[pyngl-talk] release of Pyngl version compatible with Ncl 6.1 or Ncl 6.2.1

Charlie Koven ckoven at gmail.com
Sat Jun 20 10:13:23 MDT 2015


Hi All,

Just tried to install binaries onto a new computer (macos yosemite) and getting errors.  Any chance of making a binary for this OS version?

Thanks,
Charlie



the binaries I tried to install but didn’t work were:
PyNGL-1.5.0-beta.macos-10.9-x86_64-py278-numpy191.tar.gz
PyNIO-1.4.1.macos-10.8-x86_64-py275-numpy162.tar.gz

The versions on my computer are:
Python 2.7.10
numpy 1.9.2

uname -a
Darwin admins-MBP 14.3.0 Darwin Kernel Version 14.3.0: Mon Mar 23 11:59:05 PDT 2015; root:xnu-2782.20.48~5/RELEASE_X86_64 x86_6

gcc --version
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 6.1.0 (clang-602.0.53) (based on LLVM 3.6.0svn)
Target: x86_64-apple-darwin14.3.0
Thread model: posix





In [2]: import Nio
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
<ipython-input-2-d77b80fd2dfc> in <module>()
----> 1 import Nio

/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNIO/Nio.py in <module>()
     61 '''
     62 
---> 63 from nio import *
     64 from nio import _C_API
     65 

ImportError: dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNIO/nio.so, 2): Symbol not found: ___addtf3
  Referenced from: /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNIO/nio.so
  Expected in: /usr/lib/libSystem.B.dylib
 in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNIO/nio.so

In [3]: import Ngl
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
<ipython-input-3-ec4bb7966c2f> in <module>()
----> 1 import Ngl

/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNGL/Ngl.py in <module>()
     39 
     40 # PyNGL analysis functions
---> 41 import fplib
     42 
     43 import sys

ImportError: dlopen(/opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNGL/fplib.so, 2): Symbol not found: ___addtf3
  Referenced from: /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNGL/fplib.so
  Expected in: /usr/lib/libSystem.B.dylib
 in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/PyNGL/fplib.so

In [4]: 







> On Dec 10, 2014, at 11:22 PM, Mary Haley <haley at ucar.edu> wrote:
> 
> I have some binaries ready for you guys to try, and will keep uploading a few more (I'm doing some Python 2.7.6/numpy 1.9.1 combinations too).
> 
> https://www.pyngl.ucar.edu/Download/files/ <https://www.pyngl.ucar.edu/Download/files/>
> 
> The install and test instructions are the same as they were for 1.4.1:
> 
> http://www.pyngl.ucar.edu/Download/install_from_binary.shtml <http://www.pyngl.ucar.edu/Download/install_from_binary.shtml>
> 
> The file names should be pretty self-explanatory:
> PyNGL-1.5.0-beta.Linux-Debian-6.0-i686-py278-numpy191-gcc445.tar.gz <http://www.pyngl.ucar.edu/Download/files/PyNGL-1.5.0-beta.Linux-Debian-6.0-i686-py278-numpy191-gcc445.tar.gz>
> The above is a 32-bit binary compiled on a Debian Linux system with Python 2.7.8, NumPy 1.9.1, and gcc 4.1.2.
> 
> I only have Debian and RedHat binaries (one of the binaries has an SL name which is Scientific Linux and RedHat based).
> 
> If you have Ubuntu, then I recommend going with a Debian binary.
> 
> If you have CentOS, then try a RedHat binary.
> 
> Once you have the software installed, you can try the attached pyngltest.py script, or run one of the examples available with "pynglex":
> 
>     pynglex -l    --> to get list of examples
>     pynlgex xy1   ---> to run example "xy1.py"
> 
> 
> Many of these call Nio.open_file, so you will need to have PyNIO installed.
> 
> If you have problems with a particular PyNGL-1.5-0-beta binary, then email me with
> The name of the PyNGL binary you downloaded
> A description of your system:
> uname -a
> gcc --version
> The output from running the attached pyngltest.py script
> The "map1.ps <http://map1.ps/>" file, if it exists.
> Any other information, like error messages, flavor of linux, etc.
> 
> I haven't looked into incorporating these into anaconda or some other packaged set of Python software yet. I first just want to get them into the hands of some testers.
> 
> Thanks again for your patience. I will appreciate hearing from folks whether this new version is or isn't working for them.
> 
> --Mary
> 
> 
> 
> 
> 
> 
> 
> 
> 
> On Wed, Dec 10, 2014 at 8:38 AM, Mary Haley <haley at ucar.edu <mailto:haley at ucar.edu>> wrote:
> Hi All,
> 
> I'm sorry I haven't been responsive on this. I've been trying to find a block of time to dedicate to doing some minor updates of PyNGL and create some binaries.
> 
> I got most of the updates done, so I'll create some binaries for you to try this week.
> 
> I will use Python 2.7.8 and numpy 1.9.1 since these are the latest versions. Once I have the binaries ready and if these two versions don't work for you, let me know.
> 
> --Mary
> 
> 
> On Fri, Oct 24, 2014 at 10:59 AM, Mary Haley <haley at ucar.edu <mailto:haley at ucar.edu>> wrote:
> Hi Thomas,
> 
> I can provide you with a beta version of PyNGl that works with NCL V 6.1 (and V6.2). Just let me know what version of numpy and python you have, and what type of system (Linux, 32 or 64-bit system, version of gcc).
> 
> Our release schedule has slipped because we are still tying up lose ends with NCL.
> 
> --Mary
> 
> 
> On Fri, Oct 24, 2014 at 2:15 AM, Thomas Arsouze <thomas.arsouze at ensta-paristech.fr <mailto:thomas.arsouze at ensta-paristech.fr>> wrote:
> Dear all,
> 
> do you have any estimation when a new version of Pyngl will be available ?
> I would like to use Pyngl but only got Ncl 6.1 and later installed on the computers at my lab.
> 
> Thanks in advance.
> 
> Sincerly,
> Thomas.
> 
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