<div dir="ltr"><div class="gmail_default" style="font-size:small">Also, as a test, you can try the bsub/NCL example mentioned here:</div><div class="gmail_default" style="font-size:small"><br></div><div class="gmail_default" style><a href="https://www2.cisl.ucar.edu/resources/geyser_caldera/visualization/ncl">https://www2.cisl.ucar.edu/resources/geyser_caldera/visualization/ncl</a><br></div><div class="gmail_default" style><br></div><div class="gmail_default" style>You will need to cut-and-paste the sample sample NCL script, which already has the full path to the sample data file. You can then create your own bsub script, using the sample bsub provided on that page.</div><div class="gmail_default" style><br></div><div class="gmail_default" style>Good luck,</div><div class="gmail_default" style><br></div><div class="gmail_default" style>--Mary</div><div class="gmail_default" style><br></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Mon, Apr 6, 2015 at 9:47 AM, Wei Huang <span dir="ltr"><<a href="mailto:huangwei@ucar.edu" target="_blank">huangwei@ucar.edu</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_default" style="font-family:verdana,sans-serif">Leslie,</div><div class="gmail_default" style="font-family:verdana,sans-serif"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif">It will be a good idea to try your job interactively first before you run a batch job.</div><div class="gmail_default" style="font-family:verdana,sans-serif">You may need to add "module load ncl" before you really run your ncl scripts.</div><div class="gmail_default" style="font-family:verdana,sans-serif"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif">Hope this help,</div><div class="gmail_default" style="font-family:verdana,sans-serif"><br></div><div class="gmail_default" style="font-family:verdana,sans-serif">Wei</div></div><div class="gmail_extra"><br clear="all"><div><div><div dir="ltr"><font face="tahoma, sans-serif">================================================</font><div><font face="tahoma, sans-serif">1850 Table Mesa Dr.</font></div><div><font face="tahoma, sans-serif">Boulder, CO 80307</font></div><div><font face="tahoma, sans-serif">Phone: <a href="tel:303-497-8924" value="+13034978924" target="_blank">303-497-8924</a></font></div></div></div></div><div><div class="h5">
<br><div class="gmail_quote">On Sun, Apr 5, 2015 at 8:12 PM, lzl <span dir="ltr"><<a href="mailto:lzl@gate.sinica.edu.tw" target="_blank">lzl@gate.sinica.edu.tw</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi<br>
I am trying to use "bsub" for dealing with the large data.<br>
However, I can't figure out what's the problem when it showed this error message. Here is how I used it:<br>
(1)<br>
bsub < batch_ncl_NewGW.csh<br>
<br>
--- the content in this batch_ncl_NewGW.csh file is below :<br>
#!/bin/bash<br>
<br>
#BSUB -Is # interactive job<br>
#BSUB -q geyser # queue<br>
#BSUB -P P93300042 # project code<br>
#BSUB -W 12:00 # wall-clock time (hrs:mins)<br>
#BSUB -n 1 # number of tasks in job<br>
#BSUB -J myjob # job name<br>
#BSUB -o myjob.%J.out # output file name in which %J is replaced by the job ID<br>
#BSUB -e myjob.%J.err # error file name in which %J is replaced by the job ID<br>
$SHELL<br>
#start the application<br>
ncl idlbatch_ncl > lognclpdf<br>
-------------------------------------------<br>
(2) then, the content in this idlbatch_ncl just has 2 lines:<br>
<br>
ncl btau_nudge_65wave.ncl<br>
<br>
exit<br>
<br>
(3)then the "btau_nudge_65wave.ncl" is my ncl program.<br>
<br>
(4) the error message is just one line:<br>
^[]0;tzuling@geyser10:NCLplot^G[tzuling@geyser10 NCLplot]$<br>
<br>
Please help me to deal with the large data in ncl.<br>
Thank you very much for your help.<br>
<br>
Best,<br>
Leslie<br>
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