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<p class="MsoNormal">HI Mary<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Sorry for the delay on this. <o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Centos 7 shows the same problem with GRIB2 files failing with OPeNDAP as we had earlier with Centos 6.
<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">fatal:_NclFileCreate: Requested file does not exist as (http://kyrill.ias.sdsmt.edu:8080/thredds/dodsC/BWW_GENS/2016/01/01/gens003_WRFRAP_ALL_2016-01-01_00.wrf_ci_turb.grib2) or as (http://kyrill.ias.sdsmt.edu:8080/thredds/dodsC/BWW_GENS/2016/01/01/gens003_WRFRAP_ALL_2016-01-01_00.wrf_ci_turb),
can't add file<o:p></o:p></p>
<p class="MsoNormal">fatal:file (f) isn't defined<o:p></o:p></p>
<p class="MsoNormal">fatal:["Execute.c":8640]:Execute: Error occurred at or near line 129 in file read_z500_ensembles_from_thredds.ncl<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">This code works on the Mac. Not sure if the Centos 6 modifications you made for 6.4.1-16May2017_1144 would be applicable to Centos 7.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Cheers and Thanks<br>
Bill<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal"><b><span style="font-size:12.0pt;color:black">From: </span></b><span style="font-size:12.0pt;color:black">Mary Haley <haley@ucar.edu><br>
<b>Date: </b>Wednesday, September 6, 2017 at 09:31 MDT<br>
<b>To: </b>William Capehart <William.Capehart@sdsmt.edu><br>
<b>Cc: </b>Kevin Tyle <ktyle@albany.edu>, "ncl-talk@ucar.edu" <ncl-talk@ucar.edu><br>
<b>Subject: </b>Re: [ncl-talk] Grib2 files on OpenDAP<o:p></o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal"><span style="font-size:12.0pt">Hi Bill,<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:12.0pt"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span style="font-size:12.0pt">I'm so sorry, it looks like we didn't follow-up on this one. I'm not aware of any issues specifically under CentOS7. Were you ever able to get this issue resolved?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:12.0pt"><o:p> </o:p></span></p>
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<p class="MsoNormal"><span style="font-size:12.0pt">--Mary<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:12.0pt"><o:p> </o:p></span></p>
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<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal">On Fri, Aug 11, 2017 at 1:31 PM, Capehart, William J <<a href="mailto:William.Capehart@sdsmt.edu" target="_blank">William.Capehart@sdsmt.edu</a>> wrote:<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Hi All.. Sorry to bring a dead horse back from the grave but is that GRIB reading problem also on Centos7? We’re doing upgrades here in our computer lab and we are getting hit
with that one.<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Cheers and Thanks<br>
Bill<o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">------------------------------------------------<br>
Bill Capehart <<a href="mailto:William.Capehart@sdsmt.edu" target="_blank"><span style="color:#0563C1">William.Capehart@sdsmt.edu</span></a>><br>
Atmospheric and Environmental Sciences Program Coordinator<br>
Civil and Environmental Engineering<br>
201 Mineral Industries Building<br>
South Dakota School of Mines and Technology<br>
501 East St Joseph Street<br>
Rapid City, SD 57701-3995<br>
Ph: <a href="tel:(605)%20394-1994" target="_blank">+1-605-394-1994</a> Mobile: <a href="tel:(605)%20484-5692" target="_blank">
+1-605-484-5692</a><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><b><span style="font-size:12.0pt;color:black">From:
</span></b><span style="font-size:12.0pt;color:black"><<a href="mailto:ncl-talk-bounces@ucar.edu" target="_blank">ncl-talk-bounces@ucar.edu</a>> on behalf of Mary Haley <<a href="mailto:haley@ucar.edu" target="_blank">haley@ucar.edu</a>><br>
<b>Date: </b>Tuesday, May 16, 2017 at 11:52 MDT<br>
<b>To: </b>Kevin Tyle <<a href="mailto:ktyle@albany.edu" target="_blank">ktyle@albany.edu</a>><br>
<b>Cc: </b>"<a href="mailto:ncl-talk@ucar.edu" target="_blank">ncl-talk@ucar.edu</a>" <<a href="mailto:ncl-talk@ucar.edu" target="_blank">ncl-talk@ucar.edu</a>></span><o:p></o:p></p>
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<p class="MsoNormal"><br>
<b>Subject: </b>Re: [ncl-talk] Grib2 files on OpenDAP<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">Hi Kevin,</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">Thanks for your patience.</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">I have a CentOS 6.9 binary (our Centos 6.8 system got upgraded) for you to try.</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">Same instructions as for "</span><span style="font-size:9.5pt">ncl_fix_sierra"</span><span style="font-size:12.0pt">, except now the file is called
"ncl_fix_centos69".</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">------</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">Note to other users: Kevin told me offline that he was able to get the MacOS Sierra binary to work by setting:</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><br>
DYLD_LIBRARY_PATH to /opt/local/lib/gcc5 <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">This was necessary because NCL was trying to load system libraries from /usr/local instead.</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt">--Mary</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:12.0pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">On Mon, May 15, 2017 at 11:50 AM, Tyle, Kevin R <<a href="mailto:ktyle@albany.edu" target="_blank">ktyle@albany.edu</a>> wrote:<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D">Hi Mary,</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D">Thanks for that; unfortunately I have not been able to run the Sierra binaries that your group has provided as I quickly get into DYLD_LIBRARY_PATH hell
when I run either the original 6.4.0 release or the update you provided below. The only Sierra version that loads without library errors is the one that I installed via MacPorts.</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D">If you do get a CentOS 6.8 build available, let me know!</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D">Thanks,</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D">Kevin</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto;background:white">
<span style="font-size:10.0pt;font-family:"Tahoma",sans-serif;color:black">_____________________________________________<br>
Kevin Tyle, Manager of Departmental Computing<br>
Dept. of Atmospheric & Environmental Sciences <br>
University at Albany<br>
Earth Science 235, 1400 Washington Avenue <br>
Albany, NY 12222<br>
Email: <a href="mailto:ktyle@albany.edu" target="_blank">ktyle@albany.edu</a><br>
Phone: <a href="tel:(518)%20442-4578" target="_blank">518-442-4578</a>
<br>
_____________________________________________</span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="color:#1F497D"> </span><o:p></o:p></p>
<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><b>From:</b> Mary Haley [mailto:<a href="mailto:haley@ucar.edu" target="_blank">haley@ucar.edu</a>]
<br>
<b>Sent:</b> Thursday, May 11, 2017 5:05 PM<br>
<b>To:</b> Tyle, Kevin R <<a href="mailto:ktyle@albany.edu" target="_blank">ktyle@albany.edu</a>><br>
<b>Cc:</b> <a href="mailto:ncl-talk@ucar.edu" target="_blank">ncl-talk@ucar.edu</a><br>
<b>Subject:</b> Re: [ncl-talk] Grib2 files on OpenDAP<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Kevin,<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">Sorry for the delay.<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">I can't get onto the CentOS 6.8 system at the moment, but I have a new Sierra "ncl" executable for you to try.<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">To get the test executable:<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span class="m-7050459487787737004m6352145747578419807gmail-m4237048552550387889gmail-il"><span style="font-size:9.5pt;background:white">wget</span></span><span style="font-size:9.5pt"> <span class="m-7050459487787737004m6352145747578419807gmail-m4237048552550387889gmail-il"><span style="background:white"><a href="ftp://ftp.ucar.edu:/pub/scd/haley/ncl_fix_sierra" target="_blank">ftp.ucar.edu:/pub/scd/haley/ncl_fix_sierra</a></span></span></span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt">Once you have the file, move it to $NCARG_ROOT/bin and make sure it is executable. You can call it whatever you like:</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> chmod gou+x ncl_fix_sierra</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> mv ncl_fix_sierra $NCARG_ROOT/bin/.</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt">Now you can use this new "ncl.fix" executable instead of the one already installed on your system:</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> ncl_fix_sierra your_script.ncl</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt">If you are comfortable that this executable works, you can replace your old ncl executable with this new one. You should first make a copy of your
old one:</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"> <o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> cd $NCARG_ROOT/bin</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> mv $NCARG_ROOT/bin/ncl $NCARG_ROOT/bin/ncl.old</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> mv $NCARG_ROOT/bin/ncl_fix_sierra $NCARG_ROOT/bin/ncl</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt"> </span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">It will have a weird version, because this is pre-alpha version:<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">6.4.1-11Mayk2017_1416<o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto"><span style="font-size:9.5pt">--Mary</span><o:p></o:p></p>
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<p class="MsoNormal" style="mso-margin-top-alt:auto;mso-margin-bottom-alt:auto">On Tue, May 9, 2017 at 7:18 PM, Tyle, Kevin R <<a href="mailto:ktyle@albany.edu" target="_blank">ktyle@albany.edu</a>> wrote:<o:p></o:p></p>
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<p><span style="font-family:"Tahoma",sans-serif;color:black">Hi,</span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black"> </span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black">I'm following up on a thread started a couple weeks ago regarding problems opening OpenDAP-served files ending in ".grib2" in NCL 6.4.0. I just started playing with 6.4.0 and quickly ran into this
issue. It was mentioned that the problem had been fixed in the development branch of NCL. Is there a link where I can grab compiled versions of this for CentOS 6.8 and Mac OSX Sierra?</span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black"> </span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black">Thanks,</span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black"> </span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black">Kevin</span><o:p></o:p></p>
<p><span style="font-family:"Tahoma",sans-serif;color:black"> </span><o:p></o:p></p>
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<span style="font-size:10.0pt;font-family:"Tahoma",sans-serif;color:black">_____________________________________________<br>
Kevin Tyle, Manager of Departmental Computing<br>
Dept. of Atmospheric & Environmental Sciences <br>
University at Albany<br>
Earth Science 235, 1400 Washington Avenue <br>
Albany, NY 12222<br>
Email: <a href="mailto:ktyle@albany.edu" target="_blank">ktyle@albany.edu</a><br>
Phone: <a href="tel:(518)%20442-4578" target="_blank">518-442-4578</a>
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_____________________________________________</span><o:p></o:p></p>
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