[Wrf-users] memory space for long simulations

Don Morton don.morton at borealscicomp.com
Thu Nov 12 09:10:40 MST 2015


Hello,

I'm guessing that you could compile with WRFIO_NCD_LARGE_FILE_SUPPORT and
get around the restriction.  Please see Q17 in the following:

http://www2.mmm.ucar.edu/wrf/users/FAQ_files/FAQ_wrf_runtime.html


You might also need to make sure your NetCDF is compiled for large memory
support (it might be by default, but I can't remember for sure).

---
Don Morton, Owner/Manager
Boreal Scientific Computing LLC
Fairbanks, Alaska USA
http://www.borealscicomp.com/
http://www.borealscicomp.com/Miscellaneous/MortonBio/

On Thu, Nov 12, 2015 at 10:55 AM, afwande juliet <afwandej965 at gmail.com>
wrote:

> Hi all users
>
> How do users go about this issue of frames_per_outfile? I am doing 5years
> simulations for 3 different cases. The interval_seconds =21600(6hours).
> That means each case there will be 7300files*3=22000files(total files).
> I read somewhere that max space for frames_per_outputfile=2GB. I guess if
> the 5years run is complete the total disk space will be 20T which the
> cluster am using has .
> I don't want to have many files; If possible all files in one big file BUT
> I am afraid doing this will make model stop giving output due to
> insufficient memory.
>
> Can someone help me how to go about this!!
>
>
> &time_control
>  !run_days                            = 0,
>  !run_hours                           = 96,
>  !run_minutes                         = 0,
>  !run_seconds                         = 0,
>  start_year                          = 1997,
>  start_month                         = 02,
>  start_day                           = 01,
>  start_hour                          = 00,
>  start_minute                        = 00,
>  start_second                        = 00,
>  end_year                            = 2006,
>  end_month                           = 12,
>  end_day                             = 31,
>  end_hour                            = 00,
>  end_minute                          = 00,
>  end_second                          = 00
>  interval_seconds                    = 21600
>  input_from_file                     = .false.,
>  history_interval                    = 180,
>  frames_per_outfile                  = 100,
>  restart                             = .false.,
>  restart_interval                    = 1440,
>  io_form_history                     = 2
>  io_form_restart                     = 2
>  io_form_input                       = 2
>  io_form_boundary                    = 2
>  debug_level                         = 100
>  auxinput4_inname                    = "wrflowinp_d<domain>"
>  auxinput4_interval                  = 360,
>  io_form_auxinput4                   = 2,
>   /
>  &domains
>  time_step                           = 200,
>  time_step_fract_num                 = 0,
>  time_step_fract_den                 = 1,
>  max_dom                             = 1,
>  e_we                                = 250,
>  e_sn                                = 150,
>  e_vert                              = 51,
>  p_top_requested                     = 5000,
>  num_metgrid_levels                  = 38,
>  num_metgrid_soil_levels             = 4,
>  dx                                  = 36000, 12000,  3333.33,
>  dy                                  = 36000, 12000,  3333.33,
>  grid_id                             = 1,
>  parent_id                           = 0,
>  i_parent_start                      = 1,
>  j_parent_start                      = 1,
>  parent_grid_ratio                   = 1,
>  parent_time_step_ratio              = 1,
>  feedback                            = 1,
>  smooth_option                       = 0,
>   /
>  &physics
>  mp_physics                          = 6,
>  ra_lw_physics                       = 4,
>  ra_sw_physics                       = 4,
>  radt                                = 30,
>  sf_sfclay_physics                   = 1,
>  sf_surface_physics                  = 2,
>  bl_pbl_physics                      = 1,
>  bldt                                = 0,
>  cu_physics                          = 1,
>  cudt                                = 5,
>  kfeta_trigger                       = 1,
>  cu_rad_feedback                     = .true.,
>  isfflx                              = 1,
>  sst_update                          = 1,
>  tmn_update                          = 1,
>  sst_skin                            = 1,
>  bucket_mm                           = 100.0,
>  bucket_J                            = 1.e9,
>  ifsnow                              = 1,
>  icloud                              = 1,
>  surface_input_source                = 1,
>  num_soil_layers                     = 4,
>  sf_urban_physics                    = 0,
>   /
>  &fdda
>  grid_fdda = 2,
>  gfdda_inname = "wrffdda_d<domain>",
>  gfdda_interval_m = 360,
>  gfdda_end_h = 52560,
>  io_form_gfdda = 2,
>  fgdt = 0,
>  if_no_pbl_nudging_uv = 1,
>  if_no_pbl_nudging_t = 1,
>  if_no_pbl_nudging_q = 1,
>  if_no_pbl_nudging_ph = 1,
>  if_zfac_uv = 1,
>  k_zfac_uv = 18,
>  if_zfac_t = 1,
>  k_zfac_t = 18,
>  if_zfac_q = 1,
>  k_zfac_q = 18,
>  if_zfac_ph = 1,
>  k_zfac_ph = 18,
>  guv = 0.0003,
>  gt = 0.0003,
>  gq = 0.0003,
>  gph = 0.0003,
>  xwavenum = 9,
>  ywavenum = 5,
>  if_ramping = 0,
>  dtramp_min = 60.0,
>   /
>  &dynamics
>  w_damping                           = 1,
>  diff_opt                            = 1,      1,      1,
>  km_opt                              = 4,      4,      4,
>  diff_6th_opt                        = 0,      0,      0,
>  diff_6th_factor                     = 0.12,   0.12,   0.12,
>  base_temp                           = 290.
>  damp_opt                            = 3,
>  zdamp                               = 5000.,  5000.,  5000.,
>  dampcoef                            = 0.2,    0.2,    0.2
>  khdif                               = 0,      0,      0,
>  kvdif                               = 0,      0,      0,
>  non_hydrostatic                     = .true., .true., .true.,
>  moist_adv_opt                       = 1,      1,      1,
>  scalar_adv_opt                      = 1,      1,      1,
>  /
>  &bdy_control
>  spec_bdy_width                      = 10,
>  spec_zone                           = 1,
>  relax_zone                          = 9,
>  specified                           = .true., .false.,.false.,
>  nested                              = .false., .true., .true.,
>  spec_exp                            = 0.33,
>  /
>  &grib2
>  /
>  &namelist_quilt
>  nio_tasks_per_group = 0,
>  nio_groups = 1,
>  /
>
>
>
> Thanks afwande
>
> 1
>
>
> _______________________________________________
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> Wrf-users at ucar.edu
> http://mailman.ucar.edu/mailman/listinfo/wrf-users
>
>
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