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<p class="MsoNormal">Good afternoon all,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">My colleagues and I are attempting to get WRF running on a new high-performance computing cluster that we recently purchased. It is compiled using intel/fortran compilers and DMPAR. When simply typing “./wrf.exe”, it runs without a problem.
However, when we try to run it in parallel (“time mpirun -hostfile machines_1 -l -n 28 ./wrf.exe”), we get the following errors. (please see message transcript below). Any proposed help to resolve this problem would be greatly appreciated. Thanks for your
help.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">-Elliot<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">[0] starting wrf task 0 of 28<o:p></o:p></p>
<p class="MsoNormal">[0] error_dup: cannot open rsl.out.nnnn: Permission denied<o:p></o:p></p>
<p class="MsoNormal">[0] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[9] starting wrf task 9 of 28<o:p></o:p></p>
<p class="MsoNormal">[9] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[9] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[0] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[11] starting wrf task 11 of 28<o:p></o:p></p>
<p class="MsoNormal">[11] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[11] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[10] starting wrf task 10 of 28<o:p></o:p></p>
<p class="MsoNormal">[10] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[10] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[6] starting wrf task 6 of 28<o:p></o:p></p>
<p class="MsoNormal">[6] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[6] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[8] starting wrf task 8 of 28<o:p></o:p></p>
<p class="MsoNormal">[8] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[8] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[8] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[9] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[10] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[11] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[23] starting wrf task 23 of 28<o:p></o:p></p>
<p class="MsoNormal">[23] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[23] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[3] starting wrf task 3 of 28<o:p></o:p></p>
<p class="MsoNormal">[3] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[3] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[25] starting wrf task 25 of 28<o:p></o:p></p>
<p class="MsoNormal">[14] starting wrf task 14 of 28<o:p></o:p></p>
<p class="MsoNormal">[14] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[14] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[25] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[25] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[19] starting wrf task 19 of 28<o:p></o:p></p>
<p class="MsoNormal">[19] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[19] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[27] starting wrf task 27 of 28<o:p></o:p></p>
<p class="MsoNormal">[27] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[27] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[4] starting wrf task 4 of 28<o:p></o:p></p>
<p class="MsoNormal">[4] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[4] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[4] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[5] starting wrf task 5 of 28<o:p></o:p></p>
<p class="MsoNormal">[5] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[5] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[5] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[6] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[21] starting wrf task 21 of 28<o:p></o:p></p>
<p class="MsoNormal">[21] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[21] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[18] starting wrf task 18 of 28<o:p></o:p></p>
<p class="MsoNormal">[18] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[18] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[2] starting wrf task 2 of 28<o:p></o:p></p>
<p class="MsoNormal">[2] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[2] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[2] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[3] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[24] starting wrf task 24 of 28<o:p></o:p></p>
<p class="MsoNormal">[7] starting wrf task 7 of 28<o:p></o:p></p>
<p class="MsoNormal">[24] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[24] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[16] starting wrf task 16 of 28<o:p></o:p></p>
<p class="MsoNormal">[7] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[7] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[7] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[16] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[16] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[16] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[18] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[19] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[24] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[25] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[1] starting wrf task 1 of 28<o:p></o:p></p>
<p class="MsoNormal">[1] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[1] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[1] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[15] starting wrf task 15 of 28<o:p></o:p></p>
<p class="MsoNormal">[15] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[15] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[12] starting wrf task 12 of 28<o:p></o:p></p>
<p class="MsoNormal">[26] starting wrf task 26 of 28<o:p></o:p></p>
<p class="MsoNormal">[12] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[12] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[12] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[14] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[15] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[26] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[26] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[26] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[27] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[13] starting wrf task 13 of 28<o:p></o:p></p>
<p class="MsoNormal">[13] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[13] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[13] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[17] starting wrf task 17 of 28<o:p></o:p></p>
<p class="MsoNormal">[17] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[17] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[17] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[20] starting wrf task 20 of 28<o:p></o:p></p>
<p class="MsoNormal">[20] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[20] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[20] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[21] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[22] starting wrf task 22 of 28<o:p></o:p></p>
<p class="MsoNormal">[22] error_dup: cannot open rsl.out.nnnn: Read-only file system<o:p></o:p></p>
<p class="MsoNormal">[22] ...sending output to standard output and continuing.<o:p></o:p></p>
<p class="MsoNormal">[22] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[23] module_io_quilt_old.F 2931 F<o:p></o:p></p>
<p class="MsoNormal">[4] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[5] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[7] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[11] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[1] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[2] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[3] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[6] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[8] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[9] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[10] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[12] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[13] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[14] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[15] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[16] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[17] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[18] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[19] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[20] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[21] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[22] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[23] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[24] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[25] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[26] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[27] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[2] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[4] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[5] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[7] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[10] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[11] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[12] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[13] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[15] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[16] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[18] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[20] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[21] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[23] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[25] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[27] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[1] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[3] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[6] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[8] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[9] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[14] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[17] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[19] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[22] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[24] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[26] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[0] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[0] Quilting with 1 groups of 0 I/O tasks.<o:p></o:p></p>
<p class="MsoNormal">[0] -------------- FATAL CALLED ---------------<o:p></o:p></p>
<p class="MsoNormal">[0] FATAL CALLED FROM FILE: <stdin> LINE: 8432<o:p></o:p></p>
<p class="MsoNormal">[0] ERROR OPENING namelist.output<o:p></o:p></p>
<p class="MsoNormal">[0] -------------------------------------------<o:p></o:p></p>
<p class="MsoNormal">[0] -------------- FATAL CALLED ---------------<o:p></o:p></p>
<p class="MsoNormal">[0] FATAL CALLED FROM FILE: <stdin> LINE: 8432<o:p></o:p></p>
<p class="MsoNormal">[0] ERROR OPENING namelist.output<o:p></o:p></p>
<p class="MsoNormal">[0] -------------------------------------------<o:p></o:p></p>
<p class="MsoNormal">[0] [cli_0]: aborting job:<o:p></o:p></p>
<p class="MsoNormal">[0] application called MPI_Abort(MPI_COMM_WORLD, 1) - process 0<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">===================================================================================<o:p></o:p></p>
<p class="MsoNormal">= BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES<o:p></o:p></p>
<p class="MsoNormal">= PID 57376 RUNNING AT compute-01<o:p></o:p></p>
<p class="MsoNormal">= EXIT CODE: 1<o:p></o:p></p>
<p class="MsoNormal">= CLEANING UP REMAINING PROCESSES<o:p></o:p></p>
<p class="MsoNormal">= YOU CAN IGNORE THE BELOW CLEANUP MESSAGES<o:p></o:p></p>
<p class="MsoNormal">===================================================================================<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Elliot Tardif, Meteorologist II<o:p></o:p></p>
<p class="MsoNormal">NC DEQ, Division of Air Quality<o:p></o:p></p>
<p class="MsoNormal">Planning Section, Attainment Planning Branch<o:p></o:p></p>
<p class="MsoNormal">1641 Mail Service Center<o:p></o:p></p>
<p class="MsoNormal">Raleigh, NC 27699-1641<o:p></o:p></p>
<p class="MsoNormal">Phone/Fax: 919-707-8483<o:p></o:p></p>
<p class="MsoNormal">Email: <a href="mailto:elliot.tardif@ncdenr.gov"><span style="color:#0563C1">elliot.tardif@ncdenr.gov</span></a><o:p></o:p></p>
<p class="MsoNormal"><a href="http://www.ncair.org/"><span style="color:blue">http://www.ncair.org</span></a><o:p></o:p></p>
<p class="MsoNormal"><img border="0" width="306" height="66" style="width:3.1875in;height:.6875in" id="Picture_x0020_2" src="cid:image001.png@01D2E130.47DFE120" alt="cid:image001.png@01D1058E.93ED1C60"><span style="color:#1F497D"><o:p></o:p></span></p>
<p class="MsoNormal"><i><span style="font-size:9.0pt;font-family:"Arial",sans-serif;color:gray">Email correspondence to and from this address is subject to the<o:p></o:p></span></i></p>
<p class="MsoNormal"><i><span style="font-size:9.0pt;font-family:"Arial",sans-serif;color:gray">North Carolina Public Records Law and may be disclosed to third parties.<o:p></o:p></span></i></p>
<p class="MsoNormal"><o:p> </o:p></p>
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