tmp2(ips:ipe,jps:jpe) ------^ convert_emiss.f90(390): internal error: Please visit 'http://www.intel.com/software/products/support' for assistance. grid%dms_0(ips:ipe,jps:jpe) = tmp2(ips:ipe,jps:jpe) ^ [ Aborting due to internal error. ] compilation aborted for convert_emiss.f90 (code 1) real 0m1.109s user 0m0.256s sys 0m0.168s make[1]: [convert_emiss.o] Error 1 (ignored) ranlib ../main/libwrflib.a time mpif90 -f90=ifort -o convert_emiss.exe -O3 -ip -fp-model precise -w -ftz -align all -fno-alias -FR -convert big_endian -ip convert_emiss.o ../main/libwrflib.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/fftpack/fftpack5/libfftpack.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib1/libio_grib1.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_grib_share/libio_grib_share.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_int/libwrfio_int.a -L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/esmf_time_f90 -lesmf_time /gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/RSL_LITE/librsl_lite.a /gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame/module_internal_header_util.o /gpfsnewhome/caoxj1/pst/WRF/WRFV3/frame/pack_utils.o -L/gpfsnewhome/caoxj1/pst/WRF/WRFV3/external/io_netcdf -lwrfio_nf -L/gpfsdata/apps/netcdf-intel2013/lib -lnetcdf ifort: error #10236: File not found: 'convert_emiss.o' 0.03user 0.05system 0:00.10elapsed 84%CPU (0avgtext+0avgdata 12464maxresident)k 0inputs+48outputs (0major+20099minor)pagefaults 0swaps make[1]: [convert_emiss] Error 1 (ignored) make[1]: Leaving directory `/gpfsnewhome/caoxj1/pst/WRF/WRFV3/chem' ( cd test/em_real ; /bin/rm -f convert_emiss.exe ; ln -s ../../chem/convert_emiss.exe . ) ( cd test/em_real ; /bin/rm -f README.namelist ; ln -s ../../run/README.namelist . ) ( cd run ; if test -f namelist.input ; then \ /bin/cp -f namelist.input namelist.input.backup ; fi ; \ /bin/rm -f namelist.input ; cp ../test/em_real/namelist.input . )