<div dir="ltr">Hello,<div><br></div><div>I have removed the 3 export commands I had in my .bash_profile.<br></div><div>I restarted computer, typed in terminal 'conda activate ncl_stable' and then typed 'ncl'</div><div>NCL opened without a problem:</div><div>
<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures">Copyright (C) 1995-2019 - All Rights Reserved</span></p>
<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures"><span class="gmail-Apple-converted-space"> </span>University Corporation for Atmospheric Research</span></p>
<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures"><span class="gmail-Apple-converted-space"> </span>NCAR Command Language Version 6.6.2</span></p>
<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures"><span class="gmail-Apple-converted-space"> </span>The use of this software is governed by a License Agreement.</span></p>
<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures"><span class="gmail-Apple-converted-space"> </span>See <a href="http://www.ncl.ucar.edu/">http://www.ncl.ucar.edu/</a> for more details.</span></p>
<p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures">ncl 0><span class="gmail-Apple-converted-space"> </span></span></p><p class="gmail-p1" style="margin:0px;font-variant-numeric:normal;font-variant-east-asian:normal;font-stretch:normal;font-size:11px;line-height:normal;font-family:Menlo;color:rgb(0,0,0)"><span class="gmail-s1" style="font-variant-ligatures:no-common-ligatures"><span class="gmail-Apple-converted-space"><br></span></span></p></div><div>Also, I ran the 2nd and 3rd NCL test :</div><div>ncl $NCARG_ROOT/lib/ncarg/nclex/gsun/gsun02n.ncl</div><div>ncl $NCARG_ROOT/lib/ncarg/nclex/nug/NUG_multi_timeseries.ncl</div><div><br></div><div>and they both worked! Thanks so much for your help!</div><div>Vanessa</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Mon, Apr 20, 2020 at 8:40 AM Andrei Kurbatov via ncl-install <<a href="mailto:ncl-install@ucar.edu">ncl-install@ucar.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Hi Vanessa,<br>
<br>
1) Try to remove these 3 lines <br>
export NCARG_ROOT=/Users/Vanessa/miniconda3/envs/ncl_stable/bin/ncl<br>
<br>
export PATH=$NCARG_ROOT/bin:$PATH<br>
<br>
export DISPLAY=Vanessas-MacBook-Pro.local<br>
in <br>
.bash_profile <br>
2) restart the computer<br>
3) In terminal prompt type >conda activate ncl_stable<br>
4) In terminal prompt type >ncl<br>
<br>
Andrei<br>
<br>
P.S.<br>
All ncl specific settings should go to <br>
/Users/Vanessa/miniconda3/envs/ncl_stable/etc/conda/activate.d/ncl-activate.sh<br>
/Users/Vanessa/miniconda3/envs/ncl_stable/etc/conda/deactivate.d/ncl-deactivate.sh<br>
<br>
see some info here<br>
<a href="https://stackoverflow.com/questions/46826497/conda-set-ld-library-path-for-env-only" rel="noreferrer" target="_blank">https://stackoverflow.com/questions/46826497/conda-set-ld-library-path-for-env-only</a><br>
<br>
<br>
Andrei<br>
<br>
> On Apr 20, 2020, at 10:16 AM, <a href="mailto:ncl-install-request@ucar.edu" target="_blank">ncl-install-request@ucar.edu</a> wrote:<br>
> <br>
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> or, via email, send a message with subject or body 'help' to<br>
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> Today's Topics:<br>
> <br>
> 1. Re: NCL install issue (Vanessa Vincente)<br>
> <br>
> <br>
> ----------------------------------------------------------------------<br>
> <br>
> Message: 1<br>
> Date: Mon, 20 Apr 2020 08:16:26 -0600<br>
> From: Vanessa Vincente <<a href="mailto:vincente@ucar.edu" target="_blank">vincente@ucar.edu</a>><br>
> To: Dave Allured - NOAA Affiliate <<a href="mailto:dave.allured@noaa.gov" target="_blank">dave.allured@noaa.gov</a>><br>
> Cc: ncl-install <<a href="mailto:ncl-install@ucar.edu" target="_blank">ncl-install@ucar.edu</a>><br>
> Subject: Re: [ncl-install] NCL install issue<br>
> Message-ID:<br>
> <CAE742yjuRT3kzG_fqMwBcqapW05=PakqK1Mns5_B76z=<a href="mailto:VWqy7Q@mail.gmail.com" target="_blank">VWqy7Q@mail.gmail.com</a>><br>
> Content-Type: text/plain; charset="utf-8"<br>
> <br>
> Hello,<br>
> <br>
> I checked to see if XQuartz was installed on my laptop. I have XQuartz<br>
> 2.7.11 installed.<br>
> <br>
> I tried the NCL command and still get the same errors:<br>
> <br>
> Copyright (C) 1995-2019 - All Rights Reserved<br>
> <br>
> University Corporation for Atmospheric Research<br>
> <br>
> NCAR Command Language Version 6.6.2<br>
> <br>
> The use of this software is governed by a License Agreement.<br>
> <br>
> See <a href="http://www.ncl.ucar.edu/" rel="noreferrer" target="_blank">http://www.ncl.ucar.edu/</a> for more details.<br>
> <br>
> GKS ERROR NUMBER -208 ISSUED FROM SUBROUTINE GOPWK :<br>
> <br>
> --X driver error: DISPLAY environment variable not set<br>
> <br>
> GKS ERROR NUMBER 25 ISSUED FROM SUBROUTINE GESC :<br>
> <br>
> --SPECIFIED WORKSTATION IS NOT OPEN<br>
> <br>
> fatal:Workstation with PID#8 is not open<br>
> <br>
> fatal:Unable to open Workstation-Can't Create<br>
> <br>
> fatal:Unable to access object with id:-4<br>
> <br>
> fatal:_NhlCreate:Invalid Parent id #-4<br>
> <br>
> fatal:PID #-4 can't be found in NhlSetValues<br>
> <br>
> fatal:NhlDraw: Invalid Layer Id: -4<br>
> <br>
> fatal:Unable to update Workstation with PID#-4<br>
> <br>
> fatal:Unable to clear Workstation with PID#-4<br>
> <br>
> fatal:["Execute.c":8637]:Execute: Error occurred at or near line 2742 in<br>
> file $NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl<br>
> <br>
> <br>
> fatal:["Execute.c":8637]:Execute: Error occurred at or near line 10231 in<br>
> file $NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl<br>
> <br>
> <br>
> fatal:["Execute.c":8637]:Execute: Error occurred at or near line 20 in file<br>
> /Users/Vanessa/miniconda3/envs/ncl_stable/lib/ncarg/nclex/gsun/gsun02n.ncl<br>
> <br>
> <br>
> <br>
> I tried the help page for setting the Display environment.<br>
> Below is a copy of my .bash_profile I edited:<br>
> <br>
> <br>
> <br>
> # >>> conda initialize >>><br>
> <br>
> # !! Contents within this block are managed by 'conda init' !!<br>
> <br>
> __conda_setup="$('/Users/Vanessa/miniconda3/bin/conda' 'shell.bash' 'hook'<br>
> 2> /dev/null)"<br>
> <br>
> if [ $? -eq 0 ]; then<br>
> <br>
> eval "$__conda_setup"<br>
> <br>
> else<br>
> <br>
> if [ -f "/Users/Vanessa/miniconda3/etc/profile.d/conda.sh" ]; then<br>
> <br>
> . "/Users/Vanessa/miniconda3/etc/profile.d/conda.sh"<br>
> <br>
> else<br>
> <br>
> export PATH="/Users/Vanessa/miniconda3/bin:$PATH"<br>
> <br>
> fi<br>
> <br>
> fi<br>
> <br>
> unset __conda_setup<br>
> <br>
> # <<< conda initialize <<<<br>
> <br>
> <br>
> # Settings for NCL<br>
> <br>
> export NCARG_ROOT=/Users/Vanessa/miniconda3/envs/ncl_stable/bin/ncl<br>
> <br>
> export PATH=$NCARG_ROOT/bin:$PATH<br>
> <br>
> export DISPLAY=Vanessas-MacBook-Pro.local<br>
> <br>
> ~<br>
> <br>
> Is there another step I can try to resolve the issue?<br>
> <br>
> Thanks!<br>
> Vanessa<br>
> <br>
> <br>
> On Sun, Apr 19, 2020 at 10:45 PM Dave Allured - NOAA Affiliate <<br>
> <a href="mailto:dave.allured@noaa.gov" target="_blank">dave.allured@noaa.gov</a>> wrote:<br>
> <br>
>> I think that you may not have installed XQuartz properly. Please follow<br>
>> the instructions under "Install XQuartz" on this page:<br>
>> <br>
>> <a href="http://www.ncl.ucar.edu/Download/macosx.shtml" rel="noreferrer" target="_blank">http://www.ncl.ucar.edu/Download/macosx.shtml</a><br>
>> <br>
>> Make sure that after downloading the Xquartz.dmg file, you double click on<br>
>> this file and complete the installation procedure. You may also need to<br>
>> restart your Mac after the install procedure. Then retry the ncl test<br>
>> command.<br>
>> <br>
>> <br>
>> On Sun, Apr 19, 2020 at 9:02 PM Vanessa Vincente via ncl-install <<br>
>> <a href="mailto:ncl-install@ucar.edu" target="_blank">ncl-install@ucar.edu</a>> wrote:<br>
>> <br>
>>> Hello,<br>
>>> <br>
>>> I am trying to install NCL on my macOS High Sierra laptop and I am having<br>
>>> issues with testing NCL.<br>
>>> <br>
>>> I have installed miniconda:<br>
>>> conda -V returns "conda 4.8.3"<br>
>>> <br>
>>> I have created the conda environment and called it "ncl_stable"<br>
>>> <br>
>>> I am testing NCL, step 1:<br>
>>> ncl -V returns "6.6.2"<br>
>>> <br>
>>> The issue I have is in step 2:<br>
>>> ncl $NCARG_ROOT/lib/ncarg/nclex/gsun/gsun02n.ncl<br>
>>> <br>
>>> this returns...<br>
>>> <br>
>>> Copyright (C) 1995-2019 - All Rights Reserved<br>
>>> <br>
>>> University Corporation for Atmospheric Research<br>
>>> <br>
>>> NCAR Command Language Version 6.6.2<br>
>>> <br>
>>> The use of this software is governed by a License Agreement.<br>
>>> <br>
>>> See <a href="http://www.ncl.ucar.edu/" rel="noreferrer" target="_blank">http://www.ncl.ucar.edu/</a> for more details.<br>
>>> <br>
>>> GKS ERROR NUMBER -208 ISSUED FROM SUBROUTINE GOPWK :<br>
>>> <br>
>>> --X driver error: DISPLAY environment variable not set<br>
>>> <br>
>>> GKS ERROR NUMBER 25 ISSUED FROM SUBROUTINE GESC :<br>
>>> <br>
>>> --SPECIFIED WORKSTATION IS NOT OPEN<br>
>>> <br>
>>> fatal:Workstation with PID#8 is not open<br>
>>> <br>
>>> fatal:Unable to open Workstation-Can't Create<br>
>>> <br>
>>> fatal:Unable to access object with id:-4<br>
>>> <br>
>>> fatal:_NhlCreate:Invalid Parent id #-4<br>
>>> <br>
>>> fatal:PID #-4 can't be found in NhlSetValues<br>
>>> <br>
>>> fatal:NhlDraw: Invalid Layer Id: -4<br>
>>> <br>
>>> fatal:Unable to update Workstation with PID#-4<br>
>>> <br>
>>> fatal:Unable to clear Workstation with PID#-4<br>
>>> <br>
>>> fatal:["Execute.c":8637]:Execute: Error occurred at or near line 2742 in<br>
>>> file $NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl<br>
>>> <br>
>>> <br>
>>> fatal:["Execute.c":8637]:Execute: Error occurred at or near line 10231 in<br>
>>> file $NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl<br>
>>> <br>
>>> <br>
>>> fatal:["Execute.c":8637]:Execute: Error occurred at or near line 20 in<br>
>>> file<br>
>>> /Users/Vanessa/miniconda3/envs/ncl_stable/lib/ncarg/nclex/gsun/gsun02n.ncl<br>
>>> <br>
>>> <br>
>>> Below is the output requested from help page:<br>
>>> <br>
>>> (ncl_stable) Vanessas-MacBook-Pro:~ Vanessa$ conda list -n ncl_stable<br>
>>> <br>
>>> # packages in environment at /Users/Vanessa/miniconda3/envs/ncl_stable:<br>
>>> <br>
>>> #<br>
>>> <br>
>>> # Name Version Build Channel<br>
>>> <br>
>>> boost-cpp 1.72.0 hdf9ef73_0 conda-forge<br>
>>> <br>
>>> bzip2 1.0.8 h0b31af3_2 conda-forge<br>
>>> <br>
>>> ca-certificates 2020.4.5.1 hecc5488_0 conda-forge<br>
>>> <br>
>>> cairo 1.16.0 hec6a9b0_1003 conda-forge<br>
>>> <br>
>>> certifi 2020.4.5.1 py38h32f6830_0 conda-forge<br>
>>> <br>
>>> cfitsio 3.470 h84d2f63_2 conda-forge<br>
>>> <br>
>>> curl 7.69.1 h2d98d24_0 conda-forge<br>
>>> <br>
>>> esmf 8.0.0 nompi_hee103b1_6 conda-forge<br>
>>> <br>
>>> expat 2.2.9 h4a8c4bd_2 conda-forge<br>
>>> <br>
>>> fontconfig 2.13.1 h6b1039f_1001 conda-forge<br>
>>> <br>
>>> freetype 2.10.1 h8da9a1a_0 conda-forge<br>
>>> <br>
>>> freexl 1.0.5 h1de35cc_1002 conda-forge<br>
>>> <br>
>>> geos 3.8.1 h4a8c4bd_0 conda-forge<br>
>>> <br>
>>> geotiff 1.5.1 hd8796ba_10 conda-forge<br>
>>> <br>
>>> gettext 0.19.8.1 h46ab8bc_1002 conda-forge<br>
>>> <br>
>>> giflib 5.2.1 h0b31af3_2 conda-forge<br>
>>> <br>
>>> glib 2.64.2 h577aef8_0 conda-forge<br>
>>> <br>
>>> gsl 2.6 ha2d443c_0 conda-forge<br>
>>> <br>
>>> hdf4 4.2.13 h84186c3_1003 conda-forge<br>
>>> <br>
>>> hdf5 1.10.5 nompi_h3e39495_1104<br>
>>> conda-forge<br>
>>> <br>
>>> hdfeos2 2.20 h207910d_1000 conda-forge<br>
>>> <br>
>>> hdfeos5 5.1.16 h60f75e3_5 conda-forge<br>
>>> <br>
>>> icu 64.2 h6de7cb9_1 conda-forge<br>
>>> <br>
>>> jasper 1.900.1 h636a363_1006 conda-forge<br>
>>> <br>
>>> jpeg 9c h1de35cc_1001 conda-forge<br>
>>> <br>
>>> json-c 0.13.1 h1de35cc_1001 conda-forge<br>
>>> <br>
>>> kealib 1.4.13 h2324030_0 conda-forge<br>
>>> <br>
>>> krb5 1.17.1 h1752a42_0 conda-forge<br>
>>> <br>
>>> libblas 3.8.0 14_openblas conda-forge<br>
>>> <br>
>>> libcblas 3.8.0 14_openblas conda-forge<br>
>>> <br>
>>> libcurl 7.69.1 hc0b9707_0 conda-forge<br>
>>> <br>
>>> libcxx 10.0.0 0 conda-forge<br>
>>> <br>
>>> libdap4 3.20.4 habf5908_0 conda-forge<br>
>>> <br>
>>> libedit 3.1.20170329 hcfe32e1_1001 conda-forge<br>
>>> <br>
>>> libffi 3.2.1 h4a8c4bd_1007 conda-forge<br>
>>> <br>
>>> libgdal 3.0.4 ha92c1e4_6 conda-forge<br>
>>> <br>
>>> libgfortran 4.0.0 2 conda-forge<br>
>>> <br>
>>> libiconv 1.15 h0b31af3_1006 conda-forge<br>
>>> <br>
>>> libkml 1.3.0 h169b8f9_1011 conda-forge<br>
>>> <br>
>>> libnetcdf 4.7.4 nompi_he461dc0_101<br>
>>> conda-forge<br>
>>> <br>
>>> libopenblas 0.3.7 h3d69b6c_4 conda-forge<br>
>>> <br>
>>> libpng 1.6.37 hbbe82c9_1 conda-forge<br>
>>> <br>
>>> libpq 12.2 h489d428_1 conda-forge<br>
>>> <br>
>>> libspatialite 4.3.0a h658e6c1_1038 conda-forge<br>
>>> <br>
>>> libssh2 1.8.2 hcdc9a53_2 conda-forge<br>
>>> <br>
>>> libtiff 4.1.0 h2ae36a8_6 conda-forge<br>
>>> <br>
>>> libwebp-base 1.1.0 h0b31af3_3 conda-forge<br>
>>> <br>
>>> libxml2 2.9.10 h53d96d6_0 conda-forge<br>
>>> <br>
>>> llvm-openmp 8.0.1 h770b8ee_0 conda-forge<br>
>>> <br>
>>> lz4-c 1.9.2 h4a8c4bd_0 conda-forge<br>
>>> <br>
>>> ncl 6.6.2 h0197cca_20 conda-forge<br>
>>> <br>
>>> ncurses 6.1 h0a44026_1002 conda-forge<br>
>>> <br>
>>> netcdf-fortran 4.5.2 nompi_h0361502_104<br>
>>> conda-forge<br>
>>> <br>
>>> openjpeg 2.3.1 h254dc36_3 conda-forge<br>
>>> <br>
>>> openmp 8.0.1 0 conda-forge<br>
>>> <br>
>>> openssl 1.1.1f h0b31af3_0 conda-forge<br>
>>> <br>
>>> pcre 8.44 h4a8c4bd_0 conda-forge<br>
>>> <br>
>>> pip 20.0.2 py_2 conda-forge<br>
>>> <br>
>>> pixman 0.38.0 h01d97ff_1003 conda-forge<br>
>>> <br>
>>> poppler 0.67.0 h16886b5_8 conda-forge<br>
>>> <br>
>>> poppler-data 0.4.9 1 conda-forge<br>
>>> <br>
>>> postgresql 12.2 h62ab893_1 conda-forge<br>
>>> <br>
>>> proj 7.0.0 hbce2d5c_3 conda-forge<br>
>>> <br>
>>> python 3.8.2 hd5f0129_6_cpython<br>
>>> conda-forge<br>
>>> <br>
>>> python_abi 3.8 1_cp38 conda-forge<br>
>>> <br>
>>> readline 8.0 hcfe32e1_0 conda-forge<br>
>>> <br>
>>> setuptools 46.1.3 py38h32f6830_0 conda-forge<br>
>>> <br>
>>> sqlite 3.30.1 h93121df_0 conda-forge<br>
>>> <br>
>>> tbb 2018.0.5 h2d50403_0 conda-forge<br>
>>> <br>
>>> tiledb 1.7.7 h84aa2a7_1 conda-forge<br>
>>> <br>
>>> tk 8.6.10 hbbe82c9_0 conda-forge<br>
>>> <br>
>>> tzcode 2019a h01d97ff_1002 conda-forge<br>
>>> <br>
>>> udunits2 2.2.27.6 h776b7f1_1001 conda-forge<br>
>>> <br>
>>> wheel 0.34.2 py_1 conda-forge<br>
>>> <br>
>>> xerces-c 3.2.2 h8f8adb3_1004 conda-forge<br>
>>> <br>
>>> xz 5.2.5 h0b31af3_0 conda-forge<br>
>>> <br>
>>> zlib 1.2.11 h0b31af3_1006 conda-forge<br>
>>> <br>
>>> zstd 1.4.4 h4b3e974_3 conda-forge<br>
>>> <br>
>>> (ncl_stable) Vanessas-MacBook-Pro:~ Vanessa$ conda --version<br>
>>> <br>
>>> conda 4.8.3<br>
>>> <br>
>>> (ncl_stable) Vanessas-MacBook-Pro:~ Vanessa$ which ncl<br>
>>> <br>
>>> /Users/Vanessa/miniconda3/envs/ncl_stable/bin/ncl<br>
>>> <br>
>>> (ncl_stable) Vanessas-MacBook-Pro:~ Vanessa$ ncl -V<br>
>>> <br>
>>> 6.6.2<br>
>>> <br>
>>> (ncl_stable) Vanessas-MacBook-Pro:~ Vanessa$ env | grep NCARG<br>
>>> <br>
>>> OLD_NCARG_ROOT=/Users/Vanessa/miniconda3/envs/ncl_stable/bin/ncl<br>
>>> <br>
>>> NCARG_ROOT=/Users/Vanessa/miniconda3/envs/ncl_stable<br>
>>> <br>
>>> Can you please help me with running the tests for NCL and getting it to<br>
>>> work properly?<br>
>>> <br>
>>> Many thanks in advance for your help,<br>
>>> Vanessa<br>
>>> <br>
>>> <br>
>>> --<br>
>>> Vanessa Vincente<br>
>>> Associate Scientist<br>
>>> The COMET? Program<br>
>>> University Corporation for Atmospheric Research<br>
>>> <br>
>>> *My working hours may differ from your own. Please do not feel obligated<br>
>>> to reply outside of standard business hours.*<br>
>>> _______________________________________________<br>
>>> ncl-install mailing list<br>
>>> List instructions, subscriber options, unsubscribe:<br>
>>> <a href="http://mailman.ucar.edu/mailman/listinfo/ncl-install" rel="noreferrer" target="_blank">http://mailman.ucar.edu/mailman/listinfo/ncl-install</a><br>
>> <br>
>> <br>
> <br>
> -- <br>
> Vanessa Vincente<br>
> Associate Scientist<br>
> The COMET? Program<br>
> University Corporation for Atmospheric Research<br>
> <br>
> *My working hours may differ from your own. Please do not feel obligated<br>
> to reply outside of standard business hours.*<br>
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</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><font color="#000000">Vanessa Vincente<br>Associate Scientist<br>The COMET® Program<br>University Corporation for Atmospheric Research<br></font><br>*My working hours may differ from your own. Please do not feel obligated to reply outside of standard business hours.*<div dir="ltr"></div></div></div></div></div></div></div></div></div></div>