==================================================== starting compile_wkc ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ WKC - WRF-Chem/KPP coupler ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ KPP - symbolic chemistry Kinetics PreProcessor, Version 2.1 (http://www.cs.vt.edu/~asandu/Software/KPP) KPP is distributed under GPL, the general public licence (http://www.gnu.org/copyleft/gpl.html) (C) 1995-1997, V. Damian & A. Sandu, CGRER, Univ. Iowa (C) 1997-2003, A. Sandu, Michigan Tech (C) 2003-2005, A. Sandu, Virginia Polytechnic Institute and State University with contributions from: R. Sander, Max-Planck Institute for Chemistry, Mainz, Germany The current version of KPP was modified for WRF-Chem. ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ------------------------------------------ configure_kpp, settings: location of flex library: /usr/lib/x86_64-linux-gnu/libfl.a OMPCC = # -fopenmp CCOMP = gcc CC = $(DM_CC) -DFSEEKO64_OK DESCRIPTION = GNU ($SFC/$SCC) SCC = gcc DM_CC = mpicc -cc=$(SCC) -DMPI2_SUPPORT CC_TOOLS = $(SCC) CC="$(SCC)" CFLAGS="$(CFLAGS)" \ writing chem/KPP/configure.kpp /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3 ----------------------------------------- compile kpp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/src' /usr/bin/yacc -d scan.y gcc -O -c y.tab.c y.tab.c: In function ‘yyparse’: y.tab.c:1461:16: warning: implicit declaration of function ‘yylex’ [-Wimplicit-function-declaration] yychar = yylex (); ^~~~~ scan.y:96:7: warning: implicit declaration of function ‘CmdJacobian’ [-Wimplicit-function-declaration] { CmdJacobian( $2 ); ^~~~~~~~~~~ scan.y:99:7: warning: implicit declaration of function ‘CmdHessian’ [-Wimplicit-function-declaration] { CmdHessian( $2 ); ^~~~~~~~~~ scan.y:102:7: warning: implicit declaration of function ‘CmdStoicmat’ [-Wimplicit-function-declaration] { CmdStoicmat( $2 ); ^~~~~~~~~~~ scan.y:105:7: warning: implicit declaration of function ‘CmdDouble’ [-Wimplicit-function-declaration] { CmdDouble( $2 ); ^~~~~~~~~ scan.y:108:7: warning: implicit declaration of function ‘CmdReorder’ [-Wimplicit-function-declaration] { CmdReorder( $2 ); ^~~~~~~~~~ scan.y:111:7: warning: implicit declaration of function ‘CmdMex’ [-Wimplicit-function-declaration] { CmdMex( $2 ); ^~~~~~ scan.y:114:7: warning: implicit declaration of function ‘CmdDummyindex’ [-Wimplicit-function-declaration] { CmdDummyindex( $2 ); ^~~~~~~~~~~~~ scan.y:117:7: warning: implicit declaration of function ‘CmdEqntags’ [-Wimplicit-function-declaration] { CmdEqntags( $2 ); ^~~~~~~~~~ scan.y:120:7: warning: implicit declaration of function ‘CmdFunction’ [-Wimplicit-function-declaration] { CmdFunction( $2 ); ^~~~~~~~~~~ scan.y:123:7: warning: implicit declaration of function ‘CmdStochastic’ [-Wimplicit-function-declaration] { CmdStochastic( $2 ); ^~~~~~~~~~~~~ scan.y:154:7: warning: implicit declaration of function ‘CheckAll’ [-Wimplicit-function-declaration] { CheckAll(); } ^ scan.y:156:7: warning: implicit declaration of function ‘LookAtAll’ [-Wimplicit-function-declaration] { LookAtAll(); } ^ scan.y:158:7: warning: implicit declaration of function ‘TransportAll’ [-Wimplicit-function-declaration] { TransportAll(); } ^ scan.y:168:7: warning: implicit declaration of function ‘CmdUse’ [-Wimplicit-function-declaration] { CmdUse( $2 ); } ^~~~~~ scan.y:170:7: warning: implicit declaration of function ‘CmdLanguage’ [-Wimplicit-function-declaration] { CmdLanguage( $2 ); } ^~~~~~~~~~~ scan.y:172:7: warning: implicit declaration of function ‘DefineInitializeNbr’ [-Wimplicit-function-declaration] { DefineInitializeNbr( $2 ); } ^ ~~~~~~~ scan.y:174:7: warning: implicit declaration of function ‘DefineXGrid’ [-Wimplicit-function-declaration] { DefineXGrid( $2 ); } ^ scan.y:176:7: warning: implicit declaration of function ‘DefineYGrid’ [-Wimplicit-function-declaration] { DefineYGrid( $2 ); } ^ scan.y:178:7: warning: implicit declaration of function ‘DefineZGrid’ [-Wimplicit-function-declaration] { DefineZGrid( $2 ); } ^ scan.y:187:7: warning: implicit declaration of function ‘CmdIntegrator’ [-Wimplicit-function-declaration] { CmdIntegrator( $2 ); } ^~~~~~~~~~~~~ scan.y:189:7: warning: implicit declaration of function ‘CmdDriver’ [-Wimplicit-function-declaration] { CmdDriver( $2 ); } ^~~~~~~~~ scan.y:191:7: warning: implicit declaration of function ‘CmdRun’ [-Wimplicit-function-declaration] { CmdRun( $2 ); } ^~~~~~ scan.y:195:7: warning: implicit declaration of function ‘SparseData’ [-Wimplicit-function-declaration] { SparseData( $2 ); ^~~~~~~~~~ scan.y:198:7: warning: implicit declaration of function ‘WRFConform’ [-Wimplicit-function-declaration] { WRFConform(); ^ scan.y:251:7: warning: implicit declaration of function ‘AddUseFile’ [-Wimplicit-function-declaration] { AddUseFile( $1 ); ^ flex scan.l gcc -O -c lex.yy.c scan.l: In function ‘yylex’: scan.l:341:8: warning: implicit declaration of function ‘EqNoCase’ [-Wimplicit-function-declaration] #[^ \t\n]* { if ( EqNoCase( yytext+1, "ENDINLINE" ) ){ ^~~~~~~~ scan.l: In function ‘EqNoCase’: scan.l:414:10: warning: implicit declaration of function ‘toupper’ [-Wimplicit-function-declaration] } ^ gcc -O -c scanner.c scanner.c: In function ‘CmdFunction’: scanner.c:175:7: warning: implicit declaration of function ‘EqNoCase’ [-Wimplicit-function-declaration] if( EqNoCase( cmd, "AGGREGATE" ) ) { ^~~~~~~~ gcc -O -c scanutil.c scanutil.c: In function ‘FileName’: scanutil.c:175:11: warning: implicit declaration of function ‘isspace’ [-Wimplicit-function-declaration] if( isspace(*crtpath) ) { ^~~~~~~ gcc -O -c kpp.c kpp.c: In function ‘main’: kpp.c:540:12: warning: implicit declaration of function ‘ParseEquationFile’ [-Wimplicit-function-declaration] status = ParseEquationFile( argv[1] ); ^~~~~~~~~~~~~~~~~ kpp.c: In function ‘Postprocess’: kpp.c:472:5: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result] system( buf ); ^~~~~~~~~~~~~ gcc -O -c gen.c gen.c: In function ‘ascid’: gen.c:110:7: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] s[strlen(s)-4] = 'd'; ^~~~~~ gen.c:110:7: warning: incompatible implicit declaration of built-in function ‘strlen’ gen.c:110:7: note: include ‘’ or provide a declaration of ‘strlen’ gen.c: In function ‘GenerateGData’: gen.c:353:3: warning: implicit declaration of function ‘MATLAB_Inline’ [-Wimplicit-function-declaration] MATLAB_Inline(" %s_Parameters;",rootFileName); ^~~~~~~~~~~~~ gen.c: In function ‘GenerateMonitorData’: gen.c:463:5: warning: implicit declaration of function ‘EqnString’ [-Wimplicit-function-declaration] EqnString(i, p); ^~~~~~~~~ gen.c: In function ‘GenerateStochastic’: gen.c:841:3: warning: implicit declaration of function ‘F90_Inline’ [-Wimplicit-function-declaration] F90_Inline("\n SELECT CASE (IRCT)\n"); ^~~~~~~~~~ gen.c: In function ‘GenerateSolve’: gen.c:1852:18: warning: too many arguments for format [-Wformat-extra-args] sprintf( buf1, "KppSolve", rootFileName ); ^~~~~~~~~~ gen.c: In function ‘GenerateIntegrator’: gen.c:2246:7: warning: implicit declaration of function ‘strchr’ [-Wimplicit-function-declaration] if( strchr( integrator, '/' ) ) ^~~~~~ gen.c:2246:7: warning: incompatible implicit declaration of built-in function ‘strchr’ gen.c:2246:7: note: include ‘’ or provide a declaration of ‘strchr’ gen.c: In function ‘GenerateDriver’: gen.c:2274:7: warning: incompatible implicit declaration of built-in function ‘strchr’ if( strchr( driver, '/' ) ) ^~~~~~ gen.c:2274:7: note: include ‘’ or provide a declaration of ‘strchr’ gen.c: In function ‘EqnStr’: gen.c:2567:22: warning: zero-length gnu_printf format string [-Wformat-zero-length] sprintf(s, ""); ^~ gen.c:2573:26: warning: implicit declaration of function ‘fabs’ [-Wimplicit-function-declaration] sprintf(s, "%g", fabs(mat[spc][eq])); ^~~~ gen.c:2573:26: warning: incompatible implicit declaration of built-in function ‘fabs’ gen.c:2573:26: note: include ‘’ or provide a declaration of ‘fabs’ gen.c:2576:17: warning: incompatible implicit declaration of built-in function ‘strlen’ for (n= strlen(s) - 1; n >= 0; n--) ^~~~~~ gen.c:2576:17: note: include ‘’ or provide a declaration of ‘strlen’ gen.c:2591:11: warning: incompatible implicit declaration of built-in function ‘strlen’ if (strlen(buf)>MAX_EQNLEN/2) { /* truncate if eqn string too long */ ^~~~~~ gen.c:2591:11: note: include ‘’ or provide a declaration of ‘strlen’ gen.c:2597:10: warning: incompatible implicit declaration of built-in function ‘strlen’ return strlen(buf); ^~~~~~ gen.c:2597:10: note: include ‘’ or provide a declaration of ‘strlen’ gen.c: In function ‘EqnString’: gen.c:2624:10: warning: incompatible implicit declaration of built-in function ‘strlen’ return strlen(buf); ^~~~~~ gen.c:2624:10: note: include ‘’ or provide a declaration of ‘strlen’ gen.c: In function ‘GenerateF90Modules’: gen.c:3284:36: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=] printf("\n Unrecognized option '%s' in GenerateF90Modules\n", where); ^ gen.c: In function ‘Generate’: gen.c:3318:39: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘int’ [-Wformat=] default: printf("\n Language no '%s' unknown\n",useLang ); ^ gen.c:3462:7: warning: implicit declaration of function ‘strcmp’ [-Wimplicit-function-declaration] if( strcmp( driver, "none" ) != 0 ) ^~~~~~ gcc -O -c code.c code.c: In function ‘OpenFile’: code.c:129:5: warning: implicit declaration of function ‘FatalError’ [-Wimplicit-function-declaration] FatalError(3,"%s: Can't create file", bufname ); ^~~~~~~~~~ code.c: In function ‘FlushBuf’: code.c:196:3: warning: format not a string literal and no format arguments [-Wformat-security] fprintf( currentFile, outBuf ); ^~~~~~~ code.c: In function ‘FlushThisBuf’: code.c:208:3: warning: format not a string literal and no format arguments [-Wformat-security] fprintf( currentFile, buf ); ^~~~~~~ code.c: In function ‘IncludeFile’: code.c:242:5: warning: ignoring return value of ‘fgets’, declared with attribute warn_unused_result [-Wunused-result] fgets( line, MAX_LINE, fp ); ^~~~~~~~~~~~~~~~~~~~~~~~~~~ code.c: In function ‘IncludeCode’: code.c:307:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result] system( cmd ); ^~~~~~~~~~~~~ code.c:310:3: warning: ignoring return value of ‘system’, declared with attribute warn_unused_result [-Wunused-result] system( cmd ); ^~~~~~~~~~~~~ gcc -O -c code_c.c code_c.c: In function ‘C_Decl’: code_c.c:262:17: warning: implicit declaration of function ‘Message’ [-Wimplicit-function-declaration] Message( "Can not declare type %d", var->type ); ^~~~~~~ code_c.c: In function ‘C_DeclareConstant’: code_c.c:369:25: warning: too many arguments for format [-Wformat-extra-args] printf( "Invalid constant", var->type ); ^~~~~~~~~~~~~~~~~~ gcc -O -c code_f77.c gcc -O -c code_f90.c gcc -O -c code_matlab.c code_matlab.c: In function ‘MATLAB_FunctionBegin’: code_matlab.c:606:5: warning: implicit declaration of function ‘FatalError’ [-Wimplicit-function-declaration] FatalError(3,"%s: Can't create file", buf ); ^~~~~~~~~~ code_matlab.c:629:51: warning: implicit declaration of function ‘getcwd’ [-Wimplicit-function-declaration] WriteComment("%-20s : %s", "Working directory", getcwd(buf, 200) ); ^~~~~~ gcc -O -c debug.c gcc -O y.tab.o lex.yy.o scanner.o scanutil.o kpp.o gen.o code.o code_c.o code_f77.o code_f90.o code_matlab.o debug.o -lm -L/usr/lib/x86_64-linux-gnu -lfl -o kpp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/src' ----------------------------------------- compile the coupler gcc -I../../../../inc -c -g registry_kpp.c registry_kpp.c:16:1: warning: return type defaults to ‘int’ [-Wimplicit-int] main( int argc, char *argv[], char *env[] ) ^~~~ registry_kpp.c: In function ‘main’: registry_kpp.c:48:3: warning: implicit declaration of function ‘sym_forget’ [-Wimplicit-function-declaration] sym_forget() ; ^~~~~~~~~~ registry_kpp.c:111:3: warning: implicit declaration of function ‘init_parser’ [-Wimplicit-function-declaration] init_parser() ; ^~~~~~~~~~~ registry_kpp.c:136:8: warning: implicit declaration of function ‘pre_parse’ [-Wimplicit-function-declaration] if ( pre_parse( dir, fp_in, fp_tmp ) ) { ^~~~~~~~~ registry_kpp.c:155:3: warning: implicit declaration of function ‘check_dimspecs’ [-Wimplicit-function-declaration] check_dimspecs() ; ^~~~~~~~~~~~~~ gcc -I../../../../inc -c -g my_strtok.c gcc -I../../../../inc -c -g data.c gcc -I../../../../inc -c -g type.c gcc -I../../../../inc -c -g misc.c misc.c: In function ‘make_entries_uniq’: misc.c:434:32: warning: implicit declaration of function ‘getpid’ [-Wimplicit-function-declaration] sprintf(tempfile,"regtmp1%d",getpid()) ; ^~~~~~ misc.c: In function ‘make_upper_case’: misc.c:467:35: warning: implicit declaration of function ‘toupper’ [-Wimplicit-function-declaration] for ( p = str ; *p ; p++ ) *p = toupper(*p) ; ^~~~~~~ misc.c: In function ‘make_lower_case’: misc.c:477:35: warning: implicit declaration of function ‘tolower’ [-Wimplicit-function-declaration] for ( p = str ; *p ; p++ ) *p = tolower(*p) ; ^~~~~~~ gcc -I../../../../inc -c -g reg_parse.c reg_parse.c: In function ‘pre_parse’: reg_parse.c:229:15: warning: implicit declaration of function ‘tolower’ [-Wimplicit-function-declaration] x = tolower(tokens[F_DIMS][i]) ; ^~~~~~~ reg_parse.c:258:10: warning: format not a string literal and no format arguments [-Wformat-security] sprintf(tracers[ntracers],tokens[F_USE]) ; ^~~~~~~ gcc -I../../../../inc -c -g gen_kpp_utils.c gcc -I../../../../inc -c -g gen_kpp_mech_dr.c gcc -I../../../../inc -c -g gen_kpp_interface.c gcc -I../../../../inc -c -g get_wrf_chem_specs.c gcc -I../../../../inc -c -g get_kpp_chem_specs.c get_kpp_chem_specs.c: In function ‘get_kpp_chem_specs’: get_kpp_chem_specs.c:42:2: warning: ‘return’ with no value, in function returning non-void return; ^~~~~~ get_kpp_chem_specs.c:19:1: note: declared here get_kpp_chem_specs ( char* kpp_dirname ) ^~~~~~~~~~~~~~~~~~ gcc -I../../../../inc -c -g compare_kpp_to_species.c compare_kpp_to_species.c: In function ‘compare_kpp_to_species’: compare_kpp_to_species.c:66:32: warning: format ‘%s’ expects argument of type ‘char *’, but argument 2 has type ‘knode_t * {aka struct knode_struct *}’ [-Wformat=] printf(" ... testing %s %s\n",p1, p2 ); ^ compare_kpp_to_species.c:66:35: warning: format ‘%s’ expects argument of type ‘char *’, but argument 3 has type ‘knode_t * {aka struct knode_struct *}’ [-Wformat=] printf(" ... testing %s %s\n",p1, p2 ); ^ compare_kpp_to_species.c:146:18: warning: implicit declaration of function ‘make_upper_case’ [-Wimplicit-function-declaration] make_upper_case(wrf_name); ^~~~~~~~~~~~~~~ gcc -I../../../../inc -c -g get_wrf_radicals.c get_wrf_radicals.c: In function ‘get_wrf_radicals’: get_wrf_radicals.c:22:10: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] strcpy( q->name, "WRFC_radicals" ); ^~~~~~ get_wrf_radicals.c:22:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ get_wrf_radicals.c:22:10: note: include ‘’ or provide a declaration of ‘strcpy’ get_wrf_radicals.c:32:13: warning: implicit declaration of function ‘strncmp’ [-Wimplicit-function-declaration] if ( !strncmp( p->descrip ,"Radicals",8) ) ^~~~~~~ gcc -I../../../../inc -c -g get_wrf_jvals.c get_wrf_jvals.c: In function ‘get_wrf_jvals’: get_wrf_jvals.c:19:10: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] strcpy( q->name, "WRFC_jvals" ); ^~~~~~ get_wrf_jvals.c:19:10: warning: incompatible implicit declaration of built-in function ‘strcpy’ get_wrf_jvals.c:19:10: note: include ‘’ or provide a declaration of ‘strcpy’ get_wrf_jvals.c:29:13: warning: implicit declaration of function ‘strncmp’ [-Wimplicit-function-declaration] if ( !strncmp( p->dname ,"PHOTR",5) ) ^~~~~~~ gcc -I../../../../inc -c -g change_chem_Makefile.c change_chem_Makefile.c: In function ‘change_chem_Makefile’: change_chem_Makefile.c:48:24: warning: format not a string literal and no format arguments [-Wformat-security] fprintf(t_Makefile, inln); ^~~~ change_chem_Makefile.c:52:9: warning: implicit declaration of function ‘strncmp’ [-Wimplicit-function-declaration] if ( strncmp(inln, " module_data_sorgam_vbs",29) == 0){ ^~~~~~~ change_chem_Makefile.c:58:19: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] strcpy( kname, p1->name ); ^~~~~~ change_chem_Makefile.c:58:19: warning: incompatible implicit declaration of built-in function ‘strcpy’ change_chem_Makefile.c:58:19: note: include ‘’ or provide a declaration of ‘strcpy’ change_chem_Makefile.c:79:19: warning: incompatible implicit declaration of built-in function ‘strcpy’ strcpy( kname, p1->name ); ^~~~~~ change_chem_Makefile.c:79:19: note: include ‘’ or provide a declaration of ‘strcpy’ change_chem_Makefile.c:100:19: warning: incompatible implicit declaration of built-in function ‘strcpy’ strcpy( kname, p1->name ); ^~~~~~ change_chem_Makefile.c:100:19: note: include ‘’ or provide a declaration of ‘strcpy’ change_chem_Makefile.c:101:26: warning: implicit declaration of function ‘strlen’ [-Wimplicit-function-declaration] slen = strlen( sub_string ); ^~~~~~ change_chem_Makefile.c:101:26: warning: incompatible implicit declaration of built-in function ‘strlen’ change_chem_Makefile.c:101:26: note: include ‘’ or provide a declaration of ‘strlen’ change_chem_Makefile.c:111:18: warning: incompatible implicit declaration of built-in function ‘strlen’ slen = strlen( sub_string ); ^~~~~~ change_chem_Makefile.c:111:18: note: include ‘’ or provide a declaration of ‘strlen’ change_chem_Makefile.c:127:4: warning: implicit declaration of function ‘system’ [-Wimplicit-function-declaration] system(cp_command); ^~~~~~ gcc -I../../../../inc -c -g gen_kpp_interf_utils.c gen_kpp_interf_utils.c: In function ‘decl_jv_pointers’: gen_kpp_interf_utils.c:87:6: warning: implicit declaration of function ‘strcpy’ [-Wimplicit-function-declaration] strcpy(s1,pl->name); ^~~~~~ gen_kpp_interf_utils.c:87:6: warning: incompatible implicit declaration of built-in function ‘strcpy’ gen_kpp_interf_utils.c:87:6: note: include ‘’ or provide a declaration of ‘strcpy’ gen_kpp_interf_utils.c: In function ‘gen_map_jval’: gen_kpp_interf_utils.c:114:6: warning: incompatible implicit declaration of built-in function ‘strcpy’ strcpy(s1,pl->name); ^~~~~~ gen_kpp_interf_utils.c:114:6: note: include ‘’ or provide a declaration of ‘strcpy’ gen_kpp_interf_utils.c: In function ‘gen_map_wrf_to_kpp’: gen_kpp_interf_utils.c:148:17: warning: implicit declaration of function ‘exit’ [-Wimplicit-function-declaration] exit (0); ^~~~ gen_kpp_interf_utils.c:148:17: warning: incompatible implicit declaration of built-in function ‘exit’ gen_kpp_interf_utils.c:148:17: note: include ‘’ or provide a declaration of ‘exit’ gen_kpp_interf_utils.c: In function ‘gen_map_kpp_to_wrf’: gen_kpp_interf_utils.c:175:17: warning: incompatible implicit declaration of built-in function ‘exit’ exit (0); ^~~~ gen_kpp_interf_utils.c:175:17: note: include ‘’ or provide a declaration of ‘exit’ gen_kpp_interf_utils.c: In function ‘gen_kpp_pargs’: gen_kpp_interf_utils.c:196:19: warning: incompatible implicit declaration of built-in function ‘strcpy’ strcpy(s1,pml->name); ^~~~~~ gen_kpp_interf_utils.c:196:19: note: include ‘’ or provide a declaration of ‘strcpy’ gen_kpp_interf_utils.c: In function ‘gen_kpp_pdecl’: gen_kpp_interf_utils.c:234:19: warning: incompatible implicit declaration of built-in function ‘strcpy’ strcpy(s1,pml->name); ^~~~~~ gen_kpp_interf_utils.c:234:19: note: include ‘’ or provide a declaration of ‘strcpy’ gcc -I../../../../inc -c -g gen_kpp_args_to_Update_Rconst.c gcc -I../../../../inc -c -g gen_kpp.c gen_kpp.c: In function ‘gen_kpp’: gen_kpp.c:75:27: warning: implicit declaration of function ‘write_list_to_screen’ [-Wimplicit-function-declaration] if ( DEBUGR == 2 ) write_list_to_screen( WRFC_packs ) ; ^~~~~~~~~~~~~~~~~~~~ gen_kpp.c:115:6: warning: implicit declaration of function ‘screen_out’ [-Wimplicit-function-declaration] screen_out( ); ^~~~~~~~~~ gen_kpp.c:120:6: warning: implicit declaration of function ‘check_all’ [-Wimplicit-function-declaration] check_all ( kpp_dirname ); ^~~~~~~~~ gcc -I../../../../inc -c -g kpp_data.c gcc -I../../../../inc -c -g sym.c sym.c: In function ‘sym_init’: sym.c:73:5: warning: implicit declaration of function ‘create_ht’ [-Wimplicit-function-declaration] create_ht( &symtab ) ; ^~~~~~~~~ sym.c:77:2: warning: implicit declaration of function ‘exit’ [-Wimplicit-function-declaration] exit(1) ; ^~~~ sym.c:77:2: warning: incompatible implicit declaration of built-in function ‘exit’ sym.c:77:2: note: include ‘’ or provide a declaration of ‘exit’ sym.c: In function ‘sym_forget’: sym.c:157:7: warning: incompatible implicit declaration of built-in function ‘exit’ exit(1) ; ^~~~ sym.c:157:7: note: include ‘’ or provide a declaration of ‘exit’ gcc -I../../../../inc -c -g symtab_gen.c symtab_gen.c: In function ‘symget’: symtab_gen.c:62:13: warning: implicit declaration of function ‘hash’ [-Wimplicit-function-declaration] index = hash( name ) ; ^~~~ gcc -o registry_kpp -g registry_kpp.o my_strtok.o data.o type.o misc.o reg_parse.o gen_kpp.o get_wrf_chem_specs.o gen_kpp_mech_dr.o gen_kpp_interface.o get_kpp_chem_specs.o compare_kpp_to_species.o get_wrf_radicals.o get_wrf_jvals.o gen_kpp_utils.o change_chem_Makefile.o gen_kpp_interf_utils.o gen_kpp_args_to_Update_Rconst.o kpp_data.o sym.o symtab_gen.o compile the tuv_kpp gcc -c -g tuv_kpp.c gcc -o tuv_kpp -g tuv_kpp.o ----------------------------------------- check if Registry was touched touch run_wkc touch mod_registry.temp touch ../mechanisms/*/*.kpp ----------------------------------------- Run kpp for mechanisms in chem/KPP/mechanisms ========================================================= mechanisms/cb05_sorg_aq ln -s ../../util/Makefile_kpp mechanisms/cb05_sorg_aq/Makefile ln -s ../chem/KPP/inc/cb05_sorg_aq/extra_args_to_update_rconst_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/extra_args_update_rconst_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/extra_decls_update_rconst_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_a_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_b_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_e_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_ia_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_ib_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_ibu_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_l_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_aq/kpp_mechd_u_cb05_sorg_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cb05_sorg_aq /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cb05_sorg_aq.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - cb05_sorg_aq_Monitor KPP is generating the utility data: - cb05_sorg_aq_Util KPP is generating the global declarations: - cb05_sorg_aq_Main KPP is generating the ODE function: - cb05_sorg_aq_Function KPP is generating the ODE Jacobian: - cb05_sorg_aq_Jacobian - cb05_sorg_aq_JacobianSP KPP is generating the linear algebra routines: - cb05_sorg_aq_LinearAlgebra KPP is generating the utility functions: - cb05_sorg_aq_Util KPP is generating the rate laws: - cb05_sorg_aq_Rates KPP is generating UpdateRconstWRF (WRF conform): - cb05_sorg_aq_UpdateRconst KPP is generating the parameters: - cb05_sorg_aq_Parameters KPP is generating the global data: - cb05_sorg_aq_Global KPP is generating the driver from general.f90: - cb05_sorg_aq_Main KPP is starting the code post-processing. KPP has succesfully created the model "cb05_sorg_aq". cp -f cb05_sorg_aq_Integrator.f90 ../../../module_kpp_cb05_sorg_aq_Integr.F cp -f cb05_sorg_aq_Parameters.f90 ../../../module_kpp_cb05_sorg_aq_Parameters.F cp -f cb05_sorg_aq_Precision.f90 ../../../module_kpp_cb05_sorg_aq_Precision.F cp -f cb05_sorg_aq_JacobianSP.f90 ../../../module_kpp_cb05_sorg_aq_JacobianSP.F cp -f cb05_sorg_aq_Jacobian.f90 ../../../module_kpp_cb05_sorg_aq_Jacobian.F cp -f cb05_sorg_aq_Update_Rconst.f90 ../../../module_kpp_cb05_sorg_aq_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cb05_sorg_aq_Parameters > decomp_uses.inc echo USE cb05_sorg_aq_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cb05_sorg_aq_Precision.F ln -sf ../../../module_kpp_cb05_sorg_aq_Parameters.F ln -sf ../../../module_kpp_cb05_sorg_aq_JacobianSP.F ln -sf ../../../module_kpp_cb05_sorg_aq_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_cb05_sorg_aq_Precision.o sed -f ../../../../arch/standard.sed module_kpp_cb05_sorg_aq_Precision.F > module_kpp_cb05_sorg_aq_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cb05_sorg_aq_Precision.b > module_kpp_cb05_sorg_aq_Precision.f90 rm -f module_kpp_cb05_sorg_aq_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cb05_sorg_aq_Precision.f90 rm -f module_kpp_cb05_sorg_aq_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_cb05_sorg_aq_Parameters.F > module_kpp_cb05_sorg_aq_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cb05_sorg_aq_Parameters.b > module_kpp_cb05_sorg_aq_Parameters.f90 rm -f module_kpp_cb05_sorg_aq_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cb05_sorg_aq_Parameters.f90 rm -f module_kpp_cb05_sorg_aq_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_cb05_sorg_aq_JacobianSP.F > module_kpp_cb05_sorg_aq_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cb05_sorg_aq_JacobianSP.b > module_kpp_cb05_sorg_aq_JacobianSP.f90 rm -f module_kpp_cb05_sorg_aq_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cb05_sorg_aq_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_cb05_sorg_aq_Precision.o module_kpp_cb05_sorg_aq_Parameters.o module_kpp_cb05_sorg_aq_JacobianSP.o write_decomp.o echo cb05_sorg_aq > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: cb05_sorg_aq fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe cb05_sorg_aq integr_edit: replacing CALL cb05_sorg_aq_KppDecomp ( A, ising ) END MODULE cb05_sorg_aq_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/cb05_sorg_vbs_aq ln -s ../../util/Makefile_kpp mechanisms/cb05_sorg_vbs_aq/Makefile ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/extra_args_to_update_rconst_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/extra_args_update_rconst_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/extra_decls_update_rconst_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_a_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_b_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_e_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_ia_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_ib_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_ibu_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_l_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cb05_sorg_vbs_aq/kpp_mechd_u_cb05_sorg_vbs_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cb05_sorg_vbs_aq /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cb05_sorg_vbs_aq.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - cb05_sorg_vbs_aq_Monitor KPP is generating the utility data: - cb05_sorg_vbs_aq_Util KPP is generating the global declarations: - cb05_sorg_vbs_aq_Main KPP is generating the ODE function: - cb05_sorg_vbs_aq_Function KPP is generating the ODE Jacobian: - cb05_sorg_vbs_aq_Jacobian - cb05_sorg_vbs_aq_JacobianSP KPP is generating the linear algebra routines: - cb05_sorg_vbs_aq_LinearAlgebra KPP is generating the utility functions: - cb05_sorg_vbs_aq_Util KPP is generating the rate laws: - cb05_sorg_vbs_aq_Rates KPP is generating UpdateRconstWRF (WRF conform): - cb05_sorg_vbs_aq_UpdateRconst KPP is generating the parameters: - cb05_sorg_vbs_aq_Parameters KPP is generating the global data: - cb05_sorg_vbs_aq_Global KPP is generating the driver from general.f90: - cb05_sorg_vbs_aq_Main KPP is starting the code post-processing. KPP has succesfully created the model "cb05_sorg_vbs_aq". cp -f cb05_sorg_vbs_aq_Integrator.f90 ../../../module_kpp_cb05_sorg_vbs_aq_Integr.F cp -f cb05_sorg_vbs_aq_Parameters.f90 ../../../module_kpp_cb05_sorg_vbs_aq_Parameters.F cp -f cb05_sorg_vbs_aq_Precision.f90 ../../../module_kpp_cb05_sorg_vbs_aq_Precision.F cp -f cb05_sorg_vbs_aq_JacobianSP.f90 ../../../module_kpp_cb05_sorg_vbs_aq_JacobianSP.F cp -f cb05_sorg_vbs_aq_Jacobian.f90 ../../../module_kpp_cb05_sorg_vbs_aq_Jacobian.F cp -f cb05_sorg_vbs_aq_Update_Rconst.f90 ../../../module_kpp_cb05_sorg_vbs_aq_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cb05_sorg_vbs_aq_Parameters > decomp_uses.inc echo USE cb05_sorg_vbs_aq_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cb05_sorg_vbs_aq_Precision.F ln -sf ../../../module_kpp_cb05_sorg_vbs_aq_Parameters.F ln -sf ../../../module_kpp_cb05_sorg_vbs_aq_JacobianSP.F ln -sf ../../../module_kpp_cb05_sorg_vbs_aq_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_cb05_sorg_vbs_aq_Precision.o sed -f ../../../../arch/standard.sed module_kpp_cb05_sorg_vbs_aq_Precision.F > module_kpp_cb05_sorg_vbs_aq_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cb05_sorg_vbs_aq_Precision.b > module_kpp_cb05_sorg_vbs_aq_Precision.f90 rm -f module_kpp_cb05_sorg_vbs_aq_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cb05_sorg_vbs_aq_Precision.f90 rm -f module_kpp_cb05_sorg_vbs_aq_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_cb05_sorg_vbs_aq_Parameters.F > module_kpp_cb05_sorg_vbs_aq_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cb05_sorg_vbs_aq_Parameters.b > module_kpp_cb05_sorg_vbs_aq_Parameters.f90 rm -f module_kpp_cb05_sorg_vbs_aq_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cb05_sorg_vbs_aq_Parameters.f90 rm -f module_kpp_cb05_sorg_vbs_aq_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_cb05_sorg_vbs_aq_JacobianSP.F > module_kpp_cb05_sorg_vbs_aq_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cb05_sorg_vbs_aq_JacobianSP.b > module_kpp_cb05_sorg_vbs_aq_JacobianSP.f90 rm -f module_kpp_cb05_sorg_vbs_aq_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cb05_sorg_vbs_aq_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_cb05_sorg_vbs_aq_Precision.o module_kpp_cb05_sorg_vbs_aq_Parameters.o module_kpp_cb05_sorg_vbs_aq_JacobianSP.o write_decomp.o echo cb05_sorg_vbs_aq > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: cb05_sorg_vbs_aq fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe cb05_sorg_vbs_aq integr_edit: replacing CALL cb05_sorg_vbs_aq_KppDecomp ( A, ising ) END MODULE cb05_sorg_vbs_aq_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/cbm4 ln -s ../../util/Makefile_kpp mechanisms/cbm4/Makefile ln -s ../chem/KPP/inc/cbm4/extra_args_to_update_rconst_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/extra_args_update_rconst_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/extra_decls_update_rconst_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_a_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_b_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_e_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_ia_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_ib_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_ibu_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_l_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbm4/kpp_mechd_u_cbm4.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cbm4 /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cbm4.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - cbm4_Monitor KPP is generating the utility data: - cbm4_Util KPP is generating the global declarations: - cbm4_Main KPP is generating the ODE function: - cbm4_Function KPP is generating the ODE Jacobian: - cbm4_Jacobian - cbm4_JacobianSP KPP is generating the linear algebra routines: - cbm4_LinearAlgebra KPP is generating the utility functions: - cbm4_Util KPP is generating the rate laws: - cbm4_Rates KPP is generating UpdateRconstWRF (WRF conform): - cbm4_UpdateRconst KPP is generating the parameters: - cbm4_Parameters KPP is generating the global data: - cbm4_Global KPP is generating the driver from general.f90: - cbm4_Main KPP is starting the code post-processing. KPP has succesfully created the model "cbm4". cp -f cbm4_Integrator.f90 ../../../module_kpp_cbm4_Integr.F cp -f cbm4_Parameters.f90 ../../../module_kpp_cbm4_Parameters.F cp -f cbm4_Precision.f90 ../../../module_kpp_cbm4_Precision.F cp -f cbm4_JacobianSP.f90 ../../../module_kpp_cbm4_JacobianSP.F cp -f cbm4_Jacobian.f90 ../../../module_kpp_cbm4_Jacobian.F cp -f cbm4_Update_Rconst.f90 ../../../module_kpp_cbm4_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cbm4_Parameters > decomp_uses.inc echo USE cbm4_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cbm4_Precision.F ln -sf ../../../module_kpp_cbm4_Parameters.F ln -sf ../../../module_kpp_cbm4_JacobianSP.F ln -sf ../../../module_kpp_cbm4_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_cbm4_Precision.o sed -f ../../../../arch/standard.sed module_kpp_cbm4_Precision.F > module_kpp_cbm4_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbm4_Precision.b > module_kpp_cbm4_Precision.f90 rm -f module_kpp_cbm4_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbm4_Precision.f90 rm -f module_kpp_cbm4_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_cbm4_Parameters.F > module_kpp_cbm4_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbm4_Parameters.b > module_kpp_cbm4_Parameters.f90 rm -f module_kpp_cbm4_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbm4_Parameters.f90 rm -f module_kpp_cbm4_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_cbm4_JacobianSP.F > module_kpp_cbm4_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbm4_JacobianSP.b > module_kpp_cbm4_JacobianSP.f90 rm -f module_kpp_cbm4_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbm4_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_cbm4_Precision.o module_kpp_cbm4_Parameters.o module_kpp_cbm4_JacobianSP.o write_decomp.o echo cbm4 > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: cbm4 fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe cbm4 integr_edit: replacing CALL cbm4_KppDecomp ( A, ising ) END MODULE cbm4_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/cbmz_bb ln -s ../../util/Makefile_kpp mechanisms/cbmz_bb/Makefile ln -s ../chem/KPP/inc/cbmz_bb/extra_args_to_update_rconst_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/extra_args_update_rconst_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/extra_decls_update_rconst_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_a_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_b_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_e_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_ia_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_ib_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_ibu_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_l_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_bb/kpp_mechd_u_cbmz_bb.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cbmz_bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cbmz_bb.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - cbmz_bb_Monitor KPP is generating the utility data: - cbmz_bb_Util KPP is generating the global declarations: - cbmz_bb_Main KPP is generating the ODE function: - cbmz_bb_Function KPP is generating the ODE Jacobian: - cbmz_bb_Jacobian - cbmz_bb_JacobianSP KPP is generating the linear algebra routines: - cbmz_bb_LinearAlgebra KPP is generating the utility functions: - cbmz_bb_Util KPP is generating the rate laws: - cbmz_bb_Rates KPP is generating UpdateRconstWRF (WRF conform): - cbmz_bb_UpdateRconst KPP is generating the parameters: - cbmz_bb_Parameters KPP is generating the global data: - cbmz_bb_Global KPP is generating the driver from general.f90: - cbmz_bb_Main KPP is starting the code post-processing. KPP has succesfully created the model "cbmz_bb". cp -f cbmz_bb_Integrator.f90 ../../../module_kpp_cbmz_bb_Integr.F cp -f cbmz_bb_Parameters.f90 ../../../module_kpp_cbmz_bb_Parameters.F cp -f cbmz_bb_Precision.f90 ../../../module_kpp_cbmz_bb_Precision.F cp -f cbmz_bb_JacobianSP.f90 ../../../module_kpp_cbmz_bb_JacobianSP.F cp -f cbmz_bb_Jacobian.f90 ../../../module_kpp_cbmz_bb_Jacobian.F cp -f cbmz_bb_Update_Rconst.f90 ../../../module_kpp_cbmz_bb_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cbmz_bb_Parameters > decomp_uses.inc echo USE cbmz_bb_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cbmz_bb_Precision.F ln -sf ../../../module_kpp_cbmz_bb_Parameters.F ln -sf ../../../module_kpp_cbmz_bb_JacobianSP.F ln -sf ../../../module_kpp_cbmz_bb_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_cbmz_bb_Precision.o sed -f ../../../../arch/standard.sed module_kpp_cbmz_bb_Precision.F > module_kpp_cbmz_bb_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbmz_bb_Precision.b > module_kpp_cbmz_bb_Precision.f90 rm -f module_kpp_cbmz_bb_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbmz_bb_Precision.f90 rm -f module_kpp_cbmz_bb_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_cbmz_bb_Parameters.F > module_kpp_cbmz_bb_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbmz_bb_Parameters.b > module_kpp_cbmz_bb_Parameters.f90 rm -f module_kpp_cbmz_bb_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbmz_bb_Parameters.f90 rm -f module_kpp_cbmz_bb_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_cbmz_bb_JacobianSP.F > module_kpp_cbmz_bb_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbmz_bb_JacobianSP.b > module_kpp_cbmz_bb_JacobianSP.f90 rm -f module_kpp_cbmz_bb_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbmz_bb_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_cbmz_bb_Precision.o module_kpp_cbmz_bb_Parameters.o module_kpp_cbmz_bb_JacobianSP.o write_decomp.o echo cbmz_bb > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: cbmz_bb fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe cbmz_bb integr_edit: replacing CALL cbmz_bb_KppDecomp ( A, ising ) END MODULE cbmz_bb_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/cbmz_mosaic ln -s ../../util/Makefile_kpp mechanisms/cbmz_mosaic/Makefile ln -s ../chem/KPP/inc/cbmz_mosaic/extra_args_to_update_rconst_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/extra_args_update_rconst_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/extra_decls_update_rconst_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_a_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_b_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_e_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_ia_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_ib_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_ibu_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_l_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cbmz_mosaic/kpp_mechd_u_cbmz_mosaic.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cbmz_mosaic /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cbmz_mosaic.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - cbmz_mosaic_Monitor KPP is generating the utility data: - cbmz_mosaic_Util KPP is generating the global declarations: - cbmz_mosaic_Main KPP is generating the ODE function: - cbmz_mosaic_Function KPP is generating the ODE Jacobian: - cbmz_mosaic_Jacobian - cbmz_mosaic_JacobianSP KPP is generating the linear algebra routines: - cbmz_mosaic_LinearAlgebra KPP is generating the utility functions: - cbmz_mosaic_Util KPP is generating the rate laws: - cbmz_mosaic_Rates KPP is generating UpdateRconstWRF (WRF conform): - cbmz_mosaic_UpdateRconst KPP is generating the parameters: - cbmz_mosaic_Parameters KPP is generating the global data: - cbmz_mosaic_Global KPP is generating the driver from general.f90: - cbmz_mosaic_Main KPP is starting the code post-processing. KPP has succesfully created the model "cbmz_mosaic". cp -f cbmz_mosaic_Integrator.f90 ../../../module_kpp_cbmz_mosaic_Integr.F cp -f cbmz_mosaic_Parameters.f90 ../../../module_kpp_cbmz_mosaic_Parameters.F cp -f cbmz_mosaic_Precision.f90 ../../../module_kpp_cbmz_mosaic_Precision.F cp -f cbmz_mosaic_JacobianSP.f90 ../../../module_kpp_cbmz_mosaic_JacobianSP.F cp -f cbmz_mosaic_Jacobian.f90 ../../../module_kpp_cbmz_mosaic_Jacobian.F cp -f cbmz_mosaic_Update_Rconst.f90 ../../../module_kpp_cbmz_mosaic_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cbmz_mosaic_Parameters > decomp_uses.inc echo USE cbmz_mosaic_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cbmz_mosaic_Precision.F ln -sf ../../../module_kpp_cbmz_mosaic_Parameters.F ln -sf ../../../module_kpp_cbmz_mosaic_JacobianSP.F ln -sf ../../../module_kpp_cbmz_mosaic_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_cbmz_mosaic_Precision.o sed -f ../../../../arch/standard.sed module_kpp_cbmz_mosaic_Precision.F > module_kpp_cbmz_mosaic_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbmz_mosaic_Precision.b > module_kpp_cbmz_mosaic_Precision.f90 rm -f module_kpp_cbmz_mosaic_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbmz_mosaic_Precision.f90 rm -f module_kpp_cbmz_mosaic_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_cbmz_mosaic_Parameters.F > module_kpp_cbmz_mosaic_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbmz_mosaic_Parameters.b > module_kpp_cbmz_mosaic_Parameters.f90 rm -f module_kpp_cbmz_mosaic_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbmz_mosaic_Parameters.f90 rm -f module_kpp_cbmz_mosaic_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_cbmz_mosaic_JacobianSP.F > module_kpp_cbmz_mosaic_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_cbmz_mosaic_JacobianSP.b > module_kpp_cbmz_mosaic_JacobianSP.f90 rm -f module_kpp_cbmz_mosaic_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_cbmz_mosaic_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_cbmz_mosaic_Precision.o module_kpp_cbmz_mosaic_Parameters.o module_kpp_cbmz_mosaic_JacobianSP.o write_decomp.o echo cbmz_mosaic > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: cbmz_mosaic fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe cbmz_mosaic integr_edit: replacing CALL cbmz_mosaic_KppDecomp ( A, ising ) END MODULE cbmz_mosaic_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/crimech ln -s ../../util/Makefile_kpp mechanisms/crimech/Makefile ln -s ../chem/KPP/inc/crimech/extra_args_to_update_rconst_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/extra_args_update_rconst_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/extra_decls_update_rconst_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_a_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_b_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_e_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_ia_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_ib_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_ibu_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_l_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/crimech/kpp_mechd_u_crimech.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model crimech /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp crimech.kpp This is KPP-2.1. KPP is parsing the equation file.Makefile:3: recipe for target 'crimech_Integrator.f90' failed make: *** [crimech_Integrator.f90] Aborted (core dumped) WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... grep: ../../../module_kpp_crimech_Integr.F: No such file or directory Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE crimech_Parameters > decomp_uses.inc echo USE crimech_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_crimech_Precision.F ln -sf ../../../module_kpp_crimech_Parameters.F ln -sf ../../../module_kpp_crimech_JacobianSP.F ln -sf ../../../module_kpp_crimech_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' make[1]: *** No rule to make target 'module_kpp_crimech_Precision.F', needed by 'module_kpp_crimech_Precision.o'. Stop. make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:21: recipe for target 'all' failed make: *** [all] Error 2 ========================================================= mechanisms/cri_mosaic_4bin_aq ln -s ../../util/Makefile_kpp mechanisms/cri_mosaic_4bin_aq/Makefile ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/extra_args_to_update_rconst_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/extra_args_update_rconst_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/extra_decls_update_rconst_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_a_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_b_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_e_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_ia_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_ib_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_ibu_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_l_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_4bin_aq/kpp_mechd_u_cri_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cri_mosaic_4bin_aq /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cri_mosaic_4bin_aq.kpp This is KPP-2.1. KPP is parsing the equation file.Makefile:3: recipe for target 'cri_mosaic_4bin_aq_Integrator.f90' failed make: *** [cri_mosaic_4bin_aq_Integrator.f90] Aborted (core dumped) WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... grep: ../../../module_kpp_cri_mosaic_4bin_aq_Integr.F: No such file or directory Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cri_mosaic_4bin_aq_Parameters > decomp_uses.inc echo USE cri_mosaic_4bin_aq_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cri_mosaic_4bin_aq_Precision.F ln -sf ../../../module_kpp_cri_mosaic_4bin_aq_Parameters.F ln -sf ../../../module_kpp_cri_mosaic_4bin_aq_JacobianSP.F ln -sf ../../../module_kpp_cri_mosaic_4bin_aq_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' make[1]: *** No rule to make target 'module_kpp_cri_mosaic_4bin_aq_Precision.F', needed by 'module_kpp_cri_mosaic_4bin_aq_Precision.o'. Stop. make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:21: recipe for target 'all' failed make: *** [all] Error 2 ========================================================= mechanisms/cri_mosaic_8bin_aq ln -s ../../util/Makefile_kpp mechanisms/cri_mosaic_8bin_aq/Makefile ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/extra_args_to_update_rconst_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/extra_args_update_rconst_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/extra_decls_update_rconst_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_a_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_b_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_e_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_ia_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_ib_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_ibu_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_l_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/cri_mosaic_8bin_aq/kpp_mechd_u_cri_mosaic_8bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model cri_mosaic_8bin_aq /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp cri_mosaic_8bin_aq.kpp This is KPP-2.1. KPP is parsing the equation file.Makefile:3: recipe for target 'cri_mosaic_8bin_aq_Integrator.f90' failed make: *** [cri_mosaic_8bin_aq_Integrator.f90] Aborted (core dumped) WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... grep: ../../../module_kpp_cri_mosaic_8bin_aq_Integr.F: No such file or directory Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE cri_mosaic_8bin_aq_Parameters > decomp_uses.inc echo USE cri_mosaic_8bin_aq_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_cri_mosaic_8bin_aq_Precision.F ln -sf ../../../module_kpp_cri_mosaic_8bin_aq_Parameters.F ln -sf ../../../module_kpp_cri_mosaic_8bin_aq_JacobianSP.F ln -sf ../../../module_kpp_cri_mosaic_8bin_aq_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' make[1]: *** No rule to make target 'module_kpp_cri_mosaic_8bin_aq_Precision.F', needed by 'module_kpp_cri_mosaic_8bin_aq_Precision.o'. Stop. make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:21: recipe for target 'all' failed make: *** [all] Error 2 ========================================================= mechanisms/gocartracm ln -s ../../util/Makefile_kpp mechanisms/gocartracm/Makefile ln -s ../chem/KPP/inc/gocartracm/extra_args_to_update_rconst_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/extra_args_update_rconst_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/extra_decls_update_rconst_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_a_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_b_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_e_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_ia_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_ib_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_ibu_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_l_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/gocartracm/kpp_mechd_u_gocartracm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model gocartracm /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp gocartracm.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - gocartracm_Monitor KPP is generating the utility data: - gocartracm_Util KPP is generating the global declarations: - gocartracm_Main KPP is generating the ODE function: - gocartracm_Function KPP is generating the ODE Jacobian: - gocartracm_Jacobian - gocartracm_JacobianSP KPP is generating the linear algebra routines: - gocartracm_LinearAlgebra KPP is generating the utility functions: - gocartracm_Util KPP is generating the rate laws: - gocartracm_Rates KPP is generating UpdateRconstWRF (WRF conform): - gocartracm_UpdateRconst KPP is generating the parameters: - gocartracm_Parameters KPP is generating the global data: - gocartracm_Global KPP is generating the driver from general.f90: - gocartracm_Main KPP is starting the code post-processing. KPP has succesfully created the model "gocartracm". cp -f gocartracm_Integrator.f90 ../../../module_kpp_gocartracm_Integr.F cp -f gocartracm_Parameters.f90 ../../../module_kpp_gocartracm_Parameters.F cp -f gocartracm_Precision.f90 ../../../module_kpp_gocartracm_Precision.F cp -f gocartracm_JacobianSP.f90 ../../../module_kpp_gocartracm_JacobianSP.F cp -f gocartracm_Jacobian.f90 ../../../module_kpp_gocartracm_Jacobian.F cp -f gocartracm_Update_Rconst.f90 ../../../module_kpp_gocartracm_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE gocartracm_Parameters > decomp_uses.inc echo USE gocartracm_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_gocartracm_Precision.F ln -sf ../../../module_kpp_gocartracm_Parameters.F ln -sf ../../../module_kpp_gocartracm_JacobianSP.F ln -sf ../../../module_kpp_gocartracm_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_gocartracm_Precision.o sed -f ../../../../arch/standard.sed module_kpp_gocartracm_Precision.F > module_kpp_gocartracm_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_gocartracm_Precision.b > module_kpp_gocartracm_Precision.f90 rm -f module_kpp_gocartracm_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_gocartracm_Precision.f90 rm -f module_kpp_gocartracm_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_gocartracm_Parameters.F > module_kpp_gocartracm_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_gocartracm_Parameters.b > module_kpp_gocartracm_Parameters.f90 rm -f module_kpp_gocartracm_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_gocartracm_Parameters.f90 rm -f module_kpp_gocartracm_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_gocartracm_JacobianSP.F > module_kpp_gocartracm_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_gocartracm_JacobianSP.b > module_kpp_gocartracm_JacobianSP.f90 rm -f module_kpp_gocartracm_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_gocartracm_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_gocartracm_Precision.o module_kpp_gocartracm_Parameters.o module_kpp_gocartracm_JacobianSP.o write_decomp.o echo gocartracm > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: gocartracm fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe gocartracm integr_edit: replacing CALL gocartracm_KppDecomp ( A, ising ) END MODULE gocartracm_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/mozart_mosaic_4bin_aq ln -s ../../util/Makefile_kpp mechanisms/mozart_mosaic_4bin_aq/Makefile ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/extra_args_to_update_rconst_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/extra_args_update_rconst_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/extra_decls_update_rconst_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_a_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_b_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_e_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_ia_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_ib_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_ibu_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_l_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin_aq/kpp_mechd_u_mozart_mosaic_4bin_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model mozart_mosaic_4bin_aq /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp mozart_mosaic_4bin_aq.kpp This is KPP-2.1. KPP is parsing the equation file.******Makefile:3: recipe for target 'mozart_mosaic_4bin_aq_Integrator.f90' failed make: *** [mozart_mosaic_4bin_aq_Integrator.f90] Aborted (core dumped) tuv_kpp: Argument = FIRST tuv_kpp: Argument = mozart_mosaic_4bin_aq tuv_kpp: Mechanism = mozart_mosaic_4bin_aq WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... grep: ../../../module_kpp_mozart_mosaic_4bin_aq_Integr.F: No such file or directory Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE mozart_mosaic_4bin_aq_Parameters > decomp_uses.inc echo USE mozart_mosaic_4bin_aq_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_mozart_mosaic_4bin_aq_Precision.F ln -sf ../../../module_kpp_mozart_mosaic_4bin_aq_Parameters.F ln -sf ../../../module_kpp_mozart_mosaic_4bin_aq_JacobianSP.F ln -sf ../../../module_kpp_mozart_mosaic_4bin_aq_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' make[1]: *** No rule to make target 'module_kpp_mozart_mosaic_4bin_aq_Precision.F', needed by 'module_kpp_mozart_mosaic_4bin_aq_Precision.o'. Stop. make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:21: recipe for target 'all' failed make: *** [all] Error 2 ========================================================= mechanisms/mozart_mosaic_4bin ln -s ../../util/Makefile_kpp mechanisms/mozart_mosaic_4bin/Makefile ln -s ../chem/KPP/inc/mozart_mosaic_4bin/extra_args_to_update_rconst_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/extra_args_update_rconst_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/extra_decls_update_rconst_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_a_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_b_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_e_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_ia_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_ib_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_ibu_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_l_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart_mosaic_4bin/kpp_mechd_u_mozart_mosaic_4bin.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model mozart_mosaic_4bin /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp mozart_mosaic_4bin.kpp This is KPP-2.1. KPP is parsing the equation file.****** KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - mozart_mosaic_4bin_Monitor KPP is generating the utility data: - mozart_mosaic_4bin_Util KPP is generating the global declarations: - mozart_mosaic_4bin_Main KPP is generating the ODE function: - mozart_mosaic_4bin_Function KPP is generating the ODE Jacobian: - mozart_mosaic_4bin_Jacobian - mozart_mosaic_4bin_JacobianSP KPP is generating the linear algebra routines: - mozart_mosaic_4bin_LinearAlgebra KPP is generating the utility functions: - mozart_mosaic_4bin_Util KPP is generating the rate laws: - mozart_mosaic_4bin_Rates KPP is generating UpdateRconstWRF (WRF conform): - mozart_mosaic_4bin_UpdateRconst KPP is generating the parameters: - mozart_mosaic_4bin_Parameters KPP is generating the global data: - mozart_mosaic_4bin_Global KPP is generating the driver from general.f90: - mozart_mosaic_4bin_Main KPP is starting the code post-processing. KPP has succesfully created the model "mozart_mosaic_4bin". cp -f mozart_mosaic_4bin_Integrator.f90 ../../../module_kpp_mozart_mosaic_4bin_Integr.F cp -f mozart_mosaic_4bin_Parameters.f90 ../../../module_kpp_mozart_mosaic_4bin_Parameters.F cp -f mozart_mosaic_4bin_Precision.f90 ../../../module_kpp_mozart_mosaic_4bin_Precision.F cp -f mozart_mosaic_4bin_JacobianSP.f90 ../../../module_kpp_mozart_mosaic_4bin_JacobianSP.F cp -f mozart_mosaic_4bin_Jacobian.f90 ../../../module_kpp_mozart_mosaic_4bin_Jacobian.F cp -f mozart_mosaic_4bin_Update_Rconst.f90 ../../../module_kpp_mozart_mosaic_4bin_Update_Rconst.F touch ../../util/run_wkc tuv_kpp: Argument = mozart_mosaic_4bin tuv_kpp: Mechanism = mozart_mosaic_4bin WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE mozart_mosaic_4bin_Parameters > decomp_uses.inc echo USE mozart_mosaic_4bin_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_mozart_mosaic_4bin_Precision.F ln -sf ../../../module_kpp_mozart_mosaic_4bin_Parameters.F ln -sf ../../../module_kpp_mozart_mosaic_4bin_JacobianSP.F ln -sf ../../../module_kpp_mozart_mosaic_4bin_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_mozart_mosaic_4bin_Precision.o sed -f ../../../../arch/standard.sed module_kpp_mozart_mosaic_4bin_Precision.F > module_kpp_mozart_mosaic_4bin_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozart_mosaic_4bin_Precision.b > module_kpp_mozart_mosaic_4bin_Precision.f90 rm -f module_kpp_mozart_mosaic_4bin_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozart_mosaic_4bin_Precision.f90 rm -f module_kpp_mozart_mosaic_4bin_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_mozart_mosaic_4bin_Parameters.F > module_kpp_mozart_mosaic_4bin_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozart_mosaic_4bin_Parameters.b > module_kpp_mozart_mosaic_4bin_Parameters.f90 rm -f module_kpp_mozart_mosaic_4bin_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozart_mosaic_4bin_Parameters.f90 rm -f module_kpp_mozart_mosaic_4bin_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_mozart_mosaic_4bin_JacobianSP.F > module_kpp_mozart_mosaic_4bin_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozart_mosaic_4bin_JacobianSP.b > module_kpp_mozart_mosaic_4bin_JacobianSP.f90 rm -f module_kpp_mozart_mosaic_4bin_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozart_mosaic_4bin_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_mozart_mosaic_4bin_Precision.o module_kpp_mozart_mosaic_4bin_Parameters.o module_kpp_mozart_mosaic_4bin_JacobianSP.o write_decomp.o echo mozart_mosaic_4bin > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: mozart_mosaic_4bin fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe mozart_mosaic_4bin integr_edit: replacing CALL mozart_mosaic_4bin_KppDecomp ( A, ising ) END MODULE mozart_mosaic_4bin_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/mozart ln -s ../../util/Makefile_kpp mechanisms/mozart/Makefile ln -s ../chem/KPP/inc/mozart/extra_args_to_update_rconst_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/extra_args_update_rconst_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/extra_decls_update_rconst_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_a_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_b_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_e_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_ia_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_ib_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_ibu_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_l_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozart/kpp_mechd_u_mozart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model mozart /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp mozart.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - mozart_Monitor KPP is generating the utility data: - mozart_Util KPP is generating the global declarations: - mozart_Main KPP is generating the ODE function: - mozart_Function KPP is generating the ODE Jacobian: - mozart_Jacobian - mozart_JacobianSP KPP is generating the linear algebra routines: - mozart_LinearAlgebra KPP is generating the utility functions: - mozart_Util KPP is generating the rate laws: - mozart_Rates KPP is generating UpdateRconstWRF (WRF conform): - mozart_UpdateRconst KPP is generating the parameters: - mozart_Parameters KPP is generating the global data: - mozart_Global KPP is generating the driver from general.f90: - mozart_Main KPP is starting the code post-processing. KPP has succesfully created the model "mozart". cp -f mozart_Integrator.f90 ../../../module_kpp_mozart_Integr.F cp -f mozart_Parameters.f90 ../../../module_kpp_mozart_Parameters.F cp -f mozart_Precision.f90 ../../../module_kpp_mozart_Precision.F cp -f mozart_JacobianSP.f90 ../../../module_kpp_mozart_JacobianSP.F cp -f mozart_Jacobian.f90 ../../../module_kpp_mozart_Jacobian.F cp -f mozart_Update_Rconst.f90 ../../../module_kpp_mozart_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE mozart_Parameters > decomp_uses.inc echo USE mozart_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_mozart_Precision.F ln -sf ../../../module_kpp_mozart_Parameters.F ln -sf ../../../module_kpp_mozart_JacobianSP.F ln -sf ../../../module_kpp_mozart_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_mozart_Precision.o sed -f ../../../../arch/standard.sed module_kpp_mozart_Precision.F > module_kpp_mozart_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozart_Precision.b > module_kpp_mozart_Precision.f90 rm -f module_kpp_mozart_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozart_Precision.f90 rm -f module_kpp_mozart_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_mozart_Parameters.F > module_kpp_mozart_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozart_Parameters.b > module_kpp_mozart_Parameters.f90 rm -f module_kpp_mozart_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozart_Parameters.f90 rm -f module_kpp_mozart_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_mozart_JacobianSP.F > module_kpp_mozart_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozart_JacobianSP.b > module_kpp_mozart_JacobianSP.f90 rm -f module_kpp_mozart_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozart_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_mozart_Precision.o module_kpp_mozart_Parameters.o module_kpp_mozart_JacobianSP.o write_decomp.o echo mozart > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: mozart fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe mozart integr_edit: replacing CALL mozart_KppDecomp ( A, ising ) END MODULE mozart_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/mozcart ln -s ../../util/Makefile_kpp mechanisms/mozcart/Makefile ln -s ../chem/KPP/inc/mozcart/extra_args_to_update_rconst_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/extra_args_update_rconst_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/extra_decls_update_rconst_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_a_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_b_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_e_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_ia_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_ib_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_ibu_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_l_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/mozcart/kpp_mechd_u_mozcart.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model mozcart /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp mozcart.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - mozcart_Monitor KPP is generating the utility data: - mozcart_Util KPP is generating the global declarations: - mozcart_Main KPP is generating the ODE function: - mozcart_Function KPP is generating the ODE Jacobian: - mozcart_Jacobian - mozcart_JacobianSP KPP is generating the linear algebra routines: - mozcart_LinearAlgebra KPP is generating the utility functions: - mozcart_Util KPP is generating the rate laws: - mozcart_Rates KPP is generating UpdateRconstWRF (WRF conform): - mozcart_UpdateRconst KPP is generating the parameters: - mozcart_Parameters KPP is generating the global data: - mozcart_Global KPP is generating the driver from general.f90: - mozcart_Main KPP is starting the code post-processing. KPP has succesfully created the model "mozcart". cp -f mozcart_Integrator.f90 ../../../module_kpp_mozcart_Integr.F cp -f mozcart_Parameters.f90 ../../../module_kpp_mozcart_Parameters.F cp -f mozcart_Precision.f90 ../../../module_kpp_mozcart_Precision.F cp -f mozcart_JacobianSP.f90 ../../../module_kpp_mozcart_JacobianSP.F cp -f mozcart_Jacobian.f90 ../../../module_kpp_mozcart_Jacobian.F cp -f mozcart_Update_Rconst.f90 ../../../module_kpp_mozcart_Update_Rconst.F touch ../../util/run_wkc tuv_kpp: Argument = mozcart tuv_kpp: Mechanism = mozcart WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE mozcart_Parameters > decomp_uses.inc echo USE mozcart_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_mozcart_Precision.F ln -sf ../../../module_kpp_mozcart_Parameters.F ln -sf ../../../module_kpp_mozcart_JacobianSP.F ln -sf ../../../module_kpp_mozcart_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_mozcart_Precision.o sed -f ../../../../arch/standard.sed module_kpp_mozcart_Precision.F > module_kpp_mozcart_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozcart_Precision.b > module_kpp_mozcart_Precision.f90 rm -f module_kpp_mozcart_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozcart_Precision.f90 rm -f module_kpp_mozcart_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_mozcart_Parameters.F > module_kpp_mozcart_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozcart_Parameters.b > module_kpp_mozcart_Parameters.f90 rm -f module_kpp_mozcart_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozcart_Parameters.f90 rm -f module_kpp_mozcart_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_mozcart_JacobianSP.F > module_kpp_mozcart_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_mozcart_JacobianSP.b > module_kpp_mozcart_JacobianSP.f90 rm -f module_kpp_mozcart_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_mozcart_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_mozcart_Precision.o module_kpp_mozcart_Parameters.o module_kpp_mozcart_JacobianSP.o write_decomp.o echo mozcart > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: mozcart fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe mozcart integr_edit: replacing CALL mozcart_KppDecomp ( A, ising ) END MODULE mozcart_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/nmhc9 ln -s ../../util/Makefile_kpp mechanisms/nmhc9/Makefile ln -s ../chem/KPP/inc/nmhc9/extra_args_to_update_rconst_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/extra_args_update_rconst_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/extra_decls_update_rconst_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_a_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_b_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_e_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_ia_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_ib_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_ibu_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_l_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/nmhc9/kpp_mechd_u_nmhc9.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model nmhc9 /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp nmhc9.kpp This is KPP-2.1. KPP is parsing the equation file.Makefile:3: recipe for target 'nmhc9_Integrator.f90' failed make: *** [nmhc9_Integrator.f90] Aborted (core dumped) WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... grep: ../../../module_kpp_nmhc9_Integr.F: No such file or directory Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE nmhc9_Parameters > decomp_uses.inc echo USE nmhc9_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_nmhc9_Precision.F ln -sf ../../../module_kpp_nmhc9_Parameters.F ln -sf ../../../module_kpp_nmhc9_JacobianSP.F ln -sf ../../../module_kpp_nmhc9_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' make[1]: *** No rule to make target 'module_kpp_nmhc9_Precision.F', needed by 'module_kpp_nmhc9_Precision.o'. Stop. make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:21: recipe for target 'all' failed make: *** [all] Error 2 ========================================================= mechanisms/racm_esrlsorg_aqchem ln -s ../../util/Makefile_kpp mechanisms/racm_esrlsorg_aqchem/Makefile ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/extra_args_to_update_rconst_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/extra_args_update_rconst_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/extra_decls_update_rconst_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_a_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_b_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_e_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_ia_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_ib_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_ibu_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_l_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg_aqchem/kpp_mechd_u_racm_esrlsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racm_esrlsorg_aqchem /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racm_esrlsorg_aqchem.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racm_esrlsorg_aqchem_Monitor KPP is generating the utility data: - racm_esrlsorg_aqchem_Util KPP is generating the global declarations: - racm_esrlsorg_aqchem_Main KPP is generating the ODE function: - racm_esrlsorg_aqchem_Function KPP is generating the ODE Jacobian: - racm_esrlsorg_aqchem_Jacobian - racm_esrlsorg_aqchem_JacobianSP KPP is generating the linear algebra routines: - racm_esrlsorg_aqchem_LinearAlgebra KPP is generating the utility functions: - racm_esrlsorg_aqchem_Util KPP is generating the rate laws: - racm_esrlsorg_aqchem_Rates KPP is generating UpdateRconstWRF (WRF conform): - racm_esrlsorg_aqchem_UpdateRconst KPP is generating the parameters: - racm_esrlsorg_aqchem_Parameters KPP is generating the global data: - racm_esrlsorg_aqchem_Global KPP is generating the driver from general.f90: - racm_esrlsorg_aqchem_Main KPP is starting the code post-processing. KPP has succesfully created the model "racm_esrlsorg_aqchem". cp -f racm_esrlsorg_aqchem_Integrator.f90 ../../../module_kpp_racm_esrlsorg_aqchem_Integr.F cp -f racm_esrlsorg_aqchem_Parameters.f90 ../../../module_kpp_racm_esrlsorg_aqchem_Parameters.F cp -f racm_esrlsorg_aqchem_Precision.f90 ../../../module_kpp_racm_esrlsorg_aqchem_Precision.F cp -f racm_esrlsorg_aqchem_JacobianSP.f90 ../../../module_kpp_racm_esrlsorg_aqchem_JacobianSP.F cp -f racm_esrlsorg_aqchem_Jacobian.f90 ../../../module_kpp_racm_esrlsorg_aqchem_Jacobian.F cp -f racm_esrlsorg_aqchem_Update_Rconst.f90 ../../../module_kpp_racm_esrlsorg_aqchem_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racm_esrlsorg_aqchem_Parameters > decomp_uses.inc echo USE racm_esrlsorg_aqchem_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racm_esrlsorg_aqchem_Precision.F ln -sf ../../../module_kpp_racm_esrlsorg_aqchem_Parameters.F ln -sf ../../../module_kpp_racm_esrlsorg_aqchem_JacobianSP.F ln -sf ../../../module_kpp_racm_esrlsorg_aqchem_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racm_esrlsorg_aqchem_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racm_esrlsorg_aqchem_Precision.F > module_kpp_racm_esrlsorg_aqchem_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_esrlsorg_aqchem_Precision.b > module_kpp_racm_esrlsorg_aqchem_Precision.f90 rm -f module_kpp_racm_esrlsorg_aqchem_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_esrlsorg_aqchem_Precision.f90 rm -f module_kpp_racm_esrlsorg_aqchem_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racm_esrlsorg_aqchem_Parameters.F > module_kpp_racm_esrlsorg_aqchem_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_esrlsorg_aqchem_Parameters.b > module_kpp_racm_esrlsorg_aqchem_Parameters.f90 rm -f module_kpp_racm_esrlsorg_aqchem_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_esrlsorg_aqchem_Parameters.f90 rm -f module_kpp_racm_esrlsorg_aqchem_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racm_esrlsorg_aqchem_JacobianSP.F > module_kpp_racm_esrlsorg_aqchem_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_esrlsorg_aqchem_JacobianSP.b > module_kpp_racm_esrlsorg_aqchem_JacobianSP.f90 rm -f module_kpp_racm_esrlsorg_aqchem_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_esrlsorg_aqchem_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racm_esrlsorg_aqchem_Precision.o module_kpp_racm_esrlsorg_aqchem_Parameters.o module_kpp_racm_esrlsorg_aqchem_JacobianSP.o write_decomp.o echo racm_esrlsorg_aqchem > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racm_esrlsorg_aqchem fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racm_esrlsorg_aqchem integr_edit: replacing CALL racm_esrlsorg_aqchem_KppDecomp ( A, ising ) END MODULE racm_esrlsorg_aqchem_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racm_esrlsorg ln -s ../../util/Makefile_kpp mechanisms/racm_esrlsorg/Makefile ln -s ../chem/KPP/inc/racm_esrlsorg/extra_args_to_update_rconst_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/extra_args_update_rconst_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/extra_decls_update_rconst_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_a_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_b_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_e_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_ia_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_ib_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_ibu_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_l_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_esrlsorg/kpp_mechd_u_racm_esrlsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racm_esrlsorg /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racm_esrlsorg.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racm_esrlsorg_Monitor KPP is generating the utility data: - racm_esrlsorg_Util KPP is generating the global declarations: - racm_esrlsorg_Main KPP is generating the ODE function: - racm_esrlsorg_Function KPP is generating the ODE Jacobian: - racm_esrlsorg_Jacobian - racm_esrlsorg_JacobianSP KPP is generating the linear algebra routines: - racm_esrlsorg_LinearAlgebra KPP is generating the utility functions: - racm_esrlsorg_Util KPP is generating the rate laws: - racm_esrlsorg_Rates KPP is generating UpdateRconstWRF (WRF conform): - racm_esrlsorg_UpdateRconst KPP is generating the parameters: - racm_esrlsorg_Parameters KPP is generating the global data: - racm_esrlsorg_Global KPP is generating the driver from general.f90: - racm_esrlsorg_Main KPP is starting the code post-processing. KPP has succesfully created the model "racm_esrlsorg". cp -f racm_esrlsorg_Integrator.f90 ../../../module_kpp_racm_esrlsorg_Integr.F cp -f racm_esrlsorg_Parameters.f90 ../../../module_kpp_racm_esrlsorg_Parameters.F cp -f racm_esrlsorg_Precision.f90 ../../../module_kpp_racm_esrlsorg_Precision.F cp -f racm_esrlsorg_JacobianSP.f90 ../../../module_kpp_racm_esrlsorg_JacobianSP.F cp -f racm_esrlsorg_Jacobian.f90 ../../../module_kpp_racm_esrlsorg_Jacobian.F cp -f racm_esrlsorg_Update_Rconst.f90 ../../../module_kpp_racm_esrlsorg_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racm_esrlsorg_Parameters > decomp_uses.inc echo USE racm_esrlsorg_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racm_esrlsorg_Precision.F ln -sf ../../../module_kpp_racm_esrlsorg_Parameters.F ln -sf ../../../module_kpp_racm_esrlsorg_JacobianSP.F ln -sf ../../../module_kpp_racm_esrlsorg_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racm_esrlsorg_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racm_esrlsorg_Precision.F > module_kpp_racm_esrlsorg_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_esrlsorg_Precision.b > module_kpp_racm_esrlsorg_Precision.f90 rm -f module_kpp_racm_esrlsorg_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_esrlsorg_Precision.f90 rm -f module_kpp_racm_esrlsorg_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racm_esrlsorg_Parameters.F > module_kpp_racm_esrlsorg_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_esrlsorg_Parameters.b > module_kpp_racm_esrlsorg_Parameters.f90 rm -f module_kpp_racm_esrlsorg_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_esrlsorg_Parameters.f90 rm -f module_kpp_racm_esrlsorg_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racm_esrlsorg_JacobianSP.F > module_kpp_racm_esrlsorg_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_esrlsorg_JacobianSP.b > module_kpp_racm_esrlsorg_JacobianSP.f90 rm -f module_kpp_racm_esrlsorg_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_esrlsorg_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racm_esrlsorg_Precision.o module_kpp_racm_esrlsorg_Parameters.o module_kpp_racm_esrlsorg_JacobianSP.o write_decomp.o echo racm_esrlsorg > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racm_esrlsorg fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racm_esrlsorg integr_edit: replacing CALL racm_esrlsorg_KppDecomp ( A, ising ) END MODULE racm_esrlsorg_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racm_mim ln -s ../../util/Makefile_kpp mechanisms/racm_mim/Makefile ln -s ../chem/KPP/inc/racm_mim/extra_args_to_update_rconst_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/extra_args_update_rconst_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/extra_decls_update_rconst_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_a_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_b_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_e_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_ia_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_ib_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_ibu_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_l_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_mim/kpp_mechd_u_racm_mim.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racm_mim /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racm_mim.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racm_mim_Monitor KPP is generating the utility data: - racm_mim_Util KPP is generating the global declarations: - racm_mim_Main KPP is generating the ODE function: - racm_mim_Function KPP is generating the ODE Jacobian: - racm_mim_Jacobian - racm_mim_JacobianSP KPP is generating the linear algebra routines: - racm_mim_LinearAlgebra KPP is generating the utility functions: - racm_mim_Util KPP is generating the rate laws: - racm_mim_Rates KPP is generating UpdateRconstWRF (WRF conform): - racm_mim_UpdateRconst KPP is generating the parameters: - racm_mim_Parameters KPP is generating the global data: - racm_mim_Global KPP is generating the driver from general.f90: - racm_mim_Main KPP is starting the code post-processing. KPP has succesfully created the model "racm_mim". cp -f racm_mim_Integrator.f90 ../../../module_kpp_racm_mim_Integr.F cp -f racm_mim_Parameters.f90 ../../../module_kpp_racm_mim_Parameters.F cp -f racm_mim_Precision.f90 ../../../module_kpp_racm_mim_Precision.F cp -f racm_mim_JacobianSP.f90 ../../../module_kpp_racm_mim_JacobianSP.F cp -f racm_mim_Jacobian.f90 ../../../module_kpp_racm_mim_Jacobian.F cp -f racm_mim_Update_Rconst.f90 ../../../module_kpp_racm_mim_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racm_mim_Parameters > decomp_uses.inc echo USE racm_mim_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racm_mim_Precision.F ln -sf ../../../module_kpp_racm_mim_Parameters.F ln -sf ../../../module_kpp_racm_mim_JacobianSP.F ln -sf ../../../module_kpp_racm_mim_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racm_mim_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racm_mim_Precision.F > module_kpp_racm_mim_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_mim_Precision.b > module_kpp_racm_mim_Precision.f90 rm -f module_kpp_racm_mim_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_mim_Precision.f90 rm -f module_kpp_racm_mim_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racm_mim_Parameters.F > module_kpp_racm_mim_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_mim_Parameters.b > module_kpp_racm_mim_Parameters.f90 rm -f module_kpp_racm_mim_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_mim_Parameters.f90 rm -f module_kpp_racm_mim_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racm_mim_JacobianSP.F > module_kpp_racm_mim_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_mim_JacobianSP.b > module_kpp_racm_mim_JacobianSP.f90 rm -f module_kpp_racm_mim_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_mim_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racm_mim_Precision.o module_kpp_racm_mim_Parameters.o module_kpp_racm_mim_JacobianSP.o write_decomp.o echo racm_mim > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racm_mim fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racm_mim integr_edit: replacing CALL racm_mim_KppDecomp ( A, ising ) END MODULE racm_mim_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racmpm ln -s ../../util/Makefile_kpp mechanisms/racmpm/Makefile ln -s ../chem/KPP/inc/racmpm/extra_args_to_update_rconst_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/extra_args_update_rconst_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/extra_decls_update_rconst_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_a_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_b_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_e_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_ia_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_ib_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_ibu_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_l_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmpm/kpp_mechd_u_racmpm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racmpm /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racmpm.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racmpm_Monitor KPP is generating the utility data: - racmpm_Util KPP is generating the global declarations: - racmpm_Main KPP is generating the ODE function: - racmpm_Function KPP is generating the ODE Jacobian: - racmpm_Jacobian - racmpm_JacobianSP KPP is generating the linear algebra routines: - racmpm_LinearAlgebra KPP is generating the utility functions: - racmpm_Util KPP is generating the rate laws: - racmpm_Rates KPP is generating UpdateRconstWRF (WRF conform): - racmpm_UpdateRconst KPP is generating the parameters: - racmpm_Parameters KPP is generating the global data: - racmpm_Global KPP is generating the driver from general.f90: - racmpm_Main KPP is starting the code post-processing. KPP has succesfully created the model "racmpm". cp -f racmpm_Integrator.f90 ../../../module_kpp_racmpm_Integr.F cp -f racmpm_Parameters.f90 ../../../module_kpp_racmpm_Parameters.F cp -f racmpm_Precision.f90 ../../../module_kpp_racmpm_Precision.F cp -f racmpm_JacobianSP.f90 ../../../module_kpp_racmpm_JacobianSP.F cp -f racmpm_Jacobian.f90 ../../../module_kpp_racmpm_Jacobian.F cp -f racmpm_Update_Rconst.f90 ../../../module_kpp_racmpm_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racmpm_Parameters > decomp_uses.inc echo USE racmpm_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racmpm_Precision.F ln -sf ../../../module_kpp_racmpm_Parameters.F ln -sf ../../../module_kpp_racmpm_JacobianSP.F ln -sf ../../../module_kpp_racmpm_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racmpm_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racmpm_Precision.F > module_kpp_racmpm_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmpm_Precision.b > module_kpp_racmpm_Precision.f90 rm -f module_kpp_racmpm_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmpm_Precision.f90 rm -f module_kpp_racmpm_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racmpm_Parameters.F > module_kpp_racmpm_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmpm_Parameters.b > module_kpp_racmpm_Parameters.f90 rm -f module_kpp_racmpm_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmpm_Parameters.f90 rm -f module_kpp_racmpm_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racmpm_JacobianSP.F > module_kpp_racmpm_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmpm_JacobianSP.b > module_kpp_racmpm_JacobianSP.f90 rm -f module_kpp_racmpm_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmpm_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racmpm_Precision.o module_kpp_racmpm_Parameters.o module_kpp_racmpm_JacobianSP.o write_decomp.o echo racmpm > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racmpm fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racmpm integr_edit: replacing CALL racmpm_KppDecomp ( A, ising ) END MODULE racmpm_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racm ln -s ../../util/Makefile_kpp mechanisms/racm/Makefile ln -s ../chem/KPP/inc/racm/extra_args_to_update_rconst_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/extra_args_update_rconst_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/extra_decls_update_rconst_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_a_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_b_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_e_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_ia_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_ib_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_ibu_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_l_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm/kpp_mechd_u_racm.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racm /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racm.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racm_Monitor KPP is generating the utility data: - racm_Util KPP is generating the global declarations: - racm_Main KPP is generating the ODE function: - racm_Function KPP is generating the ODE Jacobian: - racm_Jacobian - racm_JacobianSP KPP is generating the linear algebra routines: - racm_LinearAlgebra KPP is generating the utility functions: - racm_Util KPP is generating the rate laws: - racm_Rates KPP is generating UpdateRconstWRF (WRF conform): - racm_UpdateRconst KPP is generating the parameters: - racm_Parameters KPP is generating the global data: - racm_Global KPP is generating the driver from general.f90: - racm_Main KPP is starting the code post-processing. KPP has succesfully created the model "racm". cp -f racm_Integrator.f90 ../../../module_kpp_racm_Integr.F cp -f racm_Parameters.f90 ../../../module_kpp_racm_Parameters.F cp -f racm_Precision.f90 ../../../module_kpp_racm_Precision.F cp -f racm_JacobianSP.f90 ../../../module_kpp_racm_JacobianSP.F cp -f racm_Jacobian.f90 ../../../module_kpp_racm_Jacobian.F cp -f racm_Update_Rconst.f90 ../../../module_kpp_racm_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racm_Parameters > decomp_uses.inc echo USE racm_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racm_Precision.F ln -sf ../../../module_kpp_racm_Parameters.F ln -sf ../../../module_kpp_racm_JacobianSP.F ln -sf ../../../module_kpp_racm_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racm_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racm_Precision.F > module_kpp_racm_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_Precision.b > module_kpp_racm_Precision.f90 rm -f module_kpp_racm_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_Precision.f90 rm -f module_kpp_racm_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racm_Parameters.F > module_kpp_racm_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_Parameters.b > module_kpp_racm_Parameters.f90 rm -f module_kpp_racm_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_Parameters.f90 rm -f module_kpp_racm_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racm_JacobianSP.F > module_kpp_racm_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_JacobianSP.b > module_kpp_racm_JacobianSP.f90 rm -f module_kpp_racm_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racm_Precision.o module_kpp_racm_Parameters.o module_kpp_racm_JacobianSP.o write_decomp.o echo racm > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racm fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racm integr_edit: replacing CALL racm_KppDecomp ( A, ising ) END MODULE racm_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racm_soa_vbs_aqchem ln -s ../../util/Makefile_kpp mechanisms/racm_soa_vbs_aqchem/Makefile ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/extra_args_to_update_rconst_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/extra_args_update_rconst_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/extra_decls_update_rconst_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_a_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_b_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_e_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_ia_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_ib_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_ibu_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_l_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs_aqchem/kpp_mechd_u_racm_soa_vbs_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racm_soa_vbs_aqchem /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racm_soa_vbs_aqchem.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racm_soa_vbs_aqchem_Monitor KPP is generating the utility data: - racm_soa_vbs_aqchem_Util KPP is generating the global declarations: - racm_soa_vbs_aqchem_Main KPP is generating the ODE function: - racm_soa_vbs_aqchem_Function KPP is generating the ODE Jacobian: - racm_soa_vbs_aqchem_Jacobian - racm_soa_vbs_aqchem_JacobianSP KPP is generating the linear algebra routines: - racm_soa_vbs_aqchem_LinearAlgebra KPP is generating the utility functions: - racm_soa_vbs_aqchem_Util KPP is generating the rate laws: - racm_soa_vbs_aqchem_Rates KPP is generating UpdateRconstWRF (WRF conform): - racm_soa_vbs_aqchem_UpdateRconst KPP is generating the parameters: - racm_soa_vbs_aqchem_Parameters KPP is generating the global data: - racm_soa_vbs_aqchem_Global KPP is generating the driver from general.f90: - racm_soa_vbs_aqchem_Main KPP is starting the code post-processing. KPP has succesfully created the model "racm_soa_vbs_aqchem". cp -f racm_soa_vbs_aqchem_Integrator.f90 ../../../module_kpp_racm_soa_vbs_aqchem_Integr.F cp -f racm_soa_vbs_aqchem_Parameters.f90 ../../../module_kpp_racm_soa_vbs_aqchem_Parameters.F cp -f racm_soa_vbs_aqchem_Precision.f90 ../../../module_kpp_racm_soa_vbs_aqchem_Precision.F cp -f racm_soa_vbs_aqchem_JacobianSP.f90 ../../../module_kpp_racm_soa_vbs_aqchem_JacobianSP.F cp -f racm_soa_vbs_aqchem_Jacobian.f90 ../../../module_kpp_racm_soa_vbs_aqchem_Jacobian.F cp -f racm_soa_vbs_aqchem_Update_Rconst.f90 ../../../module_kpp_racm_soa_vbs_aqchem_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racm_soa_vbs_aqchem_Parameters > decomp_uses.inc echo USE racm_soa_vbs_aqchem_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racm_soa_vbs_aqchem_Precision.F ln -sf ../../../module_kpp_racm_soa_vbs_aqchem_Parameters.F ln -sf ../../../module_kpp_racm_soa_vbs_aqchem_JacobianSP.F ln -sf ../../../module_kpp_racm_soa_vbs_aqchem_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racm_soa_vbs_aqchem_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racm_soa_vbs_aqchem_Precision.F > module_kpp_racm_soa_vbs_aqchem_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_soa_vbs_aqchem_Precision.b > module_kpp_racm_soa_vbs_aqchem_Precision.f90 rm -f module_kpp_racm_soa_vbs_aqchem_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_soa_vbs_aqchem_Precision.f90 rm -f module_kpp_racm_soa_vbs_aqchem_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racm_soa_vbs_aqchem_Parameters.F > module_kpp_racm_soa_vbs_aqchem_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_soa_vbs_aqchem_Parameters.b > module_kpp_racm_soa_vbs_aqchem_Parameters.f90 rm -f module_kpp_racm_soa_vbs_aqchem_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_soa_vbs_aqchem_Parameters.f90 rm -f module_kpp_racm_soa_vbs_aqchem_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racm_soa_vbs_aqchem_JacobianSP.F > module_kpp_racm_soa_vbs_aqchem_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_soa_vbs_aqchem_JacobianSP.b > module_kpp_racm_soa_vbs_aqchem_JacobianSP.f90 rm -f module_kpp_racm_soa_vbs_aqchem_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_soa_vbs_aqchem_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racm_soa_vbs_aqchem_Precision.o module_kpp_racm_soa_vbs_aqchem_Parameters.o module_kpp_racm_soa_vbs_aqchem_JacobianSP.o write_decomp.o echo racm_soa_vbs_aqchem > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racm_soa_vbs_aqchem fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racm_soa_vbs_aqchem integr_edit: replacing CALL racm_soa_vbs_aqchem_KppDecomp ( A, ising ) END MODULE racm_soa_vbs_aqchem_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racm_soa_vbs ln -s ../../util/Makefile_kpp mechanisms/racm_soa_vbs/Makefile ln -s ../chem/KPP/inc/racm_soa_vbs/extra_args_to_update_rconst_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/extra_args_update_rconst_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/extra_decls_update_rconst_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_a_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_b_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_e_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_ia_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_ib_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_ibu_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_l_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racm_soa_vbs/kpp_mechd_u_racm_soa_vbs.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racm_soa_vbs /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racm_soa_vbs.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racm_soa_vbs_Monitor KPP is generating the utility data: - racm_soa_vbs_Util KPP is generating the global declarations: - racm_soa_vbs_Main KPP is generating the ODE function: - racm_soa_vbs_Function KPP is generating the ODE Jacobian: - racm_soa_vbs_Jacobian - racm_soa_vbs_JacobianSP KPP is generating the linear algebra routines: - racm_soa_vbs_LinearAlgebra KPP is generating the utility functions: - racm_soa_vbs_Util KPP is generating the rate laws: - racm_soa_vbs_Rates KPP is generating UpdateRconstWRF (WRF conform): - racm_soa_vbs_UpdateRconst KPP is generating the parameters: - racm_soa_vbs_Parameters KPP is generating the global data: - racm_soa_vbs_Global KPP is generating the driver from general.f90: - racm_soa_vbs_Main KPP is starting the code post-processing. KPP has succesfully created the model "racm_soa_vbs". cp -f racm_soa_vbs_Integrator.f90 ../../../module_kpp_racm_soa_vbs_Integr.F cp -f racm_soa_vbs_Parameters.f90 ../../../module_kpp_racm_soa_vbs_Parameters.F cp -f racm_soa_vbs_Precision.f90 ../../../module_kpp_racm_soa_vbs_Precision.F cp -f racm_soa_vbs_JacobianSP.f90 ../../../module_kpp_racm_soa_vbs_JacobianSP.F cp -f racm_soa_vbs_Jacobian.f90 ../../../module_kpp_racm_soa_vbs_Jacobian.F cp -f racm_soa_vbs_Update_Rconst.f90 ../../../module_kpp_racm_soa_vbs_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racm_soa_vbs_Parameters > decomp_uses.inc echo USE racm_soa_vbs_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racm_soa_vbs_Precision.F ln -sf ../../../module_kpp_racm_soa_vbs_Parameters.F ln -sf ../../../module_kpp_racm_soa_vbs_JacobianSP.F ln -sf ../../../module_kpp_racm_soa_vbs_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racm_soa_vbs_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racm_soa_vbs_Precision.F > module_kpp_racm_soa_vbs_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_soa_vbs_Precision.b > module_kpp_racm_soa_vbs_Precision.f90 rm -f module_kpp_racm_soa_vbs_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_soa_vbs_Precision.f90 rm -f module_kpp_racm_soa_vbs_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racm_soa_vbs_Parameters.F > module_kpp_racm_soa_vbs_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_soa_vbs_Parameters.b > module_kpp_racm_soa_vbs_Parameters.f90 rm -f module_kpp_racm_soa_vbs_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_soa_vbs_Parameters.f90 rm -f module_kpp_racm_soa_vbs_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racm_soa_vbs_JacobianSP.F > module_kpp_racm_soa_vbs_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racm_soa_vbs_JacobianSP.b > module_kpp_racm_soa_vbs_JacobianSP.f90 rm -f module_kpp_racm_soa_vbs_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racm_soa_vbs_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racm_soa_vbs_Precision.o module_kpp_racm_soa_vbs_Parameters.o module_kpp_racm_soa_vbs_JacobianSP.o write_decomp.o echo racm_soa_vbs > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racm_soa_vbs fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racm_soa_vbs integr_edit: replacing CALL racm_soa_vbs_KppDecomp ( A, ising ) END MODULE racm_soa_vbs_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racmsorg_aqchem ln -s ../../util/Makefile_kpp mechanisms/racmsorg_aqchem/Makefile ln -s ../chem/KPP/inc/racmsorg_aqchem/extra_args_to_update_rconst_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/extra_args_update_rconst_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/extra_decls_update_rconst_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_a_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_b_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_e_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_ia_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_ib_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_ibu_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_l_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg_aqchem/kpp_mechd_u_racmsorg_aqchem.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racmsorg_aqchem /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racmsorg_aqchem.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racmsorg_aqchem_Monitor KPP is generating the utility data: - racmsorg_aqchem_Util KPP is generating the global declarations: - racmsorg_aqchem_Main KPP is generating the ODE function: - racmsorg_aqchem_Function KPP is generating the ODE Jacobian: - racmsorg_aqchem_Jacobian - racmsorg_aqchem_JacobianSP KPP is generating the linear algebra routines: - racmsorg_aqchem_LinearAlgebra KPP is generating the utility functions: - racmsorg_aqchem_Util KPP is generating the rate laws: - racmsorg_aqchem_Rates KPP is generating UpdateRconstWRF (WRF conform): - racmsorg_aqchem_UpdateRconst KPP is generating the parameters: - racmsorg_aqchem_Parameters KPP is generating the global data: - racmsorg_aqchem_Global KPP is generating the driver from general.f90: - racmsorg_aqchem_Main KPP is starting the code post-processing. KPP has succesfully created the model "racmsorg_aqchem". cp -f racmsorg_aqchem_Integrator.f90 ../../../module_kpp_racmsorg_aqchem_Integr.F cp -f racmsorg_aqchem_Parameters.f90 ../../../module_kpp_racmsorg_aqchem_Parameters.F cp -f racmsorg_aqchem_Precision.f90 ../../../module_kpp_racmsorg_aqchem_Precision.F cp -f racmsorg_aqchem_JacobianSP.f90 ../../../module_kpp_racmsorg_aqchem_JacobianSP.F cp -f racmsorg_aqchem_Jacobian.f90 ../../../module_kpp_racmsorg_aqchem_Jacobian.F cp -f racmsorg_aqchem_Update_Rconst.f90 ../../../module_kpp_racmsorg_aqchem_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racmsorg_aqchem_Parameters > decomp_uses.inc echo USE racmsorg_aqchem_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racmsorg_aqchem_Precision.F ln -sf ../../../module_kpp_racmsorg_aqchem_Parameters.F ln -sf ../../../module_kpp_racmsorg_aqchem_JacobianSP.F ln -sf ../../../module_kpp_racmsorg_aqchem_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racmsorg_aqchem_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racmsorg_aqchem_Precision.F > module_kpp_racmsorg_aqchem_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmsorg_aqchem_Precision.b > module_kpp_racmsorg_aqchem_Precision.f90 rm -f module_kpp_racmsorg_aqchem_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmsorg_aqchem_Precision.f90 rm -f module_kpp_racmsorg_aqchem_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racmsorg_aqchem_Parameters.F > module_kpp_racmsorg_aqchem_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmsorg_aqchem_Parameters.b > module_kpp_racmsorg_aqchem_Parameters.f90 rm -f module_kpp_racmsorg_aqchem_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmsorg_aqchem_Parameters.f90 rm -f module_kpp_racmsorg_aqchem_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racmsorg_aqchem_JacobianSP.F > module_kpp_racmsorg_aqchem_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmsorg_aqchem_JacobianSP.b > module_kpp_racmsorg_aqchem_JacobianSP.f90 rm -f module_kpp_racmsorg_aqchem_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmsorg_aqchem_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racmsorg_aqchem_Precision.o module_kpp_racmsorg_aqchem_Parameters.o module_kpp_racmsorg_aqchem_JacobianSP.o write_decomp.o echo racmsorg_aqchem > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racmsorg_aqchem fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racmsorg_aqchem integr_edit: replacing CALL racmsorg_aqchem_KppDecomp ( A, ising ) END MODULE racmsorg_aqchem_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/racmsorg ln -s ../../util/Makefile_kpp mechanisms/racmsorg/Makefile ln -s ../chem/KPP/inc/racmsorg/extra_args_to_update_rconst_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/extra_args_update_rconst_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/extra_decls_update_rconst_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_a_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_b_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_e_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_ia_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_ib_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_ibu_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_l_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/racmsorg/kpp_mechd_u_racmsorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model racmsorg /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp racmsorg.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - racmsorg_Monitor KPP is generating the utility data: - racmsorg_Util KPP is generating the global declarations: - racmsorg_Main KPP is generating the ODE function: - racmsorg_Function KPP is generating the ODE Jacobian: - racmsorg_Jacobian - racmsorg_JacobianSP KPP is generating the linear algebra routines: - racmsorg_LinearAlgebra KPP is generating the utility functions: - racmsorg_Util KPP is generating the rate laws: - racmsorg_Rates KPP is generating UpdateRconstWRF (WRF conform): - racmsorg_UpdateRconst KPP is generating the parameters: - racmsorg_Parameters KPP is generating the global data: - racmsorg_Global KPP is generating the driver from general.f90: - racmsorg_Main KPP is starting the code post-processing. KPP has succesfully created the model "racmsorg". cp -f racmsorg_Integrator.f90 ../../../module_kpp_racmsorg_Integr.F cp -f racmsorg_Parameters.f90 ../../../module_kpp_racmsorg_Parameters.F cp -f racmsorg_Precision.f90 ../../../module_kpp_racmsorg_Precision.F cp -f racmsorg_JacobianSP.f90 ../../../module_kpp_racmsorg_JacobianSP.F cp -f racmsorg_Jacobian.f90 ../../../module_kpp_racmsorg_Jacobian.F cp -f racmsorg_Update_Rconst.f90 ../../../module_kpp_racmsorg_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE racmsorg_Parameters > decomp_uses.inc echo USE racmsorg_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_racmsorg_Precision.F ln -sf ../../../module_kpp_racmsorg_Parameters.F ln -sf ../../../module_kpp_racmsorg_JacobianSP.F ln -sf ../../../module_kpp_racmsorg_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_racmsorg_Precision.o sed -f ../../../../arch/standard.sed module_kpp_racmsorg_Precision.F > module_kpp_racmsorg_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmsorg_Precision.b > module_kpp_racmsorg_Precision.f90 rm -f module_kpp_racmsorg_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmsorg_Precision.f90 rm -f module_kpp_racmsorg_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_racmsorg_Parameters.F > module_kpp_racmsorg_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmsorg_Parameters.b > module_kpp_racmsorg_Parameters.f90 rm -f module_kpp_racmsorg_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmsorg_Parameters.f90 rm -f module_kpp_racmsorg_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_racmsorg_JacobianSP.F > module_kpp_racmsorg_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_racmsorg_JacobianSP.b > module_kpp_racmsorg_JacobianSP.f90 rm -f module_kpp_racmsorg_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_racmsorg_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_racmsorg_Precision.o module_kpp_racmsorg_Parameters.o module_kpp_racmsorg_JacobianSP.o write_decomp.o echo racmsorg > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: racmsorg fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe racmsorg integr_edit: replacing CALL racmsorg_KppDecomp ( A, ising ) END MODULE racmsorg_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/radm2 ln -s ../../util/Makefile_kpp mechanisms/radm2/Makefile ln -s ../chem/KPP/inc/radm2/extra_args_to_update_rconst_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/extra_args_update_rconst_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/extra_decls_update_rconst_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_a_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_b_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_e_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_ia_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_ib_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_ibu_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_l_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2/kpp_mechd_u_radm2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model radm2 /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp radm2.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - radm2_Monitor KPP is generating the utility data: - radm2_Util KPP is generating the global declarations: - radm2_Main KPP is generating the ODE function: - radm2_Function KPP is generating the ODE Jacobian: - radm2_Jacobian - radm2_JacobianSP KPP is generating the linear algebra routines: - radm2_LinearAlgebra KPP is generating the utility functions: - radm2_Util KPP is generating the rate laws: - radm2_Rates KPP is generating UpdateRconstWRF (WRF conform): - radm2_UpdateRconst KPP is generating the parameters: - radm2_Parameters KPP is generating the global data: - radm2_Global KPP is generating the driver from general.f90: - radm2_Main KPP is starting the code post-processing. KPP has succesfully created the model "radm2". cp -f radm2_Integrator.f90 ../../../module_kpp_radm2_Integr.F cp -f radm2_Parameters.f90 ../../../module_kpp_radm2_Parameters.F cp -f radm2_Precision.f90 ../../../module_kpp_radm2_Precision.F cp -f radm2_JacobianSP.f90 ../../../module_kpp_radm2_JacobianSP.F cp -f radm2_Jacobian.f90 ../../../module_kpp_radm2_Jacobian.F cp -f radm2_Update_Rconst.f90 ../../../module_kpp_radm2_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE radm2_Parameters > decomp_uses.inc echo USE radm2_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_radm2_Precision.F ln -sf ../../../module_kpp_radm2_Parameters.F ln -sf ../../../module_kpp_radm2_JacobianSP.F ln -sf ../../../module_kpp_radm2_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_radm2_Precision.o sed -f ../../../../arch/standard.sed module_kpp_radm2_Precision.F > module_kpp_radm2_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Precision.b > module_kpp_radm2_Precision.f90 rm -f module_kpp_radm2_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_radm2_Precision.f90 rm -f module_kpp_radm2_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_radm2_Parameters.F > module_kpp_radm2_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Parameters.b > module_kpp_radm2_Parameters.f90 rm -f module_kpp_radm2_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_radm2_Parameters.f90 rm -f module_kpp_radm2_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_radm2_JacobianSP.F > module_kpp_radm2_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_JacobianSP.b > module_kpp_radm2_JacobianSP.f90 rm -f module_kpp_radm2_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_radm2_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_radm2_Precision.o module_kpp_radm2_Parameters.o module_kpp_radm2_JacobianSP.o write_decomp.o echo radm2 > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: radm2 fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe radm2 integr_edit: replacing CALL radm2_KppDecomp ( A, ising ) END MODULE radm2_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/radm2sorg ln -s ../../util/Makefile_kpp mechanisms/radm2sorg/Makefile ln -s ../chem/KPP/inc/radm2sorg/extra_args_to_update_rconst_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/extra_args_update_rconst_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/extra_decls_update_rconst_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_a_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_b_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_e_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_ia_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_ib_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_ibu_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_l_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/radm2sorg/kpp_mechd_u_radm2sorg.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model radm2sorg /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp radm2sorg.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - radm2sorg_Monitor KPP is generating the utility data: - radm2sorg_Util KPP is generating the global declarations: - radm2sorg_Main KPP is generating the ODE function: - radm2sorg_Function KPP is generating the ODE Jacobian: - radm2sorg_Jacobian - radm2sorg_JacobianSP KPP is generating the linear algebra routines: - radm2sorg_LinearAlgebra KPP is generating the utility functions: - radm2sorg_Util KPP is generating the rate laws: - radm2sorg_Rates KPP is generating UpdateRconstWRF (WRF conform): - radm2sorg_UpdateRconst KPP is generating the parameters: - radm2sorg_Parameters KPP is generating the global data: - radm2sorg_Global KPP is generating the driver from general.f90: - radm2sorg_Main KPP is starting the code post-processing. KPP has succesfully created the model "radm2sorg". cp -f radm2sorg_Integrator.f90 ../../../module_kpp_radm2sorg_Integr.F cp -f radm2sorg_Parameters.f90 ../../../module_kpp_radm2sorg_Parameters.F cp -f radm2sorg_Precision.f90 ../../../module_kpp_radm2sorg_Precision.F cp -f radm2sorg_JacobianSP.f90 ../../../module_kpp_radm2sorg_JacobianSP.F cp -f radm2sorg_Jacobian.f90 ../../../module_kpp_radm2sorg_Jacobian.F cp -f radm2sorg_Update_Rconst.f90 ../../../module_kpp_radm2sorg_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE radm2sorg_Parameters > decomp_uses.inc echo USE radm2sorg_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_radm2sorg_Precision.F ln -sf ../../../module_kpp_radm2sorg_Parameters.F ln -sf ../../../module_kpp_radm2sorg_JacobianSP.F ln -sf ../../../module_kpp_radm2sorg_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_radm2sorg_Precision.o sed -f ../../../../arch/standard.sed module_kpp_radm2sorg_Precision.F > module_kpp_radm2sorg_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2sorg_Precision.b > module_kpp_radm2sorg_Precision.f90 rm -f module_kpp_radm2sorg_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_radm2sorg_Precision.f90 rm -f module_kpp_radm2sorg_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_radm2sorg_Parameters.F > module_kpp_radm2sorg_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2sorg_Parameters.b > module_kpp_radm2sorg_Parameters.f90 rm -f module_kpp_radm2sorg_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_radm2sorg_Parameters.f90 rm -f module_kpp_radm2sorg_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_radm2sorg_JacobianSP.F > module_kpp_radm2sorg_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2sorg_JacobianSP.b > module_kpp_radm2sorg_JacobianSP.f90 rm -f module_kpp_radm2sorg_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_radm2sorg_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_radm2sorg_Precision.o module_kpp_radm2sorg_Parameters.o module_kpp_radm2sorg_JacobianSP.o write_decomp.o echo radm2sorg > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: radm2sorg fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe radm2sorg integr_edit: replacing CALL radm2sorg_KppDecomp ( A, ising ) END MODULE radm2sorg_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/saprc99_mosaic_4bin_vbs2 ln -s ../../util/Makefile_kpp mechanisms/saprc99_mosaic_4bin_vbs2/Makefile ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/extra_args_to_update_rconst_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/extra_args_update_rconst_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/extra_decls_update_rconst_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_a_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_b_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_e_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_ia_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_ib_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_ibu_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_l_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_4bin_vbs2/kpp_mechd_u_saprc99_mosaic_4bin_vbs2.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model saprc99_mosaic_4bin_vbs2 /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp saprc99_mosaic_4bin_vbs2.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - saprc99_mosaic_4bin_vbs2_Monitor KPP is generating the utility data: - saprc99_mosaic_4bin_vbs2_Util KPP is generating the global declarations: - saprc99_mosaic_4bin_vbs2_Main KPP is generating the ODE function: - saprc99_mosaic_4bin_vbs2_Function KPP is generating the ODE Jacobian: - saprc99_mosaic_4bin_vbs2_Jacobian - saprc99_mosaic_4bin_vbs2_JacobianSP KPP is generating the linear algebra routines: - saprc99_mosaic_4bin_vbs2_LinearAlgebra KPP is generating the utility functions: - saprc99_mosaic_4bin_vbs2_Util KPP is generating the rate laws: - saprc99_mosaic_4bin_vbs2_Rates KPP is generating UpdateRconstWRF (WRF conform): - saprc99_mosaic_4bin_vbs2_UpdateRconst KPP is generating the parameters: - saprc99_mosaic_4bin_vbs2_Parameters KPP is generating the global data: - saprc99_mosaic_4bin_vbs2_Global KPP is generating the driver from general.f90: - saprc99_mosaic_4bin_vbs2_Main KPP is starting the code post-processing. KPP has succesfully created the model "saprc99_mosaic_4bin_vbs2". cp -f saprc99_mosaic_4bin_vbs2_Integrator.f90 ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Integr.F cp -f saprc99_mosaic_4bin_vbs2_Parameters.f90 ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.F cp -f saprc99_mosaic_4bin_vbs2_Precision.f90 ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Precision.F cp -f saprc99_mosaic_4bin_vbs2_JacobianSP.f90 ../../../module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.F cp -f saprc99_mosaic_4bin_vbs2_Jacobian.f90 ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Jacobian.F cp -f saprc99_mosaic_4bin_vbs2_Update_Rconst.f90 ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE saprc99_mosaic_4bin_vbs2_Parameters > decomp_uses.inc echo USE saprc99_mosaic_4bin_vbs2_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Precision.F ln -sf ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.F ln -sf ../../../module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.F ln -sf ../../../module_kpp_saprc99_mosaic_4bin_vbs2_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_saprc99_mosaic_4bin_vbs2_Precision.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_mosaic_4bin_vbs2_Precision.F > module_kpp_saprc99_mosaic_4bin_vbs2_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_mosaic_4bin_vbs2_Precision.b > module_kpp_saprc99_mosaic_4bin_vbs2_Precision.f90 rm -f module_kpp_saprc99_mosaic_4bin_vbs2_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_mosaic_4bin_vbs2_Precision.f90 rm -f module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.F > module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.b > module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.f90 rm -f module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.f90 rm -f module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.F > module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.b > module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.f90 rm -f module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_saprc99_mosaic_4bin_vbs2_Precision.o module_kpp_saprc99_mosaic_4bin_vbs2_Parameters.o module_kpp_saprc99_mosaic_4bin_vbs2_JacobianSP.o write_decomp.o echo saprc99_mosaic_4bin_vbs2 > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: saprc99_mosaic_4bin_vbs2 fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe saprc99_mosaic_4bin_vbs2 integr_edit: replacing CALL saprc99_mosaic_4bin_vbs2_KppDecomp ( A, ising ) END MODULE saprc99_mosaic_4bin_vbs2_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/saprc99_mosaic_8bin_vbs2_aq ln -s ../../util/Makefile_kpp mechanisms/saprc99_mosaic_8bin_vbs2_aq/Makefile ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/extra_args_to_update_rconst_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/extra_args_update_rconst_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/extra_decls_update_rconst_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_a_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_b_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_e_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_ia_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_ib_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_ibu_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_l_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99_mosaic_8bin_vbs2_aq/kpp_mechd_u_saprc99_mosaic_8bin_vbs2_aq.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model saprc99_mosaic_8bin_vbs2_aq /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp saprc99_mosaic_8bin_vbs2_aq.kpp This is KPP-2.1. KPP is parsing the equation file.); KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - saprc99_mosaic_8bin_vbs2_aq_Monitor KPP is generating the utility data: - saprc99_mosaic_8bin_vbs2_aq_Util KPP is generating the global declarations: - saprc99_mosaic_8bin_vbs2_aq_Main KPP is generating the ODE function: - saprc99_mosaic_8bin_vbs2_aq_Function KPP is generating the ODE Jacobian: - saprc99_mosaic_8bin_vbs2_aq_Jacobian - saprc99_mosaic_8bin_vbs2_aq_JacobianSP KPP is generating the linear algebra routines: - saprc99_mosaic_8bin_vbs2_aq_LinearAlgebra KPP is generating the utility functions: - saprc99_mosaic_8bin_vbs2_aq_Util KPP is generating the rate laws: - saprc99_mosaic_8bin_vbs2_aq_Rates KPP is generating UpdateRconstWRF (WRF conform): - saprc99_mosaic_8bin_vbs2_aq_UpdateRconst KPP is generating the parameters: - saprc99_mosaic_8bin_vbs2_aq_Parameters KPP is generating the global data: - saprc99_mosaic_8bin_vbs2_aq_Global KPP is generating the driver from general.f90: - saprc99_mosaic_8bin_vbs2_aq_Main KPP is starting the code post-processing. KPP has succesfully created the model "saprc99_mosaic_8bin_vbs2_aq". cp -f saprc99_mosaic_8bin_vbs2_aq_Integrator.f90 ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Integr.F cp -f saprc99_mosaic_8bin_vbs2_aq_Parameters.f90 ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.F cp -f saprc99_mosaic_8bin_vbs2_aq_Precision.f90 ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.F cp -f saprc99_mosaic_8bin_vbs2_aq_JacobianSP.f90 ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.F cp -f saprc99_mosaic_8bin_vbs2_aq_Jacobian.f90 ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Jacobian.F cp -f saprc99_mosaic_8bin_vbs2_aq_Update_Rconst.f90 ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE saprc99_mosaic_8bin_vbs2_aq_Parameters > decomp_uses.inc echo USE saprc99_mosaic_8bin_vbs2_aq_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.F ln -sf ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.F ln -sf ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.F ln -sf ../../../module_kpp_saprc99_mosaic_8bin_vbs2_aq_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.F > module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.b > module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.f90 rm -f module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.f90 rm -f module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.F > module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.b > module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.f90 rm -f module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.f90 rm -f module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.F > module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.b > module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.f90 rm -f module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_saprc99_mosaic_8bin_vbs2_aq_Precision.o module_kpp_saprc99_mosaic_8bin_vbs2_aq_Parameters.o module_kpp_saprc99_mosaic_8bin_vbs2_aq_JacobianSP.o write_decomp.o echo saprc99_mosaic_8bin_vbs2_aq > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: saprc99_mosaic_8bin_vbs2_aq fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe saprc99_mosaic_8bin_vbs2_aq integr_edit: replacing CALL saprc99_mosaic_8bin_vbs2_aq_KppDecomp ( A, ising ) END MODULE saprc99_mosaic_8bin_vbs2_aq_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ========================================================= mechanisms/saprc99 ln -s ../../util/Makefile_kpp mechanisms/saprc99/Makefile ln -s ../chem/KPP/inc/saprc99/extra_args_to_update_rconst_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/extra_args_update_rconst_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/extra_decls_update_rconst_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_a_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_b_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_e_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_ia_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_ib_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_ibu_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_l_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/saprc99/kpp_mechd_u_saprc99.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc model saprc99 /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/bin/kpp saprc99.kpp This is KPP-2.1. KPP is parsing the equation file. KPP was told to generate WRF conform code KPP is computing Jacobian sparsity structure. KPP is starting the code generation. KPP is initializing the code generation. KPP is using the WRF conform integrator routine: /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/kpp/kpp-2.1/int/WRF_conform/rosenbrock KPP is generating the monitor data: - saprc99_Monitor KPP is generating the utility data: - saprc99_Util KPP is generating the global declarations: - saprc99_Main KPP is generating the ODE function: - saprc99_Function KPP is generating the ODE Jacobian: - saprc99_Jacobian - saprc99_JacobianSP KPP is generating the linear algebra routines: - saprc99_LinearAlgebra KPP is generating the utility functions: - saprc99_Util KPP is generating the rate laws: - saprc99_Rates KPP is generating UpdateRconstWRF (WRF conform): - saprc99_UpdateRconst KPP is generating the parameters: - saprc99_Parameters KPP is generating the global data: - saprc99_Global KPP is generating the driver from general.f90: - saprc99_Main KPP is starting the code post-processing. KPP has succesfully created the model "saprc99". cp -f saprc99_Integrator.f90 ../../../module_kpp_saprc99_Integr.F cp -f saprc99_Parameters.f90 ../../../module_kpp_saprc99_Parameters.F cp -f saprc99_Precision.f90 ../../../module_kpp_saprc99_Precision.F cp -f saprc99_JacobianSP.f90 ../../../module_kpp_saprc99_JacobianSP.F cp -f saprc99_Jacobian.f90 ../../../module_kpp_saprc99_Jacobian.F cp -f saprc99_Update_Rconst.f90 ../../../module_kpp_saprc99_Update_Rconst.F touch ../../util/run_wkc WARNING: If kpp fails here the path to WRF-Chem might be too long for yacc ... Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f decomp_uses.inc echo USE saprc99_Parameters > decomp_uses.inc echo USE saprc99_JacobianSP >> decomp_uses.inc ln -sf ../../../module_kpp_saprc99_Precision.F ln -sf ../../../module_kpp_saprc99_Parameters.F ln -sf ../../../module_kpp_saprc99_JacobianSP.F ln -sf ../../../module_kpp_saprc99_Integr.F make -i -r comp make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f module_kpp_saprc99_Precision.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_Precision.F > module_kpp_saprc99_Precision.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_Precision.b > module_kpp_saprc99_Precision.f90 rm -f module_kpp_saprc99_Precision.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_Precision.f90 rm -f module_kpp_saprc99_Parameters.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_Parameters.F > module_kpp_saprc99_Parameters.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_Parameters.b > module_kpp_saprc99_Parameters.f90 rm -f module_kpp_saprc99_Parameters.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_Parameters.f90 rm -f module_kpp_saprc99_JacobianSP.o sed -f ../../../../arch/standard.sed module_kpp_saprc99_JacobianSP.F > module_kpp_saprc99_JacobianSP.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_saprc99_JacobianSP.b > module_kpp_saprc99_JacobianSP.f90 rm -f module_kpp_saprc99_JacobianSP.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 module_kpp_saprc99_JacobianSP.f90 rm -f write_decomp.o sed -f ../../../../arch/standard.sed write_decomp.F > write_decomp.b /lib/cpp -P -nostdinc -I../../../../inc -DEM_CORE=1 -DNMM_CORE= -DNMM_MAX_DIM=2600 -DCOAMPS_CORE= -DDA_CORE= -DEXP_CORE= -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST= -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp write_decomp.b > write_decomp.f90 rm -f write_decomp.b gfortran -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 write_decomp.f90 gfortran -o write_decomp.exe module_kpp_saprc99_Precision.o module_kpp_saprc99_Parameters.o module_kpp_saprc99_JacobianSP.o write_decomp.o echo saprc99 > mech.tmp make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./write_decomp.exe -- in write_decomp for kpp mechanism: saprc99 fname: make -i -r integr_edit make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f integr_edit.o gcc -c -w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE= integr_edit.c gcc -o integr_edit.exe integr_edit.o make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' ./integr_edit.exe saprc99 integr_edit: replacing CALL saprc99_KppDecomp ( A, ising ) END MODULE saprc99_Integrator make -i -r clean make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' Makefile:50: warning: overriding recipe for target '.F.o' ../../../../configure.wrf:341: warning: ignoring old recipe for target '.F.o' Makefile:58: warning: overriding recipe for target '.c.o' ../../../../configure.wrf:372: warning: ignoring old recipe for target '.c.o' rm -f *.o *.tmp *.mod module_kpp_* *~ *.inc *.exe *.f90 make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem/KPP/util/write_decomp' tuv_kpp: Argument = LAST ========================================================= ln -s ../chem/KPP/inc/fixed_args_kpp_interf.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/fixed_decl_kpp_interf.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc ln -s ../chem/KPP/inc/kpp_ctrl_default.inc /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc RUN WRF-Chem KPP coupler --------------------------- opening Registry/registry.dimspec including Registry/registry.dimspec opening Registry/Registry.EM_COMMON including Registry/Registry.EM_COMMON opening Registry/registry.io_boilerplate including Registry/registry.io_boilerplate opening Registry/io_boilerplate_temporary.inc including Registry/io_boilerplate_temporary.inc opening Registry/registry.chem including Registry/registry.chem opening Registry/registry.fire including Registry/registry.fire opening Registry/registry.avgflx including Registry/registry.avgflx opening Registry/registry.stoch including Registry/registry.stoch opening Registry/registry.les including Registry/registry.les opening Registry/registry.cam including Registry/registry.cam opening Registry/registry.clm including Registry/registry.clm opening Registry/registry.lake including Registry/registry.lake opening Registry/registry.ssib including Registry/registry.ssib opening Registry/registry.sbm including Registry/registry.sbm opening Registry/registry.diags including Registry/registry.diags opening Registry/registry.afwa including Registry/registry.afwa opening Registry/registry.rasm_diag including Registry/registry.rasm_diag opening Registry/registry.elec including Registry/registry.elec opening Registry/registry.bdy_perturb including Registry/registry.bdy_perturb opening Registry/registry.new3d_gca including Registry/registry.new3d_gca opening Registry/registry.hyb_coord including Registry/registry.hyb_coord opening Registry/registry.new3d_wif including Registry/registry.new3d_wif spcfilename: chem/KPP/mechanisms/radm2/radm2.spc spcfilename: chem/KPP/mechanisms/cri_mosaic_4bin_aq/cri_mosaic_4bin_aq.spc spcfilename: chem/KPP/mechanisms/racm_soa_vbs/racm_soa_vbs.spc spcfilename: chem/KPP/mechanisms/cri_mosaic_8bin_aq/cri_mosaic_8bin_aq.spc spcfilename: chem/KPP/mechanisms/mozart_mosaic_4bin_aq/mozart_mosaic_4bin_aq.spc spcfilename: chem/KPP/mechanisms/saprc99_mosaic_4bin_vbs2/saprc99_mosaic_4bin_vbs2.spc spcfilename: chem/KPP/mechanisms/saprc99_mosaic_8bin_vbs2_aq/saprc99_mosaic_8bin_vbs2_aq.spc spcfilename: chem/KPP/mechanisms/racm_soa_vbs_aqchem/racm_soa_vbs_aqchem.spc spcfilename: chem/KPP/mechanisms/racmsorg/racmsorg.spc spcfilename: chem/KPP/mechanisms/cbmz_mosaic/cbmz_mosaic.spc spcfilename: chem/KPP/mechanisms/nmhc9/nmhc9.spc spcfilename: chem/KPP/mechanisms/racmsorg_aqchem/racmsorg_aqchem.spc spcfilename: chem/KPP/mechanisms/cb05_sorg_vbs_aq/cb05_sorg_vbs_aq.spc spcfilename: chem/KPP/mechanisms/racm_mim/racm_mim.spc spcfilename: chem/KPP/mechanisms/crimech/crimech.spc spcfilename: chem/KPP/mechanisms/racm/racm.spc spcfilename: chem/KPP/mechanisms/cbm4/cbm4.spc spcfilename: chem/KPP/mechanisms/racm_esrlsorg/racm_esrlsorg.spc spcfilename: chem/KPP/mechanisms/cb05_sorg_aq/cb05_sorg_aq.spc spcfilename: chem/KPP/mechanisms/racm_esrlsorg_aqchem/racm_esrlsorg_aqchem.spc spcfilename: chem/KPP/mechanisms/mozcart/mozcart.spc spcfilename: chem/KPP/mechanisms/saprc99/saprc99.spc spcfilename: chem/KPP/mechanisms/mozart/mozart.spc spcfilename: chem/KPP/mechanisms/racmpm/racmpm.spc spcfilename: chem/KPP/mechanisms/mozart_mosaic_4bin/mozart_mosaic_4bin.spc spcfilename: chem/KPP/mechanisms/cbmz_bb/cbmz_bb.spc spcfilename: chem/KPP/mechanisms/gocartracm/gocartracm.spc spcfilename: chem/KPP/mechanisms/radm2sorg/radm2sorg.spc FOUND match between WRF-Chem/KPP for mechanism: radm2 Found file chem/KPP/mechanisms/radm2/radm2_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cri_mosaic_4bin_aq Found file chem/KPP/mechanisms/cri_mosaic_4bin_aq/cri_mosaic_4bin_aq_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racm_soa_vbs Found file chem/KPP/mechanisms/racm_soa_vbs/racm_soa_vbs_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cri_mosaic_8bin_aq Found file chem/KPP/mechanisms/cri_mosaic_8bin_aq/cri_mosaic_8bin_aq_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: mozart_mosaic_4bin_aq Found file chem/KPP/mechanisms/mozart_mosaic_4bin_aq/mozart_mosaic_4bin_aq_wrfkpp.equiv next: get_wrf_chem_specs next: get_wrf_radicals next: get_wrf_jvals next: get_kpp_chem_specs chem/KPP/mechanisms/radm2 Found chem/KPP/mechanisms/radm2/radm2.spc chem/KPP/mechanisms/cri_mosaic_4bin_aq Found chem/KPP/mechanisms/cri_mosaic_4bin_aq/cri_mosaic_4bin_aq.spc chem/KPP/mechanisms/racm_soa_vbs Found chem/KPP/mechanisms/racm_soa_vbs/racm_soa_vbs.spc chem/KPP/mechanisms/cri_mosaic_8bin_aq Found chem/KPP/mechanisms/cri_mosaic_8bin_aq/cri_mosaic_8bin_aq.spc chem/KPP/mechanisms/mozart_mosaic_4bin_aq Found chem/KPP/mechanisms/mozart_mosaic_4bin_aq/mozart_mosaic_4bin_aq.spc chem/KPP/mechanisms/saprc99_mosaic_4bin_vbs2 Found chem/KPP/mechanisms/saprc99_mosaic_4bin_vbs2/saprc99_mosaic_4bin_vbs2.spc chem/KPP/mechanisms/saprc99_mosaic_8bin_vbs2_aq Found chem/KPP/mechanisms/saprc99_mosaic_8bin_vbs2_aq/saprc99_mosaic_8bin_vbs2_aq.spc chem/KPP/mechanisms/racm_soa_vbs_aqchem Found chem/KPP/mechanisms/racm_soa_vbs_aqchem/racm_soa_vbs_aqchem.spc chem/KPP/mechanisms/racmsorg Found chem/KPP/mechanisms/racmsorg/racmsorg.spc chem/KPP/mechanisms/cbmz_mosaic Found chem/KPP/mechanisms/cbmz_mosaic/cbmz_mosaic.spc chem/KPP/mechanisms/nmhc9 Found chem/KPP/mechanisms/nmhc9/nmhc9.spc chem/KPP/mechanisms/racmsorg_aqchem Found chem/KPP/mechanisms/racmsorg_aqchem/racmsorg_aqchem.spc chem/KPP/mechanisms/cb05_sorg_vbs_aq Found chem/KPP/mechanisms/cb05_sorg_vbs_aq/cb05_sorg_vbs_aq.spc chem/KPP/mechanisms/racm_mim Found chem/KPP/mechanisms/racm_mim/racm_mim.spc chem/KPP/mechanisms/crimech Found chem/KPP/mechanisms/crimech/crimech.spc chem/KPP/mechanisms/racm Found chem/KPP/mechanisms/racm/racm.spc chem/KPP/mechanisms/cbm4 Found chem/KPP/mechanisms/cbm4/cbm4.spc chem/KPP/mechanisms/racm_esrlsorg Found chem/KPP/mechanisms/racm_esrlsorg/racm_esrlsorg.spc chem/KPP/mechanisms/cb05_sorg_aq Found chem/KPP/mechanisms/cb05_sorg_aq/cb05_sorg_aq.spc chem/KPP/mechanisms/racm_esrlsorg_aqchem Found chem/KPP/mechanisms/racm_esrlsorg_aqchem/racm_esrlsorg_aqchem.spc chem/KPP/mechanisms/mozcart Found chem/KPP/mechanisms/mozcart/mozcart.spc chem/KPP/mechanisms/saprc99 Found chem/KPP/mechanisms/saprc99/saprc99.spc chem/KPP/mechanisms/mozart Found chem/KPP/mechanisms/mozart/mozart.spc chem/KPP/mechanisms/racmpm Found chem/KPP/mechanisms/racmpm/racmpm.spc chem/KPP/mechanisms/mozart_mosaic_4bin Found chem/KPP/mechanisms/mozart_mosaic_4bin/mozart_mosaic_4bin.spc chem/KPP/mechanisms/cbmz_bb Found chem/KPP/mechanisms/cbmz_bb/cbmz_bb.spc chem/KPP/mechanisms/gocartracm Found chem/KPP/mechanisms/gocartracm/gocartracm.spc chem/KPP/mechanisms/radm2sorg Found chem/KPP/mechanisms/radm2sorg/radm2sorg.spc next: compare_kpp_to_species ... testing radm2 radm2 kpp_name, wrf_name OH HO ... testing cri_mosaic_4bin_aq cri_mosaic_4bin_aq kpp_name, wrf_name OH HO kpp_name, wrf_name CH3COCH3 KET kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3CO3H PAA kpp_name, wrf_name IC3H7OOH PROOH kpp_name, wrf_name H2SO4 SULF ... testing racm_soa_vbs racm_soa_vbs kpp_name, wrf_name PHO RPHO ... testing cri_mosaic_8bin_aq cri_mosaic_8bin_aq kpp_name, wrf_name OH HO kpp_name, wrf_name CH3COCH3 KET kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3CO3H PAA kpp_name, wrf_name IC3H7OOH PROOH kpp_name, wrf_name H2SO4 SULF ... testing mozart_mosaic_4bin_aq mozart_mosaic_4bin_aq kpp_name, wrf_name OH HO kpp_name, wrf_name HO2NO2 HNO4 kpp_name, wrf_name CH2O HCHO kpp_name, wrf_name CH3COCH3 ACET kpp_name, wrf_name ROOH ACETP kpp_name, wrf_name HYAC ACETOL kpp_name, wrf_name RO2 ACETO2 kpp_name, wrf_name CH3COCHO MGLY kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3COOOH PAA kpp_name, wrf_name GLYOXAL GLY kpp_name, wrf_name POOH C3H6OOH kpp_name, wrf_name C2H5OOH ETOOH kpp_name, wrf_name C2H5O2 ETO2 kpp_name, wrf_name CH3CHO ALD kpp_name, wrf_name MACRO2 MVKO2 kpp_name, wrf_name MACROOH MVKOOH kpp_name, wrf_name C3H7OO FOUND match between WRF-Chem/KPP for mechanism: saprc99_mosaic_4bin_vbs2 Found file chem/KPP/mechanisms/saprc99_mosaic_4bin_vbs2/saprc99_mosaic_4bin_vbs2_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: saprc99_mosaic_8bin_vbs2_aq Found file chem/KPP/mechanisms/saprc99_mosaic_8bin_vbs2_aq/saprc99_mosaic_8bin_vbs2_aq_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racm_soa_vbs_aqchem Found file chem/KPP/mechanisms/racm_soa_vbs_aqchem/racm_soa_vbs_aqchem_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racmsorg Found file chem/KPP/mechanisms/racmsorg/racmsorg_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cbmz_mosaic Found file chem/KPP/mechanisms/cbmz_mosaic/cbmz_mosaic_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: nmhc9 Found file chem/KPP/mechanisms/nmhc9/nmhc9_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racmsorg_aqchem Found file chem/KPP/mechanisms/racmsorg_aqchem/racmsorg_aqchem_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cb05_sorg_vbs_aq Found file chem/KPP/mechanisms/cb05_sorg_vbs_aq/cb05_sorg_vbs_aq_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racm_mim Found file chem/KPP/mechanisms/racm_mim/racm_mim_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: crimech Found file chem/KPP/mechanisms/crimech/crimech_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racm Found file chem/KPP/mechanisms/racm/racm_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cbm4 Found file chem/KPP/mechanisms/cbm4/cbm4_wrfkpp.equiv ERROR: variable name for third body in KPP species file is expected to be M, but was not found in cbm4 species file FOUND match between WRF-Chem/KPP for mechanism: racm_esrlsorg Found file chem/KPP/mechanisms/racm_esrlsorg/racm_esrlsorg_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cb05_sorg_aq Found file chem/KPP/mechanisms/cb05_sorg_aq/cb05_sorg_aq_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: racm_esrlsorg_aqchem Found file chem/KPP/mechanisms/racm_esrlsorg_aqchem/racm_esrlsorg_aqchem_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: mozcart Found file chem/KPP/mechanisms/mozcart/mozcart_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: saprc99 Found file chem/KPP/mechanisms/saprc99/saprc99_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: mozart Found file chem/KPP/mechanisms/mozart/mozart_wrfkpp.equiv H PROOH kpp_name, wrf_name C3H7O2 PRO2 kpp_name, wrf_name ISOP ISOPR kpp_name, wrf_name ISOPO2 ISO2 kpp_name, wrf_name ISOPOOH ISOOH kpp_name, wrf_name ISOPNO3 ISOPN kpp_name, wrf_name BIGALD OPEN kpp_name, wrf_name CRESOL CRES kpp_name, wrf_name TOLUENE TOL kpp_name, wrf_name TOLO2 TO2 kpp_name, wrf_name SO4 SULF kpp_name, wrf_name PHENOL PHEN kpp_name, wrf_name XYLENES XYL kpp_name, wrf_name BZALD BALD ... testing saprc99_mosaic_4bin_vbs2 saprc99_mosaic_4bin_vbs2 kpp_name, wrf_name OH HO ... testing saprc99_mosaic_8bin_vbs2_aq saprc99_mosaic_8bin_vbs2_aq kpp_name, wrf_name OH HO ... testing racm_soa_vbs_aqchem racm_soa_vbs_aqchem kpp_name, wrf_name PHO RPHO ... testing racmsorg racmsorg kpp_name, wrf_name PHO RPHO ... testing cbmz_mosaic cbmz_mosaic kpp_name, wrf_name OH HO kpp_name, wrf_name H2SO4 SULF kpp_name, wrf_name C2H6 ETH kpp_name, wrf_name ALD2 ALD kpp_name, wrf_name AONE KET kpp_name, wrf_name C2H4 OL2 kpp_name, wrf_name OLET OLT kpp_name, wrf_name OLEI OLI kpp_name, wrf_name CRES CSL kpp_name, wrf_name ISOP ISO kpp_name, wrf_name CH3OOH OP1 kpp_name, wrf_name ETHOOH OP2 kpp_name, wrf_name HCOOH ORA1 kpp_name, wrf_name RCOOH ORA2 kpp_name, wrf_name ANOL C2H5OH kpp_name, wrf_name ROOH OP3 ... testing nmhc9 nmhc9 kpp_name, wrf_name MEOOH OP1 kpp_name, wrf_name ISOP ISOPR kpp_name, wrf_name OH HO ... testing racmsorg_aqchem racmsorg_aqchem kpp_name, wrf_name PHO RPHO ... testing cb05_sorg_vbs_aq cb05_sorg_vbs_aq ... testing racm_mim racm_mim kpp_name, wrf_name PHO RPHO ... testing crimech crimech kpp_name, wrf_name OH HO kpp_name, wrf_name CH3COCH3 KET kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3CO3H PAA kpp_name, wrf_name IC3H7OOH PROOH kpp_name, wrf_name H2SO4 SULF ... testing racm racm kpp_name, wrf_name PHO RPHO ... testing cbm4 cbm4 ... testing racm_esrlsorg racm_esrlsorg kpp_name, wrf_name PHO RPHO ... testing cb05_sorg_aq cb05_sorg_aq ... testing racm_esrlsorg_aqchem racm_esrlsorg_aqchem kpp_name, wrf_name PHO RPHO ... testing mozcart mozcart kpp_name, wrf_name OH HO kpp_name, wrf_name HO2NO2 HNO4 kpp_name, wrf_name CH2O HCHO kpp_name, wrf_name CH3COCH3 ACET kpp_name, wrf_name ROOH ACETP kpp_name, wrf_name HYAC ACETOL kpp_name, wrf_name RO2 ACETO2 kpp_name, wrf_name CH3COCHO MGLY kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3COOOH PAA kpp_name, wrf_name GLYOXAL GLY kpp_name, wrf_name POOH C3H6OOH kpp_name, wrf_name C2H5OOH ETOOH kpp_name, wrf_name C2H5O2 ETO2 kpp_name, wrf_name CH3CHO ALD kpp_name, wrf_name MACRO2 MVKO2 kpp_name, wrf_name MACROOH MVKOOH kpp_name, wrf_name C3H7OOH PROOH kpp_name, wrf_name C3H7O2 PRO2 kpp_name, wrf_name ISOP ISOPR kpp_name, wrf_name ISOPO2 ISO2 kpp_name, wrf_name ISOPOOH ISOOH kpp_name, wrf_name ISOPNO3 ISOPN kpp_name, wrf_name BIGALD OPEN kpp_name, wrf_name CRESOL CRES kpp_name, wrf_name TOLUENE TOL kpp_name, wrf_name TOLO2 TO2 kpp_name, wrf_name SO4 SULF ... testing saprc99 saprc99 kpp_name, wrf_name OH HO ... testing mozart mozart kpp_name, wrf_name OH HO kpp_name, wrf_name HO2NO2 HNO4 kpp_name, wrf_name CH2O HCHO kpp_name, wrf_name CH3COCH3 ACET kpp_name, wrf_name ROOH ACETP kpp_name, wrf_name HYAC ACETOL kpp_name, wrf_name RO2 ACETO2 kpp_name, wrf_name CH3COCHO MGLY kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3COOOH PAA kpp_name, wrf_name GLYOXAL GLY kpp_name, wrf_name POOH C3H6OOH kpp_name, wrf_name C2H5OOH ETOOH kpp_name, wrf_name C2H5O2 ETO2 kpp_name, wrf_name CH3CHO ALD kpp_name, wrf_name MACRO2 MVKO2 kpp_name, wrf_name MACROOH MVKOOH kpp_name, wrf_name FOUND match between WRF-Chem/KPP for mechanism: racmpm Found file chem/KPP/mechanisms/racmpm/racmpm_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: mozart_mosaic_4bin Found file chem/KPP/mechanisms/mozart_mosaic_4bin/mozart_mosaic_4bin_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: cbmz_bb Found file chem/KPP/mechanisms/cbmz_bb/cbmz_bb_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: gocartracm Found file chem/KPP/mechanisms/gocartracm/gocartracm_wrfkpp.equiv FOUND match between WRF-Chem/KPP for mechanism: radm2sorg Found file chem/KPP/mechanisms/radm2sorg/radm2sorg_wrfkpp.equiv MATCHING PACK: radm2_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cri_mosaic_4bin_aq_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racm_soa_vbs_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cri_mosaic_8bin_aq_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: mozart_mosaic_4bin_aq_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: saprc99_mosaic_4bin_vbs2_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: saprc99_mosaic_8bin_vbs2_aq_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racm_soa_vbs_aqchem_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racmsorg_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cbmz_mosaic_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: nmhc9_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racmsorg_aqchem_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cb05_sorg_vbs_aq_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racm_mim_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: crimech_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racm_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cbm4_kpp 1 found (special) H2O WATER VAPOR MATCHING PACK: racm_esrlsorg_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cb05_sorg_aq_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racm_esrlsorg_aqchem_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: mozcart_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: saprc99_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: mozart_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: racmpm_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: mozart_mosaic_4bin_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: cbmz_bb_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: gocartracm_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY MATCHING PACK: radm2sorg_kpp 1 found (special) H2O WATER VAPOR 1 found (special) M THIRD BODY C3H7OOH PROOH kpp_name, wrf_name C3H7O2 PRO2 kpp_name, wrf_name ISOP ISOPR kpp_name, wrf_name ISOPO2 ISO2 kpp_name, wrf_name ISOPOOH ISOOH kpp_name, wrf_name ISOPNO3 ISOPN kpp_name, wrf_name BIGALD OPEN kpp_name, wrf_name CRESOL CRES kpp_name, wrf_name TOLUENE TOL kpp_name, wrf_name TOLO2 TO2 kpp_name, wrf_name SO4 SULF ... testing racmpm racmpm kpp_name, wrf_name PHO RPHO ... testing mozart_mosaic_4bin mozart_mosaic_4bin kpp_name, wrf_name OH HO kpp_name, wrf_name HO2NO2 HNO4 kpp_name, wrf_name CH2O HCHO kpp_name, wrf_name CH3COCH3 ACET kpp_name, wrf_name ROOH ACETP kpp_name, wrf_name HYAC ACETOL kpp_name, wrf_name RO2 ACETO2 kpp_name, wrf_name CH3COCHO MGLY kpp_name, wrf_name CH3CO3 ACO3 kpp_name, wrf_name CH3COOOH PAA kpp_name, wrf_name GLYOXAL GLY kpp_name, wrf_name POOH C3H6OOH kpp_name, wrf_name C2H5OOH ETOOH kpp_name, wrf_name C2H5O2 ETO2 kpp_name, wrf_name CH3CHO ALD kpp_name, wrf_name MACRO2 MVKO2 kpp_name, wrf_name MACROOH MVKOOH kpp_name, wrf_name C3H7OOH PROOH kpp_name, wrf_name C3H7O2 PRO2 kpp_name, wrf_name ISOP ISOPR kpp_name, wrf_name ISOPO2 ISO2 kpp_name, wrf_name ISOPOOH ISOOH kpp_name, wrf_name ISOPNO3 ISOPN kpp_name, wrf_name BIGALD OPEN kpp_name, wrf_name CRESOL CRES kpp_name, wrf_name TOLUENE TOL kpp_name, wrf_name TOLO2 TO2 kpp_name, wrf_name SO4 SULF kpp_name, wrf_name PHENOL PHEN kpp_name, wrf_name XYLENES XYL kpp_name, wrf_name BZALD BALD ... testing cbmz_bb cbmz_bb kpp_name, wrf_name OH HO kpp_name, wrf_name H2SO4 SULF kpp_name, wrf_name C2H6 ETH kpp_name, wrf_name ALD2 ALD kpp_name, wrf_name AONE KET kpp_name, wrf_name C2H4 OL2 kpp_name, wrf_name OLET OLT kpp_name, wrf_name OLEI OLI kpp_name, wrf_name CRES CSL kpp_name, wrf_name ISOP ISO kpp_name, wrf_name CH3OOH OP1 kpp_name, wrf_name ETHOOH OP2 kpp_name, wrf_name HCOOH ORA1 kpp_name, wrf_name RCOOH ORA2 kpp_name, wrf_name ANOL C2H5OH kpp_name, wrf_name ROOH OP3 ... testing gocartracm gocartracm kpp_name, wrf_name PHO RPHO ... testing radm2sorg radm2sorg kpp_name, wrf_name OH HO next: screen_out next: check_all next: change_chem_Makefile next: gen_kpp_mechanism_driver (writing chem/kpp_mechanism_driver.F) next: gen_call_to_kpp_mechanism_driver (writing inc/call_to_kpp_mech_drive.inc) next: gen_kpp_args_to_Update_Rconst (writing inc/args_to_update_rconst.inc and inc/ foo_io_flags.h ;\ fi ; \ /bin/mv foo_io_flags.h ../../inc/wrf_io_flags.h ) make[3]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/ioapi_share' ( cd /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share ; \ make -j 2 CC="gcc" CFLAGS="-w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE=0" RM="rm -f" RANLIB="ranlib" CPP="/lib/cpp -P -nostdinc" \ FC="gfortran -I. -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " TRADFLAG="-traditional-cpp" AR="ar" ARFLAGS="ru" archive) make[3]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share' make[4]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share' ar ru ./libio_grib_share.a io_grib_share.o get_region_center.o gridnav.o open_file.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib ./libio_grib_share.a make[4]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share' make[3]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share' ( cd /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1 ; \ make -j 2 CC="gcc" CFLAGS="-w -O3 -c -DDM_PARALLEL -DMAX_HISTORY=25 -DNMM_CORE=0" RM="rm -f" RANLIB="ranlib" CPP="/lib/cpp -P -nostdinc" \ FC="gfortran -I. -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " TRADFLAG="-traditional-cpp" AR="ar" ARFLAGS="ru" archive) make[3]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1' Doing make archive on library subdirectory MEL_grib1 make[4]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/MEL_grib1' make[5]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/MEL_grib1' ar ru ../libio_grib1.a FTP_getfile.o apply_bitmap.o display_gribhdr.o gbyte.o grib_dec.o grib_enc.o grib_seek.o gribgetbds.o gribgetbms.o gribgetgds.o gribgetpds.o gribhdr2file.o gribputbds.o gribputgds.o gribputpds.o hdr_print.o init_dec_struct.o init_enc_struct.o init_gribhdr.o init_struct.o ld_dec_lookup.o ld_enc_input.o ld_enc_lookup.o ld_grib_origctrs.o make_default_grbfn.o make_grib_log.o map_lvl.o map_parm.o pack_spatial.o prt_inp_struct.o upd_child_errmsg.o prt_badmsg.o swap.o grib_uthin.o set_bytes.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib ../libio_grib1.a make[5]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/MEL_grib1' make[4]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/MEL_grib1' Doing make archive on library subdirectory grib1_util make[4]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/grib1_util' make[5]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/grib1_util' ar ru ../libio_grib1.a alloc_2d.o read_grib.o write_grib.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib ../libio_grib1.a make[5]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/grib1_util' make[4]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/grib1_util' Doing make archive on library subdirectory WGRIB make[4]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/WGRIB' make[4]: Nothing to be done for 'archive'. make[4]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/WGRIB' make[4]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1' ar ru ./libio_grib1.a grib1_routines.o gribmap.o io_grib1.o trim.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib ./libio_grib1.a make[4]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1' make[3]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1' ( cd /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int ; \ make -j 2 CC="mpicc -cc=gcc -DMPI2_SUPPORT -DFSEEKO64_OK " CFLAGS_LOCAL="-w -O3 -c " RM="rm -f" RANLIB="ranlib" CPP="/lib/cpp -P -nostdinc" \ FC="time mpif90 -f90=gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " FGREP="fgrep -iq" \ TRADFLAG="-traditional-cpp" AR="ar" ARFLAGS="ru" ARCHFLAGS="-DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0" all ) make[3]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int' ( cd /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5 ; \ make -j 2 FC="gfortran" FFLAGS=" -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " RANLIB="ranlib" AR="ar" \ ARFLAGS="ru" CPP="/lib/cpp -P -nostdinc" CPPFLAGS="-DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp " RM="rm -f" ) make[3]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5' ar ru libfftpack.a c1f2kb.o cfft1b.o cmf3kf.o cosqb1.o costmi.o dcosq1f.o dfftb1.o mradb2.o mrfti1.o r1fgkf.o rfft2i.o sinqmi.o z1f2kf.o zfft1f.o zmf4kb.o c1f2kf.o cfft1f.o cmf4kb.o cosqf1.o d1f2kb.o dcosq1i.o dfftf1.o mradb3.o msntb1.o r4_factor.o rfftb1.o sint1b.o z1f3kb.o zfft1i.o zmf4kf.o c1f3kb.o cfft1i.o cmf4kf.o cosqmb.o d1f2kf.o dcosqb1.o dffti1.o mradb4.o msntf1.o r4_mcfti1.o rfftf1.o sint1f.o z1f3kf.o zfft2b.o zmf5kb.o c1f3kf.o cfft2b.o cmf5kb.o cosqmf.o d1f3kb.o dcosqf1.o dsint1b.o mradb5.o r1f2kb.o r4_tables.o rffti1.o sint1i.o z1f4kb.o zfft2f.o zmf5kf.o c1f4kb.o cfft2f.o cmf5kf.o cosqmi.o d1f3kf.o dcost1b.o dsint1f.o mradbg.o r1f2kf.o r8_factor.o rfftmb.o sintb1.o z1f4kf.o zfft2i.o zmfgkb.o c1f4kf.o cfft2i.o cmfgkb.o cost1b.o d1f4kb.o dcost1f.o dsint1i.o mradf2.o r1f3kb.o r8_mcfti1.o rfftmf.o sintf1.o z1f5kb.o zfftmb.o zmfgkf.o c1f5kb.o cfftmb.o cmfgkf.o cost1f.o d1f4kf.o dcost1i.o dsintb1.o mradf3.o r1f3kf.o r8_tables.o rfftmi.o sintmb.o z1f5kf.o zfftmf.o zmfm1b.o c1f5kf.o cfftmf.o cmfm1b.o cost1i.o d1f5kb.o dcostb1.o dsintf1.o mradf4.o r1f4kb.o rfft1b.o sinq1b.o sintmf.o z1fgkb.o zfftmi.o zmfm1f.o c1fgkb.o cfftmi.o cmfm1f.o costb1.o d1f5kf.o dcostf1.o mcsqb1.o mradf5.o r1f4kf.o rfft1f.o sinq1f.o sintmi.o z1fgkf.o zmf2kb.o c1fgkf.o cmf2kb.o cosq1b.o costf1.o d1fgkb.o dfft1b.o mcsqf1.o mradfg.o r1f5kb.o rfft1i.o sinq1i.o xercon.o z1fm1b.o zmf2kf.o c1fm1b.o cmf2kf.o cosq1f.o costmb.o d1fgkf.o dfft1f.o mcstb1.o mrftb1.o r1f5kf.o rfft2b.o sinqmb.o xerfft.o z1fm1f.o zmf3kb.o c1fm1f.o cmf3kb.o cosq1i.o costmf.o dcosq1b.o dfft1i.o mcstf1.o mrftf1.o r1fgkb.o rfft2f.o sinqmf.o z1f2kb.o zfft1b.o zmf3kf.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libfftpack.a make[3]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5' ( if [ ! -e /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/gen_comms.c ] ; then \ /bin/cp /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/gen_comms_warning /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/gen_comms.c ; \ cat /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/gen_comms.c >> /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/gen_comms.c ; fi ) ( if [ ! -e module_dm.F ] ; then /bin/cp module_dm_warning module_dm.F ; \ cat /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/module_dm.F >> module_dm.F ; fi ) make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame' make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " toolsdir make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' -------------------------------------- ( cd tools ; make -i -r CC_TOOLS_CFLAGS="-DNMM_CORE=0" CC_TOOLS="gcc -DIWORDSIZE=4 -DMAX_HISTORY=25" ) make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools' make[2]: 'registry' is up to date. make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools' make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' /bin/rm -f main/libwrflib.a main/libwrflib.lib make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " framework make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' -------------------------------------- ( cd frame ; make -i -r -j 2 framework; \ cd ../external/io_netcdf ; \ make -i -r NETCDFPATH="/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf" \ FC="time mpif90 -f90=gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " RANLIB="ranlib" \ CPP="/lib/cpp -P -nostdinc" LDFLAGS=" -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " TRADFLAG="-traditional-cpp" ESMF_IO_LIB_EXT="-L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time" \ LIB_LOCAL="" \ ESMF_MOD_DEPENDENCE="/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR" diffwrf; \ cd ../io_netcdf ; \ make -i -r NETCDFPATH="/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf" \ FC="gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " RANLIB="ranlib" \ CPP="/lib/cpp -P -nostdinc" LDFLAGS=" -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " TRADFLAG="-traditional-cpp" ESMF_IO_LIB_EXT="-L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time" \ LIB_LOCAL="" \ ESMF_MOD_DEPENDENCE="/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR"; \ cd ../io_pio ; \ echo SKIPPING PIO BUILD make -i -r NETCDFPATH="" \ FC="gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " RANLIB="ranlib" \ CPP="/lib/cpp -P -nostdinc" LDFLAGS=" -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " TRADFLAG="-traditional-cpp" ESMF_IO_LIB_EXT="-L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time" \ LIB_LOCAL="" \ ESMF_MOD_DEPENDENCE="/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR"; \ cd ../io_int ; \ make -i -r SFC="gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " \ FC="gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 " \ RANLIB="ranlib" CPP="/lib/cpp -P -nostdinc -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM" DM_FC="mpif90 -f90=gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 "\ TRADFLAG="-traditional-cpp" ESMF_IO_LIB_EXT="-L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time" \ ESMF_MOD_DEPENDENCE="/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90/module_utility.o" AR="INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR" diffwrf ; \ cd ../../frame ) make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame' ar ru ../main/libwrflib.a module_driver_constants.o module_domain_type.o module_streams.o module_domain.o module_integrate.o module_timing.o module_configure.o module_tiles.o module_machine.o module_nesting.o module_wrf_error.o module_state_description.o module_sm.o module_io.o module_comm_dm.o module_comm_dm_0.o module_comm_dm_1.o module_comm_dm_2.o module_comm_dm_3.o module_comm_dm_4.o module_comm_nesting_dm.o module_dm.o module_quilt_outbuf_ops.o module_io_quilt.o module_intermediate_nmm.o module_cpl.o module_cpl_oasis3.o module_clear_halos.o wrf_num_bytes_between.o wrf_shutdown.o wrf_debug.o libmassv.o collect_on_comm.o hires_timer.o clog.o nl_get_0_routines.o nl_get_1_routines.o nl_get_2_routines.o nl_get_3_routines.o nl_get_4_routines.o nl_get_5_routines.o nl_get_6_routines.o nl_get_7_routines.o nl_set_0_routines.o nl_set_1_routines.o nl_set_2_routines.o nl_set_3_routines.o nl_set_4_routines.o nl_set_5_routines.o nl_set_6_routines.o nl_set_7_routines.o module_alloc_space_0.o module_alloc_space_1.o module_alloc_space_2.o module_alloc_space_3.o module_alloc_space_4.o module_alloc_space_5.o module_alloc_space_6.o module_alloc_space_7.o module_alloc_space_8.o module_alloc_space_9.o ar: `u' modifier ignored since `D' is the default (see `U') ar: creating ../main/libwrflib.a ranlib ../main/libwrflib.a make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame' make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf' make[2]: 'diffwrf' is up to date. make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf' make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf' SKIPPING PIO BUILD make -i -r NETCDFPATH= FC=gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 RANLIB=ranlib CPP=/lib/cpp -P -nostdinc LDFLAGS= -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 TRADFLAG=-traditional-cpp ESMF_IO_LIB_EXT=-L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time LIB_LOCAL= ESMF_MOD_DEPENDENCE=/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90/module_utility.o AR=INTERNAL_BUILD_ERROR_SHOULD_NOT_NEED_AR make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int' make[2]: 'diffwrf' is up to date. make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int' make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " shared make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' -------------------------------------- if [ "`echo -j 2 | sed -e 's/-j//g' -e 's/ \+//g'`" -gt "6" ] ; then \ ( cd share ; make -i -r -j 6 ) ; \ else \ ( cd share ; make -i -r -j 2 ) ; \ fi make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share' if [ 0 -eq 1 ] ; then \ make -i -r nmm_contrib ; \ ar ru ../main/libwrflib.a module_model_constants.o module_bc_time_utilities.o module_get_file_names.o module_compute_geop.o module_check_a_mundo.o module_random.o module_llxy.o module_interp_nmm.o module_interp_store.o module_MPP.o module_date_time.o module_bc.o module_io_wrf.o module_soil_pre.o module_io_domain.o module_optional_input.o solve_interface.o mediation_interp_domain.o mediation_force_domain.o mediation_feedback_domain.o start_domain.o init_modules.o set_timekeeping.o interp_fcn.o sint.o wrf_ext_write_field.o wrf_ext_read_field.o wrf_tsin.o landread.o track_driver.o track_input.o module_trajectory.o bobrand.o wrf_timeseries.o track_driver.o wrf_fddaobs_in.o mediation_nest_move.o setfeenv.o input_wrf.o output_wrf.o wrf_bdyout.o wrf_bdyin.o dfi.o mediation_integrate.o mediation_wrfmain.o ; \ else \ ar ru ../main/libwrflib.a module_model_constants.o module_bc_time_utilities.o module_get_file_names.o module_compute_geop.o module_check_a_mundo.o module_random.o module_llxy.o module_interp_nmm.o module_interp_store.o module_MPP.o module_date_time.o module_bc.o module_io_wrf.o module_soil_pre.o module_io_domain.o module_optional_input.o solve_interface.o mediation_interp_domain.o mediation_force_domain.o mediation_feedback_domain.o start_domain.o init_modules.o set_timekeeping.o interp_fcn.o sint.o wrf_ext_write_field.o wrf_ext_read_field.o wrf_tsin.o landread.o track_driver.o track_input.o module_trajectory.o bobrand.o wrf_timeseries.o track_driver.o wrf_fddaobs_in.o mediation_nest_move.o setfeenv.o input_wrf.o output_wrf.o wrf_bdyout.o wrf_bdyin.o dfi.o mediation_integrate.o mediation_wrfmain.o ; \ fi ar: `u' modifier ignored since `D' is the default (see `U') make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share' make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " physics make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' -------------------------------------- if [ 1 -eq 0 ] ; then \ ( cd phys ; make -i -r CF2=" " ) ; \ else \ ( cd phys ; make -i -r CF2="../chem/module_data_mosaic_asect.o" ) ; \ fi make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys' if [ 0 -eq 1 ] ; then \ make -i -r -j 2 nmm_contrib ; \ ar ru ../main/libwrflib.a module_cam_shr_kind_mod.o module_cam_support.o module_cam_shr_const_mod.o module_cam_physconst.o module_cam_cldwat.o module_cam_wv_saturation.o module_cam_esinti.o module_cam_gffgch.o module_cam_error_function.o module_cam_constituents.o module_cam_trb_mtn_stress.o module_cam_molec_diff.o module_cam_upper_bc.o module_cam_bl_diffusion_solver.o module_cam_bl_eddy_diff.o module_cam_mp_microp_aero.o module_cam_mp_cldwat2m_micro.o module_cam_mp_ndrop.o module_cam_mp_modal_aero_initialize_data_phys.o module_cam_mp_radconstants.o module_cam_mp_conv_water.o module_cam_mp_qneg3.o module_data_cam_mam_aero.o module_data_cam_mam_asect.o module_cam_infnan.o module_bl_ysu.o module_bl_shinhong.o module_bl_mrf.o module_bl_gfs.o module_bl_gfsedmf.o module_bl_myjpbl.o module_bl_qnsepbl.o module_bl_acm.o module_bl_mynn.o module_bl_fogdes.o module_bl_gwdo.o module_bl_myjurb.o module_bl_boulac.o module_bl_camuwpbl_driver.o module_bl_mfshconvpbl.o module_shcu_camuwshcu_driver.o module_shcu_camuwshcu.o module_shcu_grims.o module_cu_camzm_driver.o module_cu_camzm.o module_bl_temf.o module_bl_gbmpbl.o module_cu_g3.o module_cu_kf.o module_cu_bmj.o module_cu_kfeta.o module_cu_mskf.o module_cu_tiedtke.o module_cu_ntiedtke.o module_cu_gd.o module_cu_gf_wrfdrv.o module_cu_gf_deep.o module_cu_gf_sh.o module_cu_nsas.o module_cu_sas.o module_cu_scalesas.o module_cu_osas.o module_cu_kfcup.o module_mp_radar.o module_mp_kessler.o module_mp_lin.o module_mp_sbu_ylin.o module_mp_wsm3.o module_mp_wsm5.o module_mp_wsm6.o module_mp_etanew.o module_mp_fer_hires.o module_mp_HWRF.o module_mp_thompson.o module_mp_full_sbm.o module_mp_fast_sbm.o module_ltng_lpi.o module_mp_gsfcgce.o module_mp_morr_two_moment.o module_mp_p3.o module_mp_milbrandt2mom.o module_mp_nssl_2mom.o module_mp_wdm5.o module_mp_wdm6.o module_mp_cammgmp_driver.o module_ra_sw.o module_ra_clWRF_support.o module_ra_gsfcsw.o module_ra_goddard.o module_ra_rrtm.o module_ra_rrtmg_lw.o module_ra_rrtmg_sw.o module_ra_rrtmg_lwf.o module_ra_rrtmg_swf.o module_ra_cam_support.o module_ra_cam.o module_ra_gfdleta.o module_ra_flg.o module_ra_HWRF.o module_ra_hs.o module_ra_aerosol.o module_sf_sfclay.o module_sf_sfclayrev.o module_sf_gfs.o module_sf_exchcoef.o module_sf_gfdl.o module_sf_slab.o module_sf_noahdrv.o module_sf_noahlsm.o module_sf_clm.o module_sf_ssib.o module_sf_noah_seaice.o module_sf_noah_seaice_drv.o module_sf_noahlsm_glacial_only.o module_sf_noahmp_groundwater.o module_sf_noahmpdrv.o module_sf_noahmplsm.o module_sf_noahmp_glacier.o module_sf_urban.o module_sf_bep.o module_sf_bep_bem.o module_sf_bem.o module_sf_pxlsm.o module_sf_pxlsm_data.o module_sf_ruclsm.o module_sf_sfcdiags.o module_sf_sfcdiags_ruclsm.o module_sf_sstskin.o module_sf_tmnupdate.o module_sf_ocean_driver.o module_sf_oml.o module_sf_3dpwp.o module_sf_myjsfc.o module_sf_qnsesfc.o module_sf_mynn.o module_sf_fogdes.o module_sf_pxsfclay.o module_sf_temfsfclay.o module_sf_idealscmsfclay.o module_sf_scmflux.o module_sf_scmskintemp.o module_physics_addtendc.o module_physics_init.o module_gfs_machine.o module_gfs_funcphys.o module_gfs_physcons.o module_progtm.o module_pbl_driver.o module_data_gocart_dust.o module_cumulus_driver.o module_shallowcu_driver.o module_microphysics_driver.o module_microphysics_zero_out.o module_mixactivate.o module_radiation_driver.o module_surface_driver.o module_lightning_driver.o module_ltng_cpmpr92z.o module_ltng_crmpr92.o module_ltng_iccg.o module_fdda_psufddagd.o module_fdda_spnudging.o module_fddagd_driver.o module_fddaobs_rtfdda.o module_fddaobs_driver.o module_wind_fitch.o module_sf_lake.o module_diagnostics_driver.o \ \ module_diag_refl.o ; \ else \ make -i -r -j 2 non_nmm ; \ ar ru ../main/libwrflib.a module_cam_shr_kind_mod.o module_cam_support.o module_cam_shr_const_mod.o module_cam_physconst.o module_cam_cldwat.o module_cam_wv_saturation.o module_cam_esinti.o module_cam_gffgch.o module_cam_error_function.o module_cam_constituents.o module_cam_trb_mtn_stress.o module_cam_molec_diff.o module_cam_upper_bc.o module_cam_bl_diffusion_solver.o module_cam_bl_eddy_diff.o module_cam_mp_microp_aero.o module_cam_mp_cldwat2m_micro.o module_cam_mp_ndrop.o module_cam_mp_modal_aero_initialize_data_phys.o module_cam_mp_radconstants.o module_cam_mp_conv_water.o module_cam_mp_qneg3.o module_data_cam_mam_aero.o module_data_cam_mam_asect.o module_cam_infnan.o module_bl_ysu.o module_bl_shinhong.o module_bl_mrf.o module_bl_gfs.o module_bl_gfsedmf.o module_bl_myjpbl.o module_bl_qnsepbl.o module_bl_acm.o module_bl_mynn.o module_bl_fogdes.o module_bl_gwdo.o module_bl_myjurb.o module_bl_boulac.o module_bl_camuwpbl_driver.o module_bl_mfshconvpbl.o module_shcu_camuwshcu_driver.o module_shcu_camuwshcu.o module_shcu_grims.o module_cu_camzm_driver.o module_cu_camzm.o module_bl_temf.o module_bl_gbmpbl.o module_cu_g3.o module_cu_kf.o module_cu_bmj.o module_cu_kfeta.o module_cu_mskf.o module_cu_tiedtke.o module_cu_ntiedtke.o module_cu_gd.o module_cu_gf_wrfdrv.o module_cu_gf_deep.o module_cu_gf_sh.o module_cu_nsas.o module_cu_sas.o module_cu_scalesas.o module_cu_osas.o module_cu_kfcup.o module_mp_radar.o module_mp_kessler.o module_mp_lin.o module_mp_sbu_ylin.o module_mp_wsm3.o module_mp_wsm5.o module_mp_wsm6.o module_mp_etanew.o module_mp_fer_hires.o module_mp_HWRF.o module_mp_thompson.o module_mp_full_sbm.o module_mp_fast_sbm.o module_ltng_lpi.o module_mp_gsfcgce.o module_mp_morr_two_moment.o module_mp_p3.o module_mp_milbrandt2mom.o module_mp_nssl_2mom.o module_mp_wdm5.o module_mp_wdm6.o module_mp_cammgmp_driver.o module_ra_sw.o module_ra_clWRF_support.o module_ra_gsfcsw.o module_ra_goddard.o module_ra_rrtm.o module_ra_rrtmg_lw.o module_ra_rrtmg_sw.o module_ra_rrtmg_lwf.o module_ra_rrtmg_swf.o module_ra_cam_support.o module_ra_cam.o module_ra_gfdleta.o module_ra_flg.o module_ra_HWRF.o module_ra_hs.o module_ra_aerosol.o module_sf_sfclay.o module_sf_sfclayrev.o module_sf_gfs.o module_sf_exchcoef.o module_sf_gfdl.o module_sf_slab.o module_sf_noahdrv.o module_sf_noahlsm.o module_sf_clm.o module_sf_ssib.o module_sf_noah_seaice.o module_sf_noah_seaice_drv.o module_sf_noahlsm_glacial_only.o module_sf_noahmp_groundwater.o module_sf_noahmpdrv.o module_sf_noahmplsm.o module_sf_noahmp_glacier.o module_sf_urban.o module_sf_bep.o module_sf_bep_bem.o module_sf_bem.o module_sf_pxlsm.o module_sf_pxlsm_data.o module_sf_ruclsm.o module_sf_sfcdiags.o module_sf_sfcdiags_ruclsm.o module_sf_sstskin.o module_sf_tmnupdate.o module_sf_ocean_driver.o module_sf_oml.o module_sf_3dpwp.o module_sf_myjsfc.o module_sf_qnsesfc.o module_sf_mynn.o module_sf_fogdes.o module_sf_pxsfclay.o module_sf_temfsfclay.o module_sf_idealscmsfclay.o module_sf_scmflux.o module_sf_scmskintemp.o module_physics_addtendc.o module_physics_init.o module_gfs_machine.o module_gfs_funcphys.o module_gfs_physcons.o module_progtm.o module_pbl_driver.o module_data_gocart_dust.o module_cumulus_driver.o module_shallowcu_driver.o module_microphysics_driver.o module_microphysics_zero_out.o module_mixactivate.o module_radiation_driver.o module_surface_driver.o module_lightning_driver.o module_ltng_cpmpr92z.o module_ltng_crmpr92.o module_ltng_iccg.o module_fdda_psufddagd.o module_fdda_spnudging.o module_fddagd_driver.o module_fddaobs_rtfdda.o module_fddaobs_driver.o module_wind_fitch.o module_sf_lake.o module_diagnostics_driver.o \ module_fr_fire_driver.o module_fr_fire_driver_wrf.o module_fr_fire_atm.o module_fr_fire_model.o module_fr_fire_core.o module_fr_fire_phys.o module_fr_fire_util.o \ module_diag_afwa.o module_diag_cl.o module_diag_hailcast.o module_diag_misc.o module_diag_rasm.o module_diag_pld.o module_diag_zld.o ; \ fi make[3]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys' rm -f module_diag_afwa.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_diag_afwa.F > module_diag_afwa.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_diag_afwa.G > module_diag_afwa.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_diag_afwa.H > module_diag_afwa.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_diag_afwa.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_diag_afwa.f90 rm -f module_diag_afwa.G module_diag_afwa.H module_diag_afwa.bb time mpif90 -f90=gfortran -o module_diag_afwa.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_diag_afwa.f90 3.66user 0.03system 0:04.07elapsed 90%CPU (0avgtext+0avgdata 112600maxresident)k 2464inputs+1360outputs (8major+30771minor)pagefaults 0swaps rm -f module_diagnostics_driver.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_diagnostics_driver.F > module_diagnostics_driver.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_diagnostics_driver.G > module_diagnostics_driver.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_diagnostics_driver.H > module_diagnostics_driver.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_diagnostics_driver.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_diagnostics_driver.f90 rm -f module_diagnostics_driver.G module_diagnostics_driver.H module_diagnostics_driver.bb time mpif90 -f90=gfortran -o module_diagnostics_driver.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_diagnostics_driver.f90 3.14user 0.04system 0:03.23elapsed 98%CPU (0avgtext+0avgdata 123820maxresident)k 448inputs+1024outputs (4major+34393minor)pagefaults 0swaps make[3]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys' ar: `u' modifier ignored since `D' is the default (see `U') make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys' make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' if [ 1 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " chemics ; fi make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' -------------------------------------- if [ 1 -eq 1 ] ; then ( cd chem ; make -i -r ) ; fi make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem' rm -f module_kpp_radm2_Precision.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_Precision.F > module_kpp_radm2_Precision.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Precision.G > module_kpp_radm2_Precision.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_Precision.H > module_kpp_radm2_Precision.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_Precision.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_Precision.f90 rm -f module_kpp_radm2_Precision.G module_kpp_radm2_Precision.H module_kpp_radm2_Precision.bb time mpif90 -f90=gfortran -o module_kpp_radm2_Precision.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_Precision.f90 0.00user 0.00system 0:00.27elapsed 5%CPU (0avgtext+0avgdata 15080maxresident)k 0inputs+24outputs (0major+7022minor)pagefaults 0swaps rm -f module_kpp_radm2_Parameters.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_Parameters.F > module_kpp_radm2_Parameters.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Parameters.G > module_kpp_radm2_Parameters.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_Parameters.H > module_kpp_radm2_Parameters.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_Parameters.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_Parameters.f90 rm -f module_kpp_radm2_Parameters.G module_kpp_radm2_Parameters.H module_kpp_radm2_Parameters.bb time mpif90 -f90=gfortran -o module_kpp_radm2_Parameters.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_Parameters.f90 0.01user 0.00system 0:00.04elapsed 37%CPU (0avgtext+0avgdata 15196maxresident)k 0inputs+24outputs (0major+7113minor)pagefaults 0swaps rm -f module_kpp_radm2_JacobianSP.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_JacobianSP.F > module_kpp_radm2_JacobianSP.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_JacobianSP.G > module_kpp_radm2_JacobianSP.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_JacobianSP.H > module_kpp_radm2_JacobianSP.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_JacobianSP.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_JacobianSP.f90 rm -f module_kpp_radm2_JacobianSP.G module_kpp_radm2_JacobianSP.H module_kpp_radm2_JacobianSP.bb time mpif90 -f90=gfortran -o module_kpp_radm2_JacobianSP.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_JacobianSP.f90 0.03user 0.00system 0:00.05elapsed 65%CPU (0avgtext+0avgdata 16336maxresident)k 0inputs+112outputs (0major+7531minor)pagefaults 0swaps rm -f module_kpp_radm2_Jacobian.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_Jacobian.F > module_kpp_radm2_Jacobian.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Jacobian.G > module_kpp_radm2_Jacobian.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_Jacobian.H > module_kpp_radm2_Jacobian.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_Jacobian.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_Jacobian.f90 rm -f module_kpp_radm2_Jacobian.G module_kpp_radm2_Jacobian.H module_kpp_radm2_Jacobian.bb time mpif90 -f90=gfortran -o module_kpp_radm2_Jacobian.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_Jacobian.f90 0.33user 0.00system 0:00.36elapsed 93%CPU (0avgtext+0avgdata 39196maxresident)k 0inputs+248outputs (0major+11761minor)pagefaults 0swaps rm -f module_kpp_radm2_Update_Rconst.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_Update_Rconst.F > module_kpp_radm2_Update_Rconst.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Update_Rconst.G > module_kpp_radm2_Update_Rconst.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_Update_Rconst.H > module_kpp_radm2_Update_Rconst.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_Update_Rconst.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_Update_Rconst.f90 rm -f module_kpp_radm2_Update_Rconst.G module_kpp_radm2_Update_Rconst.H module_kpp_radm2_Update_Rconst.bb time mpif90 -f90=gfortran -o module_kpp_radm2_Update_Rconst.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_Update_Rconst.f90 0.11user 0.01system 0:00.14elapsed 87%CPU (0avgtext+0avgdata 27892maxresident)k 0inputs+128outputs (0major+8735minor)pagefaults 0swaps rm -f module_wkppc_constants.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_wkppc_constants.F > module_wkppc_constants.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_wkppc_constants.G > module_wkppc_constants.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_wkppc_constants.H > module_wkppc_constants.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_wkppc_constants.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_wkppc_constants.f90 rm -f module_wkppc_constants.G module_wkppc_constants.H module_wkppc_constants.bb time mpif90 -f90=gfortran -o module_wkppc_constants.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_wkppc_constants.f90 0.01user 0.00system 0:00.04elapsed 42%CPU (0avgtext+0avgdata 14968maxresident)k 0inputs+24outputs (0major+7068minor)pagefaults 0swaps rm -f module_kpp_radm2_Integr.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_Integr.F > module_kpp_radm2_Integr.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_Integr.G > module_kpp_radm2_Integr.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_Integr.H > module_kpp_radm2_Integr.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_Integr.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_Integr.f90 rm -f module_kpp_radm2_Integr.G module_kpp_radm2_Integr.H module_kpp_radm2_Integr.bb time mpif90 -f90=gfortran -o module_kpp_radm2_Integr.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_Integr.f90 2.82user 0.04system 0:02.90elapsed 98%CPU (0avgtext+0avgdata 113932maxresident)k 152inputs+1320outputs (2major+30192minor)pagefaults 0swaps rm -f module_kpp_radm2_interface.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_kpp_radm2_interface.F > module_kpp_radm2_interface.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_kpp_radm2_interface.G > module_kpp_radm2_interface.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_kpp_radm2_interface.H > module_kpp_radm2_interface.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_kpp_radm2_interface.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_kpp_radm2_interface.f90 rm -f module_kpp_radm2_interface.G module_kpp_radm2_interface.H module_kpp_radm2_interface.bb time mpif90 -f90=gfortran -o module_kpp_radm2_interface.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_kpp_radm2_interface.f90 4.34user 0.01system 0:04.39elapsed 99%CPU (0avgtext+0avgdata 45700maxresident)k 0inputs+568outputs (0major+13853minor)pagefaults 0swaps make[2]: *** No rule to make target 'module_kpp_cri_mosaic_4bin_aq_Precision.o', needed by 'module_kpp_cri_mosaic_4bin_aq_Parameters.o'. Stop. make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem' Makefile:909: recipe for target 'chemics' failed make[1]: [chemics] Error 2 (ignored) if [ 1 -eq 0 ] ; then \ if [ "`echo -j 2 | sed -e 's/-j//g' -e 's/ \+//g'`" -gt "16" ] ; then \ ( cd chem ; make -i -r -j 16 ) ; \ else \ ( cd chem ; make -i -r -j 2 ) ; \ fi \ fi make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' if [ 1 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " em_core ; fi make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' -------------------------------------- if [ 1 -eq 0 ] ; then \ CF= ; \ else \ CF="../chem/module_aerosols_sorgam.o ../chem/module_gocart_aerosols.o ../chem/module_mosaic_driver.o ../chem/module_input_tracer.o ../chem/module_aerosols_soa_vbs.o" ; \ fi ( cd dyn_em ; make -i -r -j 2 CF="" ) make[2]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/dyn_em' rm -f module_after_all_rk_steps.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" module_after_all_rk_steps.F > module_after_all_rk_steps.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp module_after_all_rk_steps.G > module_after_all_rk_steps.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" module_after_all_rk_steps.H > module_after_all_rk_steps.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe module_after_all_rk_steps.bb | /lib/cpp -P -nostdinc -traditional-cpp > module_after_all_rk_steps.f90 rm -f module_after_all_rk_steps.G module_after_all_rk_steps.H module_after_all_rk_steps.bb time mpif90 -f90=gfortran -o module_after_all_rk_steps.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include module_after_all_rk_steps.f90 1.59user 0.06system 0:01.71elapsed 96%CPU (0avgtext+0avgdata 238168maxresident)k 13904inputs+184outputs (0major+39456minor)pagefaults 0swaps rm -f solve_em.o sed -e "s/grid%mu/gridmu/g" -e "s/grid%Mu/gridMu/g" -e "s/^\!.*'.*//" -e "s/^ *\!.*'.*//" solve_em.F > solve_em.G /lib/cpp -P -nostdinc -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -DEM_CORE=1 -DNMM_CORE=0 -DNMM_MAX_DIM=2600 -DCOAMPS_CORE=0 -DDA_CORE=0 -DEXP_CORE=0 -DIWORDSIZE=4 -DDWORDSIZE=8 -DRWORDSIZE=4 -DLWORDSIZE=4 -DNONSTANDARD_SYSTEM_SUBR -DWRF_USE_CLM -DDM_PARALLEL -DNETCDF -DUSE_ALLOCATABLES -DGRIB1 -DINTIO -DKEEP_INT_AROUND -DLIMIT_ARGS -DCONFIG_BUF_LEN=65536 -DMAX_DOMAINS_F=21 -DMAX_HISTORY=25 -DNMM_NEST=0 -DWRF_CHEM -DBUILD_CHEM=1 -DWRF_KPP -I. -traditional-cpp solve_em.G > solve_em.H sed -e "s/gridmu/grid%mu/g" -e "s/gridMu/grid%Mu/g" solve_em.H > solve_em.bb /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/tools/standard.exe solve_em.bb | /lib/cpp -P -nostdinc -traditional-cpp > solve_em.f90 rm -f solve_em.G solve_em.H solve_em.bb time mpif90 -f90=gfortran -o solve_em.o -c -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 -I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include solve_em.f90 30.02user 0.06system 0:30.27elapsed 99%CPU (0avgtext+0avgdata 249424maxresident)k 4352inputs+2776outputs (0major+63359minor)pagefaults 0swaps ar ru ../main/libwrflib.a module_advect_em.o module_diffusion_em.o module_small_step_em.o module_big_step_utilities_em.o module_em.o module_solvedebug_em.o module_bc_em.o module_init_utilities.o module_wps_io_arw.o module_damping_em.o module_polarfft.o module_force_scm.o module_first_rk_step_part1.o module_first_rk_step_part2.o module_avgflx_em.o module_sfs_nba.o module_convtrans_prep.o module_sfs_driver.o module_stoch.o module_after_all_rk_steps.o init_modules_em.o solve_em.o start_em.o shift_domain_em.o couple_or_uncouple_em.o nest_init_utils.o adapt_timestep_em.o interp_domain_em.o ar: `u' modifier ignored since `D' is the default (see `U') make[2]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/dyn_em' make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3' if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " nmm_core ; fi if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " exp_core ; fi if [ 0 -eq 1 ] ; then make -i -r MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " wrf_hydro ; fi ( cd main ; make -i -r RLFLAGS="" MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " SOLVER=em em_wrf ) make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main' ranlib libwrflib.a time mpif90 -f90=gfortran -o wrf.exe -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 wrf.o ../main/module_wrf_top.o libwrflib.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5/libfftpack.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/libio_grib1.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share/libio_grib_share.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int/libwrfio_int.a -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/librsl_lite.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/module_internal_header_util.o /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/pack_utils.o -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -lwrfio_nf -L/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/lib -lnetcdff -lnetcdf libwrflib.a(solve_em.o): In function `solve_em_': solve_em.f90:(.text+0x1bfdb): undefined reference to `__module_input_tracer_MOD_flow_dep_bdy_tracer' solve_em.f90:(.text+0x1d7ec): undefined reference to `__module_input_chem_data_MOD_flow_dep_bdy_chem' libwrflib.a(start_em.o): In function `start_domain_em_': start_em.f90:(.text+0xc299): undefined reference to `__module_input_tracer_MOD_initialize_tracer' start_em.f90:(.text+0xe195): undefined reference to `chem_init_' start_em.f90:(.text+0xf3de): undefined reference to `__module_aerosols_soa_vbs_MOD_sum_pm_soa_vbs' start_em.f90:(.text+0x10d57): undefined reference to `__module_gocart_aerosols_MOD_sum_pm_gocart' start_em.f90:(.text+0x154b9): undefined reference to `__module_mosaic_driver_MOD_sum_pm_mosaic' start_em.f90:(.text+0x26980): undefined reference to `__module_aerosols_sorgam_MOD_sum_pm_sorgam' libwrflib.a(module_cu_kfcup.o): In function `__module_cu_kfcup_MOD_kf_cup_cps': module_cu_kfcup.f90:(.text+0x2f860): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x2f865): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x2f86a): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x2f86f): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x2f874): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x2f879): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x2f87e): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x2f883): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x2f888): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x2f88d): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x2f892): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x2f897): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x33423): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x33428): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x3342d): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x33432): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x33437): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x3343c): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x33441): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x33446): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x3344b): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x33450): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x33455): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x3345a): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x35b41): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x35b46): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x35b4b): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x35b50): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x35b55): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x35b5a): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x35b5f): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x35b64): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x35b69): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x35b6e): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x35b73): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x35b78): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' libwrflib.a(solve_interface.o): In function `solve_interface_': solve_interface.f90:(.text+0x2ea0): undefined reference to `chem_driver_' collect2: error: ld returned 1 exit status Command exited with non-zero status 1 0.34user 0.09system 0:00.95elapsed 46%CPU (0avgtext+0avgdata 72280maxresident)k 15904inputs+108760outputs (0major+17400minor)pagefaults 0swaps Makefile:16: recipe for target 'em_wrf' failed make[1]: [em_wrf] Error 1 (ignored) make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main' ( cd run ; /bin/rm -f wrf.exe ; ln -s ../main/wrf.exe . ) if [ 0 -eq 1 ] ; then \ ( cd main ; make -i -r RLFLAGS="" MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " SOLVER=em em_wrf_SST_ESMF ) ; \ fi build started: Thu Dec 7 12:18:15 IST 2017 build completed: Thu Dec 7 12:19:27 IST 2017 -------------------------------------- ( cd main ; make -i -r RLFLAGS="" MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " SOLVER=em IDEAL_CASE=real em_real ) make[1]: Entering directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main' ranlib libwrflib.a time mpif90 -f90=gfortran -o ndown.exe -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 ndown_em.o ../dyn_em/module_initialize_real.o libwrflib.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5/libfftpack.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/libio_grib1.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share/libio_grib_share.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int/libwrfio_int.a -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/librsl_lite.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/module_internal_header_util.o /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/pack_utils.o -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -lwrfio_nf -L/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/lib -lnetcdff -lnetcdf libwrflib.a(start_em.o): In function `start_domain_em_': start_em.f90:(.text+0xc299): undefined reference to `__module_input_tracer_MOD_initialize_tracer' start_em.f90:(.text+0xe195): undefined reference to `chem_init_' start_em.f90:(.text+0xf3de): undefined reference to `__module_aerosols_soa_vbs_MOD_sum_pm_soa_vbs' start_em.f90:(.text+0x10d57): undefined reference to `__module_gocart_aerosols_MOD_sum_pm_gocart' start_em.f90:(.text+0x154b9): undefined reference to `__module_mosaic_driver_MOD_sum_pm_mosaic' start_em.f90:(.text+0x26980): undefined reference to `__module_aerosols_sorgam_MOD_sum_pm_sorgam' libwrflib.a(module_cu_kfcup.o): In function `__module_cu_kfcup_MOD_kf_cup_cps': module_cu_kfcup.f90:(.text+0x2f860): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x2f865): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x2f86a): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x2f86f): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x2f874): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x2f879): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x2f87e): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x2f883): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x2f888): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x2f88d): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x2f892): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x2f897): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x33423): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x33428): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x3342d): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x33432): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x33437): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x3343c): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x33441): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x33446): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x3344b): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x33450): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x33455): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x3345a): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x35b41): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x35b46): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x35b4b): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x35b50): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x35b55): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x35b5a): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x35b5f): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x35b64): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x35b69): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x35b6e): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x35b73): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x35b78): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' collect2: error: ld returned 1 exit status Command exited with non-zero status 1 0.31user 0.09system 0:00.70elapsed 58%CPU (0avgtext+0avgdata 69924maxresident)k 1080inputs+101968outputs (0major+16301minor)pagefaults 0swaps Makefile:28: recipe for target 'em_real' failed make[1]: [em_real] Error 1 (ignored) #TEMPORARILY REMOVED time mpif90 -f90=gfortran -o nup.exe -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 nup_em.o ../dyn_em/module_initialize_real.o libwrflib.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5/libfftpack.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/libio_grib1.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share/libio_grib_share.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int/libwrfio_int.a -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/librsl_lite.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/module_internal_header_util.o /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/pack_utils.o -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -lwrfio_nf -L/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/lib -lnetcdff -lnetcdf time mpif90 -f90=gfortran -o tc.exe -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 tc_em.o ../dyn_em/module_initialize_real.o libwrflib.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5/libfftpack.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/libio_grib1.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share/libio_grib_share.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int/libwrfio_int.a -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/librsl_lite.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/module_internal_header_util.o /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/pack_utils.o -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -lwrfio_nf -L/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/lib -lnetcdff -lnetcdf libwrflib.a(start_em.o): In function `start_domain_em_': start_em.f90:(.text+0xc299): undefined reference to `__module_input_tracer_MOD_initialize_tracer' start_em.f90:(.text+0xe195): undefined reference to `chem_init_' start_em.f90:(.text+0xf3de): undefined reference to `__module_aerosols_soa_vbs_MOD_sum_pm_soa_vbs' start_em.f90:(.text+0x10d57): undefined reference to `__module_gocart_aerosols_MOD_sum_pm_gocart' start_em.f90:(.text+0x154b9): undefined reference to `__module_mosaic_driver_MOD_sum_pm_mosaic' start_em.f90:(.text+0x26980): undefined reference to `__module_aerosols_sorgam_MOD_sum_pm_sorgam' libwrflib.a(module_cu_kfcup.o): In function `__module_cu_kfcup_MOD_kf_cup_cps': module_cu_kfcup.f90:(.text+0x2f860): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x2f865): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x2f86a): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x2f86f): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x2f874): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x2f879): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x2f87e): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x2f883): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x2f888): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x2f88d): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x2f892): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x2f897): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x33423): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x33428): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x3342d): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x33432): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x33437): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x3343c): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x33441): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x33446): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x3344b): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x33450): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x33455): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x3345a): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x35b41): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x35b46): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x35b4b): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x35b50): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x35b55): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x35b5a): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x35b5f): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x35b64): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x35b69): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x35b6e): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x35b73): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x35b78): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' collect2: error: ld returned 1 exit status Command exited with non-zero status 1 0.38user 0.08system 0:00.48elapsed 95%CPU (0avgtext+0avgdata 70200maxresident)k 0inputs+100512outputs (0major+15994minor)pagefaults 0swaps Makefile:28: recipe for target 'em_real' failed make[1]: [em_real] Error 1 (ignored) time mpif90 -f90=gfortran -o real.exe -O2 -ftree-vectorize -funroll-loops -w -ffree-form -ffree-line-length-none -fconvert=big-endian -frecord-marker=4 real_em.o ../dyn_em/module_initialize_real.o libwrflib.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/fftpack/fftpack5/libfftpack.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib1/libio_grib1.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_grib_share/libio_grib_share.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int/libwrfio_int.a -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -lesmf_time /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/RSL_LITE/librsl_lite.a /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/module_internal_header_util.o /home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame/pack_utils.o -L/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -lwrfio_nf -L/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/lib -lnetcdff -lnetcdf real_em.o: In function `med_sidata_input_': real_em.f90:(.text+0xeb49): undefined reference to `__module_input_chem_data_MOD_input_chem_profile' libwrflib.a(start_em.o): In function `start_domain_em_': start_em.f90:(.text+0xc299): undefined reference to `__module_input_tracer_MOD_initialize_tracer' start_em.f90:(.text+0xe195): undefined reference to `chem_init_' start_em.f90:(.text+0xf3de): undefined reference to `__module_aerosols_soa_vbs_MOD_sum_pm_soa_vbs' start_em.f90:(.text+0x10d57): undefined reference to `__module_gocart_aerosols_MOD_sum_pm_gocart' start_em.f90:(.text+0x154b9): undefined reference to `__module_mosaic_driver_MOD_sum_pm_mosaic' start_em.f90:(.text+0x26980): undefined reference to `__module_aerosols_sorgam_MOD_sum_pm_sorgam' libwrflib.a(module_cu_kfcup.o): In function `__module_cu_kfcup_MOD_kf_cup_cps': module_cu_kfcup.f90:(.text+0x2f860): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x2f865): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x2f86a): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x2f86f): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x2f874): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x2f879): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x2f87e): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x2f883): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x2f888): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x2f88d): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x2f892): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x2f897): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x33423): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x33428): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x3342d): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x33432): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x33437): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x3343c): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x33441): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x33446): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x3344b): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x33450): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x33455): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x3345a): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' module_cu_kfcup.f90:(.text+0x35b41): undefined reference to `__module_data_mosaic_asect_MOD_sigmag_aer' module_cu_kfcup.f90:(.text+0x35b46): undefined reference to `__module_data_mosaic_asect_MOD_hygro_aer' module_cu_kfcup.f90:(.text+0x35b4b): undefined reference to `__module_data_mosaic_asect_MOD_dens_aer' module_cu_kfcup.f90:(.text+0x35b50): undefined reference to `__module_data_mosaic_asect_MOD_dhi_sect' module_cu_kfcup.f90:(.text+0x35b55): undefined reference to `__module_data_mosaic_asect_MOD_dlo_sect' module_cu_kfcup.f90:(.text+0x35b5a): undefined reference to `__module_data_mosaic_asect_MOD_numptr_aer' module_cu_kfcup.f90:(.text+0x35b5f): undefined reference to `__module_data_mosaic_asect_MOD_massptr_aer' module_cu_kfcup.f90:(.text+0x35b64): undefined reference to `__module_data_mosaic_asect_MOD_msectional' module_cu_kfcup.f90:(.text+0x35b69): undefined reference to `__module_data_mosaic_asect_MOD_ai_phase' module_cu_kfcup.f90:(.text+0x35b6e): undefined reference to `__module_data_mosaic_asect_MOD_ncomp_aer' module_cu_kfcup.f90:(.text+0x35b73): undefined reference to `__module_data_mosaic_asect_MOD_nsize_aer' module_cu_kfcup.f90:(.text+0x35b78): undefined reference to `__module_data_mosaic_asect_MOD_ntype_aer' collect2: error: ld returned 1 exit status Command exited with non-zero status 1 0.27user 0.07system 0:00.37elapsed 93%CPU (0avgtext+0avgdata 70172maxresident)k 0inputs+101728outputs (0major+16435minor)pagefaults 0swaps Makefile:28: recipe for target 'em_real' failed make[1]: [em_real] Error 1 (ignored) make[1]: Leaving directory '/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main' ( cd test/em_real ; /bin/rm -f wrf.exe ; ln -s ../../main/wrf.exe . ) if [ 0 -eq 1 ] ; then \ ( cd main ; make -i -r RLFLAGS="" MODULE_DIRS="-I../dyn_em -I../dyn_nmm -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/esmf_time_f90 -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/main -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_netcdf -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/external/io_int -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/frame -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/share -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/phys -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/chem -I/home/vijay/Desktop/WRF/Build_WRF/WRFCHEM/WRFV3/inc -I/home/vijay/Desktop/WRF/Build_WRF/LIBRARIES/netcdf/include " SOLVER=em IDEAL_CASE=real em_wrf_SST_ESMF ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f wrf.exe ; ln -s ../../main/wrf.exe . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f wrf_SST_ESMF.exe ; ln -s ../../main/wrf_SST_ESMF.exe . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f real.exe ; ln -s ../../main/real.exe . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f README.namelist ; ln -s ../../run/README.namelist . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f ETAMPNEW_DATA.expanded_rain ETAMPNEW_DATA RRTM_DATA RRTMG_LW_DATA RRTMG_SW_DATA ; \ ln -sf ../../run/ETAMPNEW_DATA . ; \ ln -sf ../../run/ETAMPNEW_DATA.expanded_rain . ; \ ln -sf ../../run/RRTM_DATA . ; \ ln -sf ../../run/RRTMG_LW_DATA . ; \ ln -sf ../../run/RRTMG_SW_DATA . ; \ ln -sf ../../run/CAM_ABS_DATA . ; \ ln -sf ../../run/CAM_AEROPT_DATA . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.RCP4.5 . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.RCP6 . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.RCP8.5 CAMtr_volume_mixing_ratio ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.A1B . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.A2 . ; \ ln -sf ../../run/CLM_ALB_ICE_DFS_DATA . ; \ ln -sf ../../run/CLM_ALB_ICE_DRC_DATA . ; \ ln -sf ../../run/CLM_ASM_ICE_DFS_DATA . ; \ ln -sf ../../run/CLM_ASM_ICE_DRC_DATA . ; \ ln -sf ../../run/CLM_DRDSDT0_DATA . ; \ ln -sf ../../run/CLM_EXT_ICE_DFS_DATA . ; \ ln -sf ../../run/CLM_EXT_ICE_DRC_DATA . ; \ ln -sf ../../run/CLM_KAPPA_DATA . ; \ ln -sf ../../run/CLM_TAU_DATA . ; \ ln -sf ../../run/ozone.formatted . ; \ ln -sf ../../run/ozone_lat.formatted . ; \ ln -sf ../../run/ozone_plev.formatted . ; \ ln -sf ../../run/aerosol.formatted . ; \ ln -sf ../../run/aerosol_lat.formatted . ; \ ln -sf ../../run/aerosol_lon.formatted . ; \ ln -sf ../../run/aerosol_plev.formatted . ; \ ln -sf ../../run/CCN_ACTIVATE.BIN . ; \ ln -sf ../../run/p3_lookup_table_1.dat . ; \ if [ 4 -eq 8 ] ; then \ ln -sf ../../run/ETAMPNEW_DATA_DBL ETAMPNEW_DATA ; \ ln -sf ../../run/ETAMPNEW_DATA.expanded_rain_DBL ETAMPNEW_DATA.expanded_rain ; \ ln -sf ../../run/RRTM_DATA_DBL RRTM_DATA ; \ ln -sf ../../run/RRTMG_LW_DATA_DBL RRTMG_LW_DATA ; \ ln -sf ../../run/RRTMG_SW_DATA_DBL RRTMG_SW_DATA ; \ fi ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f GENPARM.TBL ; ln -s ../../run/GENPARM.TBL . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f LANDUSE.TBL ; ln -s ../../run/LANDUSE.TBL . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f SOILPARM.TBL ; ln -s ../../run/SOILPARM.TBL . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f URBPARM.TBL ; ln -s ../../run/URBPARM.TBL . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f VEGPARM.TBL ; ln -s ../../run/VEGPARM.TBL . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f MPTABLE.TBL ; ln -s ../../run/MPTABLE.TBL . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f tr49t67 ; ln -s ../../run/tr49t67 . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f tr49t85 ; ln -s ../../run/tr49t85 . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f tr67t85 ; ln -s ../../run/tr67t85 . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f gribmap.txt ; ln -s ../../run/gribmap.txt . ) ; \ ( cd test/em_esmf_exp ; /bin/rm -f grib2map.tbl ; ln -s ../../run/grib2map.tbl . ) ; \ fi ( cd test/em_real ; /bin/rm -f real.exe ; ln -s ../../main/real.exe . ) ( cd test/em_real ; /bin/rm -f tc.exe ; ln -s ../../main/tc.exe . ) ( cd test/em_real ; /bin/rm -f ndown.exe ; ln -s ../../main/ndown.exe . ) #TEMPORARILY REMOVED ( cd test/em_real ; /bin/rm -f nup.exe ; ln -s ../../main/nup.exe . ) ( cd test/em_real ; /bin/rm -f README.namelist ; ln -s ../../run/README.namelist . ) ( cd test/em_real ; /bin/rm -f ETAMPNEW_DATA.expanded_rain ETAMPNEW_DATA RRTM_DATA RRTMG_LW_DATA RRTMG_SW_DATA ; \ ln -sf ../../run/ETAMPNEW_DATA . ; \ ln -sf ../../run/ETAMPNEW_DATA.expanded_rain . ; \ ln -sf ../../run/RRTM_DATA . ; \ ln -sf ../../run/RRTMG_LW_DATA . ; \ ln -sf ../../run/RRTMG_SW_DATA . ; \ ln -sf ../../run/CAM_ABS_DATA . ; \ ln -sf ../../run/CAM_AEROPT_DATA . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.RCP4.5 . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.RCP6 . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.RCP8.5 CAMtr_volume_mixing_ratio ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.A1B . ; \ ln -sf ../../run/CAMtr_volume_mixing_ratio.A2 . ; \ ln -sf ../../run/CLM_ALB_ICE_DFS_DATA . ; \ ln -sf ../../run/CLM_ALB_ICE_DRC_DATA . ; \ ln -sf ../../run/CLM_ASM_ICE_DFS_DATA . ; \ ln -sf ../../run/CLM_ASM_ICE_DRC_DATA . ; \ ln -sf ../../run/CLM_DRDSDT0_DATA . ; \ ln -sf ../../run/CLM_EXT_ICE_DFS_DATA . ; \ ln -sf ../../run/CLM_EXT_ICE_DRC_DATA . ; \ ln -sf ../../run/CLM_KAPPA_DATA . ; \ ln -sf ../../run/CLM_TAU_DATA . ; \ ln -sf ../../run/ozone.formatted . ; \ ln -sf ../../run/ozone_lat.formatted . ; \ ln -sf ../../run/ozone_plev.formatted . ; \ ln -sf ../../run/aerosol.formatted . ; \ ln -sf ../../run/aerosol_lat.formatted . ; \ ln -sf ../../run/aerosol_lon.formatted . ; \ ln -sf ../../run/aerosol_plev.formatted . ; \ ln -sf ../../run/capacity.asc . ; \ ln -sf ../../run/coeff_p.asc . ; \ ln -sf ../../run/coeff_q.asc . ; \ ln -sf ../../run/constants.asc . ; \ ln -sf ../../run/masses.asc . ; \ ln -sf ../../run/termvels.asc . ; \ ln -sf ../../run/kernels.asc_s_0_03_0_9 . ; \ ln -sf ../../run/kernels_z.asc . ; \ ln -sf ../../run/bulkdens.asc_s_0_03_0_9 . ; \ ln -sf ../../run/bulkradii.asc_s_0_03_0_9 . ; \ ln -sf ../../run/CCN_ACTIVATE.BIN . ; \ ln -sf ../../run/p3_lookup_table_1.dat . ; \ if [ 4 -eq 8 ] ; then \ ln -sf ../../run/ETAMPNEW_DATA_DBL ETAMPNEW_DATA ; \ ln -sf ../../run/ETAMPNEW_DATA.expanded_rain_DBL ETAMPNEW_DATA.expanded_rain ; \ ln -sf ../../run/RRTM_DATA_DBL RRTM_DATA ; \ ln -sf ../../run/RRTMG_LW_DATA_DBL RRTMG_LW_DATA ; \ ln -sf ../../run/RRTMG_SW_DATA_DBL RRTMG_SW_DATA ; \ fi ) ( cd test/em_real ; /bin/rm -f GENPARM.TBL ; ln -s ../../run/GENPARM.TBL . ) ( cd test/em_real ; /bin/rm -f LANDUSE.TBL ; ln -s ../../run/LANDUSE.TBL . ) ( cd test/em_real ; /bin/rm -f SOILPARM.TBL ; ln -s ../../run/SOILPARM.TBL . ) ( cd test/em_real ; /bin/rm -f URBPARM.TBL ; ln -s ../../run/URBPARM.TBL . ) ( cd test/em_real ; /bin/rm -f VEGPARM.TBL ; ln -s ../../run/VEGPARM.TBL . ) ( cd test/em_real ; /bin/rm -f MPTABLE.TBL ; ln -s ../../run/MPTABLE.TBL . ) ( cd test/em_real ; /bin/rm -f tr49t67 ; ln -s ../../run/tr49t67 . ) ( cd test/em_real ; /bin/rm -f tr49t85 ; ln -s ../../run/tr49t85 . ) ( cd test/em_real ; /bin/rm -f tr67t85 ; ln -s ../../run/tr67t85 . ) ( cd test/em_real ; /bin/rm -f gribmap.txt ; ln -s ../../run/gribmap.txt . ) ( cd test/em_real ; /bin/rm -f grib2map.tbl ; ln -s ../../run/grib2map.tbl . ) ( cd run ; /bin/rm -f real.exe ; ln -s ../main/real.exe . ) ( cd run ; /bin/rm -f tc.exe ; ln -s ../main/tc.exe . ) ( cd run ; /bin/rm -f ndown.exe ; ln -s ../main/ndown.exe . ) #TEMPORARILY REMOVED ( cd run ; /bin/rm -f nup.exe ; ln -s ../main/nup.exe . ) ( cd run ; if test -f namelist.input ; then \ /bin/cp -f namelist.input namelist.input.backup.`date +%Y-%m-%d_%H_%M_%S` ; fi ; \ /bin/rm -f namelist.input ; cp ../test/em_real/namelist.input . ) ========================================================================== build started: Thu Dec 7 12:18:15 IST 2017 build completed: Thu Dec 7 12:19:28 IST 2017 ---> Problems building executables, look for errors in the build log <--- ==========================================================================