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<p>Thanks. I tried the following and only end up with a 2d grid of values like 2066, 18709, etc.</p>
<p>How can I retrieve slot [11-13] land/water flag with values like 000, 001, 010, etc?</p>
<p>Michael</p>
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<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">aa=addfile("h10v04_yellowstone/MOD13Q1.A2012001.h10v04.006.2015236172021.hdf.hdfeos","r")</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">lat2d=doubletofloat(aa->GridLat_MODIS_Grid_16DAY_250m_500m_VI(::-1,:))</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">lon2d=doubletofloat(aa->GridLon_MODIS_Grid_16DAY_250m_500m_VI(::-1,:))</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">lat2d!0="nlat"</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">lat2d!1="nlon"</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">lon2d!0="nlat"</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">lon2d!1="nlon"</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;">land=short2flt_hdf(aa->250m_16_days_VI_Quality_MODIS_Grid_16DAY_250m_500m_VI)</span></p>
<p style="margin: 0px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: normal; font-stretch: normal; font-size: 18px; line-height: normal; font-family: Menlo;">
<span style="font-variant-ligatures: no-common-ligatures;"></span></p>
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<span style="font-variant-ligatures: no-common-ligatures;">print(land)</span></p>
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Michael Notaro<br>
<div>Associate Director<br>
</div>
<div>Nelson Institute Center for Climatic Research<br>
</div>
<div>University of Wisconsin-Madison<br>
</div>
<div>Phone: (608) 261-1503<br>
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<div>Email: mnotaro@wisc.edu<br>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Marston Johnston <shejo284@gmail.com><br>
<b>Sent:</b> Tuesday, June 13, 2017 3:37 PM<br>
<b>To:</b> Michael Notaro; ncl-talk@ucar.edu<br>
<b>Subject:</b> Re: [ncl-talk] hdf confusion</font>
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<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-size:11.0pt; font-family:Calibri">Hi,</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-size:11.0pt; font-family:Calibri"> </span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-size:11.0pt; font-family:Calibri">Try this function: <a href="http://www.ncl.ucar.edu/Document/Functions/Contributed/short2flt_hdf.shtml" style="color: rgb(5, 99, 193); text-decoration: underline;" id="LPlnk689512" previewremoved="true">
http://www.ncl.ucar.edu/Document/Functions/Contributed/short2flt_hdf.shtml</a></span></p>
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NCL Home > Documentation > Functions > Type converters short2flt_hdf. Converts values of type short to values of type float using the "scale" and "offset" attributes ...</div>
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<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-size:11.0pt; font-family:Calibri"> </span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-size:11.0pt; font-family:Calibri">/M</span></p>
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<span style="font-size:11.0pt; font-family:Calibri"> </span></p>
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<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">~~~~~~~~~~~~~~~~~~~~~~~~~~~~~</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">Marston S. Johnston, PhD</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">Department of Earth Sciences</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">University of Gothenburg, Sweden</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">Email: <a href="mailto:marston.johnston@gu.se" style="color: rgb(5, 99, 193); text-decoration: underline;"><span style="color:#0070C0">marston.johnston@gu.se</span></a></span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">SkypeID: marston.johnston </span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">Phone: +46-31-7864901 </span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">Only the fruitful thing is true!</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="color:#0070C0">~~~~~~~~~~~~~~~~~~~~~~~~~~~~~</span></p>
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<span style="font-size:11.0pt; font-family:Calibri"> </span></p>
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<b><span style="font-family:Calibri; color:black">From: </span></b><span style="font-family:Calibri; color:black"><ncl-talk-bounces@ucar.edu> on behalf of Michael Notaro <mnotaro@wisc.edu><br>
<b>Date: </b>Tuesday, 13 June 2017 at 22:33<br>
<b>To: </b>"ncl-talk@ucar.edu" <ncl-talk@ucar.edu><br>
<b>Subject: </b>[ncl-talk] hdf confusion</span></p>
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<p><span style="font-family:Calibri; color:black">Sorry for the ignorant question but I am having trouble figuring out</span></p>
<p><span style="font-family:Calibri; color:black">how to properly retrieve the land-lake-ocean mask off this MODIS hdf file.</span></p>
<p><span style="font-family:Calibri; color:black">If I ncl_filedump *hdf, it shows the variable as ushort. If I ncl_filedump *hdf.hdfeos,</span></p>
<p><span style="font-family:Calibri; color:black">it shows the variable as short. Which should I use in addfile and how do I </span></p>
<p><span style="font-family:Calibri; color:black">retrieve the values of 001=land, 000=ocean, etc?</span></p>
<p><span style="font-family:Calibri; color:black">Michael</span></p>
<p><span style="font-family:Calibri; color:black"> </span></p>
<p><span style="font-family:Calibri; color:black"> </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">ncl_filedump h10v04_yellowstone/MOD13Q1.A2012001.h10v04.006.2015236172021.hdf.hdfeos</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> short 250m_16_days_VI_Quality_MODIS_Grid_16DAY_250m_500m_VI ( YDim_MODIS_Grid_16DAY_250m_500m_VI, XDim_MODIS_Grid_16DAY_250m_500m_VI )</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> coordinates :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">GridLat_MODIS_Grid_16DAY_250m_500m_VI, GridLon_MODIS_Grid_16DAY_250m_500m_VI</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> hdfeos_name :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">250m 16 days VI Quality</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> projection :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">Sinusoidal</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> unsigned :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">True</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> Legend :</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-family:Calibri; color:black"></span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">Bit Fields Description (Right to Left): </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[0-1] : MODLAND_QA [2 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">00: VI produced, good quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">01: VI produced, but check other QA </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">10: Pixel produced, but most probably cloudy </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">11: Pixel not produced due to other reasons than clouds </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[2-5] : VI usefulness [4 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0000: Highest quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0001: Lower quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0010..1010: Decreasing quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1100: Lowest quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1101: Quality so low that it is not useful </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1110: L1B data faulty </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1111: Not useful for any other reason/not processed </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[6-7] : Aerosol quantity [2 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">00: Climatology </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">01: Low </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">10: Average </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">11: High (11) </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[8] : Adjacent cloud detected; [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[9] : Atmosphere BRDF correction performed [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[10] : Mixed clouds [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[11-13] : Land/Water Flag [3 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">000: Shallow ocean </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">001: Land (Nothing else but land) </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">010: Ocean coastlines and lake shorelines </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">011: Shallow inland water </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">100: Ephemeral water </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">101: Deep inland water </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">110: Moderate or continental ocean </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">111: Deep ocean </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[14] : Possible snow/ice [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[15] : Possible shadow [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> _FillValue :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">-1</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> valid_range :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">( 0, -2 )</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> units :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">bit field</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> long_name :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">250m 16 days VI Quality</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-family:Calibri; color:black"> </span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">ncl_filedump h10v04_yellowstone/MOD13Q1.A2012001.h10v04.006.2015236172021.hdf</span><span style="font-family:Calibri; color:black"></span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black"><br>
<br>
</span><span style="font-family:Calibri; color:black"></span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black"> ushort 250m_16_days_VI_Quality ( YDim_MODIS_Grid_16DAY_250m_500m_VI, XDim_MODIS_Grid_16DAY_250m_500m_VI )</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> long_name :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">250m 16 days VI Quality</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> units :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">bit field</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> valid_range :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">( 0, 65534 )</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> _FillValue :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">65535</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> Legend :</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-family:Calibri; color:black"></span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">Bit Fields Description (Right to Left): </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[0-1] : MODLAND_QA [2 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">00: VI produced, good quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">01: VI produced, but check other QA </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">10: Pixel produced, but most probably cloudy </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">11: Pixel not produced due to other reasons than clouds </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[2-5] : VI usefulness [4 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0000: Highest quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0001: Lower quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0010..1010: Decreasing quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1100: Lowest quality </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1101: Quality so low that it is not useful </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1110: L1B data faulty </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1111: Not useful for any other reason/not processed </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[6-7] : Aerosol quantity [2 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">00: Climatology </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">01: Low </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">10: Average </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">11: High (11) </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[8] : Adjacent cloud detected; [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[9] : Atmosphere BRDF correction performed [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[10] : Mixed clouds [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[11-13] : Land/Water Flag [3 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">000: Shallow ocean </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">001: Land (Nothing else but land) </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">010: Ocean coastlines and lake shorelines </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">011: Shallow inland water </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">100: Ephemeral water </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">101: Deep inland water </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">110: Moderate or continental ocean </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">111: Deep ocean </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[14] : Possible snow/ice [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">[15] : Possible shadow [1 bit range] </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">1: Yes </span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black">0: No</span></p>
<p style=""><span style="font-size:13.5pt; font-family:Menlo; color:black"> hdf_name :</span></p>
<p><span style="font-size:13.5pt; font-family:Menlo; color:black">250m 16 days VI Quality</span></p>
<p style="margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-family:Calibri; color:black"> </span></p>
<p><span style="font-family:Calibri; color:black"> </span></p>
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<p style="background: white; margin: 0cm 0cm 0.0001pt; font-size: 12pt; font-family: "Times New Roman";">
<span style="font-family:Calibri; color:black">Michael Notaro</span></p>
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<span style="font-family:Calibri; color:black">Associate Director</span></p>
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<span style="font-family:Calibri; color:black">Nelson Institute Center for Climatic Research</span></p>
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<span style="font-family:Calibri; color:black">University of Wisconsin-Madison</span></p>
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<span style="font-family:Calibri; color:black">Phone: (608) 261-1503</span></p>
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<span style="font-family:Calibri; color:black">Email: mnotaro@wisc.edu</span></p>
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