[Wrf-users] Errors in compiling geogrid.exe in WPS
Dominikus Heinzeller
climbfuji at ymail.com
Wed Jul 16 23:34:38 MDT 2014
Hi,
I might be wrong but it looks like the order of the netcdf libraries is wrong:
...
WRF_LIB = $(WRF_DIR)/external/io_grib1/libio_grib1.a \
$(WRF_DIR)/external/io_grib_share/libio_grib_share.a \
$(WRF_DIR)/external/io_int/libwrfio_int.a \
$(WRF_DIR)/external/io_netcdf/libwrfio_nf.a \
$(NETCDF)/lib/libnetcdf.a \
$(NETCDF)/lib/libnetcdff.a
..
try instead:
...
WRF_LIB = $(WRF_DIR)/external/io_grib1/libio_grib1.a \
$(WRF_DIR)/external/io_grib_share/libio_grib_share.a \
$(WRF_DIR)/external/io_int/libwrfio_int.a \
$(WRF_DIR)/external/io_netcdf/libwrfio_nf.a \
$(NETCDF)/lib/libnetcdff.a \
$(NETCDF)/lib/libnetcdf.a
...
Cheers
Dom
On 16/07/2014, at 4:21 pm, ashwinD12 . <winash12 at gmail.com> wrote:
> Since WRF 3.6 compiled correctly why do I get these linking errors in WPS 's geogrid.exe -
>
> SUFFIXES: .F .f .c .o
>
> SHELL = /bin/sh
>
> NCARG_LIBS = -L$(NCARG_ROOT)/lib -lncarg -lncarg_gks -lncarg_
> c \
> -L/usr/X11R6/lib -lX11
>
> NCARG_LIBS2 = # May be overridden by architecture specific val
> ue below
>
> FDEFS = -DUSE_JPEG2000 -DUSE_PNG
>
> # Listing of options that are usually independent of machine type.
> # When necessary, these are over-ridden by each architecture.
>
> ARFLAGS =
>
> PERL = perl
>
> RANLIB = echo
>
> COMPILING_ON_CYGWIN_NT = yes
>
> WRF_INCLUDE = -I$(WRF_DIR)/external/io_netcdf \
> -I$(WRF_DIR)/external/io_grib_share \
> -I$(WRF_DIR)/external/io_grib1 \
> -I$(WRF_DIR)/external/io_int \
> -I$(WRF_DIR)/inc \
> -I$(NETCDF)/include
>
> WRF_LIB = -L$(WRF_DIR)/external/io_grib1 -lio_grib1 \
> -L$(WRF_DIR)/external/io_grib_share -lio_grib_share \
> -L$(WRF_DIR)/external/io_int -lwrfio_int \
> -L$(WRF_DIR)/external/io_netcdf -lwrfio_nf \
> -L$(NETCDF)/lib -lnetcdff -lnetcdf
>
>
> COMPRESSION_LIBS = # intentionally left blank, fill in COMPRESSION_LIBS
> below
>
> COMPRESSION_INC = # intentionally left blank, fill in COMPRESSION_INC b
> elow
>
> #
> # Settings for CYGWIN_NT i686 x86_64 PGI compiler on Windows (serial)
> #
> #
> COMPRESSION_LIBS = -L/usr/local/lib -ljasper -lpng -lz
> COMPRESSION_INC = -I/usr/local/include/jasper
> FDEFS = -DUSE_JPEG2000 -DUSE_PNG
> #NCARG_LIBS2 = -L${PGI}/linux86/6.1/lib -lpgftnrtl -lpgc \
> # -L/usr/lib/gcc-lib/i386-redhat-linux/3.2.3 -lg2c
> WRF_LIB = $(WRF_DIR)/external/io_grib1/libio_grib1.a \
> $(WRF_DIR)/external/io_grib_share/libio_grib_share.a \
> $(WRF_DIR)/external/io_int/libwrfio_int.a \
> $(WRF_DIR)/external/io_netcdf/libwrfio_nf.a \
> $(NETCDF)/lib/libnetcdf.a \
> $(NETCDF)/lib/libnetcdff.a
> SFC = gfortran
> SCC = gcc
> DM_FC = mpif90 -f90=$(SFC)
> DM_CC = mpicc -cc=$(SCC)
> FC = $(SFC)
> CC = $(SCC)
> LD = $(SFC)
> FFLAGS = -ffree-form -ffree-line-length-none -O -fconvert=big-endia
> n -frecord-marker=4
> F77FLAGS = -ffree-form -O -fconvert=big-endian -frecord-marker=4
> FCSUFFIX =
> FNGFLAGS = $(FFLAGS)
> LDFLAGS = -g
> CFLAGS = -g
> CPP = /lib/cpp -C -P
> CPPFLAGS = -D_UNDERSCORE -DBYTESWAP -DWIN32 -DIO_NETCDF -DIO_BINARY -
> DIO_GRIB1 -DBIT32
> ARFLAGS =
>
> ################################################################################
> ########################################
> #
> # Macros, these should be generic for all machines
>
> LN = ln -sf
> MAKE = make -i -r
> RM = /bin/rm -f
> CP = /bin/cp
> AR = ar ru
>
> .IGNORE:
> .SUFFIXES: .c .f .F .o
>
> # There is probably no reason to modify these rules
>
> .c.o:
> $(RM) $@
> $(CC) $(CPPFLAGS) $(CFLAGS) -c $<
>
> .f.o:
> $(RM) $@ $*.mod
> $(FC) $(F77FLAGS) -c $< $(WRF_INCLUDE)
>
> .F.o:
> $(RM) $@ $*.mod
> $(CPP) $(CPPFLAGS) $(FDEFS) $(WRF_INCLUDE) $< > $*.f90
> $(FC) $(FFLAGS) -c $*.f90 $(WRF_INCLUDE)
> # $(RM) $*.f90
>
>
>
> And here is my log file
>
>
> gfortran -g -o geogrid.exe cio.o wrf_debug.o bitarray_module.o constants_module.o module_stringutil.o geogrid.o gridinfo_module.o hash_module.o interp_module.o list_module.o llxy_module.o misc_definitions_module.o module_debug.o module_map_utils.o output_module.o parallel_module.o process_tile_module.o proc_point_module.o queue_module.o read_geogrid.o smooth_module.o source_data_module.o \
> ../../../WRFV3/frame/module_driver_constants.o \
> ../../../WRFV3/frame/pack_utils.o ../../../WRFV3/frame/module_machine.o \
> ../../../WRFV3/frame/module_internal_header_util.o \
> -I../../../WRFV3/external/io_netcdf -I../../../WRFV3/external/io_grib_share -I../../../WRFV3/external/io_grib1 -I../../../WRFV3/external/io_int -I../../../WRFV3/inc -I/home/lenovo/gz/WPS/netcdf_links/include \
> ../../../WRFV3/external/io_grib1/libio_grib1.a ../../../WRFV3/external/io_grib_share/libio_grib_share.a ../../../WRFV3/external/io_int/libwrfio_int.a ../../../WRFV3/external/io_netcdf/libwrfio_nf.a /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdf.a /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a \
>
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-misc.o): In function `nf_inq_libvers_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-misc.c:20: undefined reference to `nc_inq_libvers'
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-misc.o): In function `nf_strerror_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-misc.c:36: undefined reference to `nc_strerror'
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In function `nf_put_vara_text_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:22: undefined reference to `nc_put_vara_text'
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In function `nf_get_vara_text_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:29: undefined reference to `nc_get_vara_text'
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In function `nf_put_vara_int1_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:37: undefined reference to `nc_put_vara_schar'
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In function `nf_get_vara_int1_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:55: undefined reference to `nc_get_vara_schar'
> /home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In function `nf_put_vara_int2_':
> /home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:73: undefined reference to `nc_put_vara_short'
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