<div dir="ltr">Thank you, I will try it and let you know. It is very unlikely that everything is significant</div><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Sep 1, 2015 at 12:21 PM, Adam Phillips <span dir="ltr"><<a href="mailto:asphilli@ucar.edu" target="_blank">asphilli@ucar.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div><div>Hi Ipshita,<br></div>Is it possible that all your grid points are significant using your definition of greater than 0.9? If that is the case NCL may not draw your stippling field depending on your NCL version. Try setting cnConstFEnableFill = True or you can try setting prob_djf(0,0) = 0.89.<br><br><a href="http://www.ncl.ucar.edu/Document/Graphics/Resources/cn.shtml#cnConstFEnableFill" target="_blank">http://www.ncl.ucar.edu/Document/Graphics/Resources/cn.shtml#cnConstFEnableFill</a><br><br></div>If that does not fix your issue or if you have any further questions please respond to the ncl-talk email list.<br></div>Adam<strong><br></strong><div><div><strong><br></strong></div></div></div><div class="gmail_extra"><br><div class="gmail_quote"><div><div class="h5">On Sat, Aug 29, 2015 at 11:06 PM, Ipshita Majhi <span dir="ltr"><<a href="mailto:ipmajhi@alaska.edu" target="_blank">ipmajhi@alaska.edu</a>></span> wrote:<br></div></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div><div class="h5"><div dir="ltr"><div><div><div><div>Dear NCL,<br> <br></div>I would like to calculate the significance. I am using the probability function, i am not sure where things are not working out. There are no error message, the code runs but no stippling show for significance.<br></div>Here is the code<br><br>;This is for correlating JJAS monthly precp with JJAS temperature with lag<br><br>;******************************************************<br>load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"<br>load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"<br>load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"<br>load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/shea_util.ncl"<br>;*******************************************************<br><br>;=============================================<br>; Reading data<br>;=============================================<br><br>a=addfile("~/Documents/SST/Monthly/<a href="http://sst.mnmean.v4.nc" target="_blank">sst.mnmean.v4.nc</a>","r")<br><br>;==============================================<br><br>JJAS_1871_2012 =asciiread("~/Documents/SST/Monthly/jjas_1871_2012.txt",(/142,1/),"float")<br>;Extracting JJAS for 1967 to 2012<br><br>JJAS_1967_2012=JJAS_1871_2012(96:141,0)<br>print(dimsizes(JJAS_1967_2012))<br><br>e=transpose(transpose(JJAS_1967_2012))<br>;print(dimsizes(e))<br><br>;=============================================<br><br>;For some months around september it is better to <br>;=============================================<br> ;The dataset goes from 1854-2015<br> sst=a->sst<br>; copy meta data and coordinate variables using contributed functions<br> copy_VarAtts(a,sst) <br> copy_VarCoords_1(a,sst)<br>;============================================<br><br>;Extracting 1967-2012 for SST<br>sst_1967_2012=sst(1367:1918,:,:)<br><br><br>copy_VarAtts(sst,sst_1967_2012) <br>copy_VarCoords_1(a,sst_1967_2012)<br><br>;============================================<br>;Seasonal three month average<br><br> <br> sst_djf=month_to_season(sst_1967_2012, "DJF")<br> sst_jfm=month_to_season(sst_1967_2012, "JFM")<br> sst_fma=month_to_season(sst_1967_2012, "FMA")<br> sst_mam=month_to_season(sst_1967_2012, "MAM")<br> sst_amj=month_to_season(sst_1967_2012, "AMJ")<br> sst_mjj=month_to_season(sst_1967_2012, "MJJ")<br> sst_jja=month_to_season(sst_1967_2012, "JJA")<br> sst_jas=month_to_season(sst_1967_2012, "JAS")<br> sst_aso=month_to_season(sst_1967_2012, "ASO")<br> sst_son=month_to_season(sst_1967_2012, "SON")<br> sst_ond=month_to_season(sst_1967_2012, "OND")<br> sst_ndj=month_to_season(sst_1967_2012, "NDJ")<br><br>;==============================================<br>;Copying Attributes and Coordinates<br><br>copy_VarAtts(sst_1967_2012,sst_djf) <br>copy_VarCoords_1(sst_1967_2012,sst_djf)<br><br>copy_VarAtts(sst_1967_2012,sst_jfm) <br>copy_VarCoords_1(sst_1967_2012,sst_jfm)<br><br>copy_VarAtts(sst_1967_2012,sst_fma) <br>copy_VarCoords_1(sst_1967_2012,sst_fma)<br><br>copy_VarAtts(sst_1967_2012,sst_mam) <br>copy_VarCoords_1(sst_1967_2012,sst_mam)<br><br>copy_VarAtts(sst_1967_2012,sst_amj) <br>copy_VarCoords_1(sst_1967_2012,sst_amj)<br><br>copy_VarAtts(sst_1967_2012,sst_mjj) <br>copy_VarCoords_1(sst_1967_2012,sst_mjj)<br><br>copy_VarAtts(sst_1967_2012,sst_jja) <br>copy_VarCoords_1(sst_1967_2012,sst_jja)<br><br>copy_VarAtts(sst_1967_2012,sst_jas) <br>copy_VarCoords_1(sst_1967_2012,sst_jas)<br><br>copy_VarAtts(sst_1967_2012,sst_aso) <br>copy_VarCoords_1(sst_1967_2012,sst_aso)<br><br>copy_VarAtts(sst_1967_2012,sst_son) <br>copy_VarCoords_1(sst_1967_2012,sst_son)<br><br>copy_VarAtts(sst_1967_2012,sst_ond) <br>copy_VarCoords_1(sst_1967_2012,sst_ond)<br><br>copy_VarAtts(sst_1967_2012,sst_ndj) <br>copy_VarCoords_1(sst_1967_2012,sst_ndj)<br><br>;=============================================<br><br>;Calculating correlation<br><br><br><br>djf_reorder=sst_djf(lat|:,lon|:,time|:)<br>jfm_reorder=sst_jfm(lat|:,lon|:,time|:)<br>fma_reorder=sst_fma(lat|:,lon|:,time|:)<br>mam_reorder=sst_mam(lat|:,lon|:,time|:)<br>amj_reorder=sst_amj(lat|:,lon|:,time|:)<br>mjj_reorder=sst_mjj(lat|:,lon|:,time|:)<br>jja_reorder=sst_jja(lat|:,lon|:,time|:)<br>jas_reorder=sst_jas(lat|:,lon|:,time|:)<br>aso_reorder=sst_aso(lat|:,lon|:,time|:)<br>son_reorder=sst_son(lat|:,lon|:,time|:)<br>ond_reorder=sst_ond(lat|:,lon|:,time|:)<br>ndj_reorder=sst_ndj(lat|:,lon|:,time|:)<br><br>;===================================================<br><br>copy_VarAtts(sst_djf,djf_reorder) <br>copy_VarCoords_1(sst_djf,djf_reorder)<br><br>copy_VarAtts(sst_jfm,jfm_reorder) <br>copy_VarCoords_1(sst_jfm,jfm_reorder)<br><br>copy_VarAtts(sst_fma,fma_reorder) <br>copy_VarCoords_1(sst_fma,fma_reorder)<br><br>copy_VarAtts(sst_mam,mam_reorder) <br>copy_VarCoords_1(sst_mam,mam_reorder)<br><br>copy_VarAtts(sst_amj,amj_reorder) <br>copy_VarCoords_1(sst_amj,amj_reorder)<br><br>copy_VarAtts(sst_mjj,mjj_reorder) <br>copy_VarCoords_1(sst_mjj,mjj_reorder)<br><br>copy_VarAtts(sst_jja,jja_reorder) <br>copy_VarCoords_1(sst_jja,jja_reorder)<br><br>copy_VarAtts(sst_jas,jas_reorder) <br>copy_VarCoords_1(sst_jas,jas_reorder)<br><br>copy_VarAtts(sst_aso,aso_reorder) <br>copy_VarCoords_1(sst_aso,aso_reorder)<br><br>copy_VarAtts(sst_son,son_reorder) <br>copy_VarCoords_1(sst_son,son_reorder)<br><br>copy_VarAtts(sst_ond,ond_reorder) <br>copy_VarCoords_1(sst_ond,ond_reorder)<br><br>copy_VarAtts(sst_ndj,ndj_reorder) <br>copy_VarCoords_1(sst_ndj,ndj_reorder)<br><br>;=======================================<br>;Calculating Correlation Coefficient<br><br>;Months with Lag<br>corr_djf=esccr(JJAS_1967_2012,djf_reorder,1)<br>corr_ndj=escorc(ndj_reorder(:,:,0:44),JJAS_1967_2012(1:45))<br>corr_ond=escorc(ond_reorder(:,:,0:44),JJAS_1967_2012(1:45))<br>corr_son=escorc(son_reorder(:,:,0:44),JJAS_1967_2012(1:45))<br>corr_aso=escorc(aso_reorder(:,:,0:44),JJAS_1967_2012(1:45))<br><br>copy_VarAtts(djf_reorder,corr_djf) <br>copy_VarCoords_1(djf_reorder,corr_djf)<br><br>copy_VarAtts(ndj_reorder,corr_ndj) <br>copy_VarCoords_1(ndj_reorder,corr_ndj)<br><br>copy_VarAtts(ond_reorder,corr_ond) <br>copy_VarCoords_1(ond_reorder,corr_ond)<br><br>copy_VarAtts(son_reorder,corr_son) <br>copy_VarCoords_1(son_reorder,corr_son)<br><br>copy_VarAtts(aso_reorder,corr_aso) <br>copy_VarCoords_1(aso_reorder,corr_aso)<br><br>;========================================<br>;Probability<br>x=corr_djf(:,:,1)<br>print(dimsizes(x))<br>;==============================<br>; Now plotting the correlation<br><br>;===========================================<br><br>; Now plotting the correlation<br><br><br> wks = gsn_open_wks("pdf","DJF_sst_jjas_cor_prob_sig_lag") <br> gsn_define_colormap(wks,"BlWhRe") ; choose colormap<br> <br> res = True ; make plot mods<br> res@gsnDraw = False<br> res@gsnFrame = False<br> res@cnFillOn = True ; turn on color<br> res@gsnSpreadColors = True ; use full colormap<br> res@lbLabelAutoStride = True ; automatic lb label stride<br><br> res@cnLinesOn = False ; turn off contour lines<br> res@cnLevelSelectionMode = "ManualLevels" ; manually set cnlev<br> res@cnMinLevelValF = -1. ; min level<br> res@cnMaxLevelValF = 1. ; max level<br> res@cnLevelSpacingF = .1 ; contour level spacing<br><br> lag = 0<br> res@tiMainString = "DJF SST with JJAS rainfall"<br> plotA = gsn_csm_contour_map_ce(wks,corr_djf,res)<br><br> ; Significance plot on top of correlation plot<br> ;========================= PLOT 2 =========<br> res2 = True ; res2 probability plots<br><br> res2@gsnDraw = False ; Do not draw plot<br> res2@gsnFrame = False ; Do not advance frome<br> res2@cnFillOn = True ; turn on color/pattern fill<br> res2@cnMonoFillPattern = False ; allow different patterns<br> res2@cnMonoFillColor = True ; only use one color (black)<br><br> res2@cnLevelSelectionMode = "ExplicitLevels" ; set explicit cnlev<br> res2@cnLevels = (/.90/) ; only have 1 contour level<br> res2@cnFillPatterns = (/-1,17/) ; don't fill <0.95, stipple >=0.95<br> <br> res2@gsnAddCyclic = True ; may or may not be needed<br> <br> res2@cnInfoLabelOn = False ; turn off info label<br><br> res2@cnLinesOn = False ; do not draw contour lines<br> res2@cnLineLabelsOn = False ; do not draw contour labels<br><br> res2@cnFillScaleF = 0.5 ; add extra density<br><br> printMinMax(prob_djf,0) ; check to make sure values are<br> ; between 0 and 1.<br><br> plot2 = gsn_csm_contour(wks,prob_djf, res2)<br> overlay (plotA, plot2)<br><br> draw (plotA)<br> frame(wks)<br><br></div>Best Regards<span><font color="#888888"><br></font></span></div><span><font color="#888888">Ipshita<br><div><div><div><div><div><br clear="all"><div><br><div><div dir="ltr"><br></div></div>
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<br></blockquote></div><span class="HOEnZb"><font color="#888888"><br><br clear="all"><br>-- <br><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div><div><span><font color="#888888">Adam Phillips <br></font></span></div><span><font color="#888888">Associate Scientist, </font></span><span><font color="#888888">Climate and Global Dynamics Laboratory, NCAR<br></font></span></div></div><div><span><font color="#888888"><a href="http://www.cgd.ucar.edu/staff/asphilli/" target="_blank">www.cgd.ucar.edu/staff/asphilli/</a> </font></span><span><font color="#888888"><a href="tel:303-497-1726" value="+13034971726" target="_blank">303-497-1726</a> </font></span></div><span><font color="#888888"></font></span><div><div><span><font color="#888888"><br></font></span><div><span><font color="#888888"><a href="http://www.cgd.ucar.edu/staff/asphilli" target="_blank"></a></font></span></div></div></div></div></div></div></div></div></div></div></div>
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</blockquote></div><br><br clear="all"><div><br></div>-- <br><div class="gmail_signature"><div dir="ltr"><div><div><div><div>Ipshita Majhi<br></div>PhD Candidate<br></div>University of Alaska , Fairbanks<br></div>Atmospheric Science Department<br></div>(907)978-4220 <a href="mailto:ipmajhi@alaska.edu" target="_blank">ipmajhi@alaska.edu</a><br></div></div>
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