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<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif"">Hi, <span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif"">I am trying to use <span class="gmail-il">ncl</span> to convert some of downloaded MODIS
hdf file to nc. Please see the error message below. <span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif"">The same error when I type ncl_filedump or ncl_convert2nc<span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif"">
<span style="font-size:11pt;font-family:"Calibri","sans-serif""><img style="margin-right: 0px;" width="0" height="0"><i>>ncl_convert2nc MCD12Q1.A2012001.h18v01.006.2018055002712.hdf <br>Processing file: MCD12Q1.A2012001.h18v01.006.2018055002712.hdf...<br>Segmentation fault (core dumped)</i><br></span>
<br><span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif"">I used conda installed <span class="gmail-il">ncl</span>, and had no problem when running
these test command after installation. <span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span style="font-size:10pt;font-family:"Courier New"">><span class="gmail-il">ncl</span>
$NCARG_ROOT/lib/ncarg/nclex/gsun/gsun02n.<span class="gmail-il">ncl</span><span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span style="font-size:10pt;font-family:"Courier New"">><span class="gmail-il">ncl</span>
$NCARG_ROOT/lib/ncarg/nclex/nug/NUG_multi_timeseries.<span class="gmail-il">ncl</span><span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span style="font-size:10pt;font-family:"Courier New""><span> </span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span style="font-size:10pt;font-family:"Courier New""><span> </span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span style="font-size:10pt;font-family:"Courier New"">Here
are the required information: <span></span></span></p>
<pre style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Courier New""><br></pre><pre style="margin:0cm 0cm 0.0001pt;font-size:10pt;font-family:"Courier New"">>conda list -n <i>ncl_stable</i><span></span></pre>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span style="font-size:10pt;font-family:"Courier New""><span> # packages in environment at /home/jing/miniconda2/envs/ncl_stable:<br>#<br># Name Version Build Channel<br>boost-cpp 1.68.0 h11c811c_1000 conda-forge<br>bzip2 1.0.6 h14c3975_1002 conda-forge<br>ca-certificates 2019.3.9 hecc5488_0 conda-forge<br>cairo 1.16.0 ha4e643d_1000 conda-forge<br>certifi 2019.3.9 py37_0 conda-forge<br>cfitsio 3.430 h0bd2449_1002 conda-forge<br>cftime 1.0.3.4 py37hd352d35_1001 conda-forge<br>curl 7.64.1 hf8cf82a_0 conda-forge<br>esmf 7.1.0 hdfb41a0_1004 conda-forge<br>expat 2.2.5 hf484d3e_1002 conda-forge<br>fontconfig 2.13.1 he4413a7_1000 conda-forge<br>freetype 2.10.0 he983fc9_0 conda-forge<br>freexl 1.0.5 h14c3975_1002 conda-forge<br>geos 3.7.1 hf484d3e_1000 conda-forge<br>geotiff 1.5.1 h560c3f3_2 conda-forge<br>gettext 0.19.8.1 hc5be6a0_1002 conda-forge<br>giflib 5.1.7 h516909a_1 conda-forge<br>glib 2.58.3 hf63aee3_1001 conda-forge<br>gsl 2.4 h294904e_1006 conda-forge<br>hdf4 4.2.13 h9a582f1_1002 conda-forge<br>hdf5 1.10.4 nompi_h3c11f04_1106 conda-forge<br>hdfeos2 2.20 h64bfcee_1000 conda-forge<br>hdfeos5 5.1.16 hccfc538_4 conda-forge<br>icu 58.2 hf484d3e_1000 conda-forge<br>jasper 1.900.1 h07fcdf6_1006 conda-forge<br>jpeg 9c h14c3975_1001 conda-forge<br>json-c 0.13.1 h14c3975_1001 conda-forge<br>kealib 1.4.10 h1978553_1003 conda-forge<br>krb5 1.16.3 h05b26f9_1001 conda-forge<br>libblas 3.8.0 10_openblas conda-forge<br>libcblas 3.8.0 10_openblas conda-forge<br>libcurl 7.64.1 hda55be3_0 conda-forge<br>libdap4 3.19.1 hd48c02d_1000 conda-forge<br>libedit 3.1.20170329 hf8c457e_1001 conda-forge<br>libffi 3.2.1 he1b5a44_1006 conda-forge<br>libgcc-ng 8.2.0 hdf63c60_1 <br>libgdal 2.4.1 h02bbc0b_3 conda-forge<br>libgfortran-ng 7.3.0 hdf63c60_0 <br>libiconv 1.15 h516909a_1005 conda-forge<br>libkml 1.3.0 h328b03d_1009 conda-forge<br>liblapack 3.8.0 10_openblas conda-forge<br>libnetcdf 4.6.2 hbdf4f91_1001 conda-forge<br>libpng 1.6.37 hed695b0_0 conda-forge<br>libpq 11.3 h4e4e079_0 conda-forge<br>libspatialite 4.3.0a h4c5cd43_1028 conda-forge<br>libssh2 1.8.2 h22169c7_2 conda-forge<br>libstdcxx-ng 8.2.0 hdf63c60_1 <br>libtiff 4.0.10 h648cc4a_1001 conda-forge<br>libuuid 2.32.1 h14c3975_1000 conda-forge<br>libxcb 1.13 h14c3975_1002 conda-forge<br>libxml2 2.9.9 h13577e0_0 conda-forge<br>lz4-c 1.8.3 he1b5a44_1001 conda-forge<br>mpi 1.0 mpich conda-forge<br>mpich 3.2.1 hc99cbb1_1009 conda-forge<br><span class="gmail-il">ncl</span> 6.6.2 h3a5803f_3 conda-forge<br>nco 4.8.0 hfb3d286_0 conda-forge<br>ncurses 6.1 hf484d3e_1002 conda-forge<br>netcdf-fortran 4.4.5 hea25ff8_1000 conda-forge<br>netcdf4 1.5.1.2 py37had58050_0 conda-forge<br>numpy 1.16.4 py37h95a1406_0 conda-forge<br>openblas 0.3.6 h6e990d7_2 conda-forge<br>openjpeg 2.3.1 h58a6597_0 conda-forge<br>openssl 1.1.1b h14c3975_1 conda-forge<br>pcre 8.41 hf484d3e_1003 conda-forge<br>pip 19.1 py37_0 conda-forge<br>pixman 0.34.0 h14c3975_1003 conda-forge<br>poppler 0.67.0 h2ad7f00_6 conda-forge<br>poppler-data 0.4.9 1 conda-forge<br>postgresql 11.3 hbeee2d4_0 conda-forge<br>proj4 6.1.0 he751ad9_2 conda-forge<br>pthread-stubs 0.4 h14c3975_1001 conda-forge<br>python 3.7.3 h5b0a415_0 conda-forge<br>readline 7.0 hf8c457e_1001 conda-forge<br>setuptools 41.0.1 py37_0 conda-forge<br>sqlite 3.28.0 h8b20d00_0 conda-forge<br>tempest-remap 2.0.3 h5f743cb_0 conda-forge<br>tk 8.6.9 h84994c4_1001 conda-forge<br>tzcode 2019a h516909a_1002 conda-forge<br>udunits2 2.2.27.6 h4e0c4b3_1001 conda-forge<br>wheel 0.33.4 py37_0 conda-forge<br>xerces-c 3.2.2 hac72e42_1001 conda-forge<br>xorg-imake 1.0.7 0 conda-forge<br>xorg-kbproto 1.0.7 h14c3975_1002 conda-forge<br>xorg-libice 1.0.9 h516909a_1004 conda-forge<br>xorg-libsm 1.2.3 h84519dc_1000 conda-forge<br>xorg-libx11 1.6.7 h14c3975_1000 conda-forge<br>xorg-libxau 1.0.9 h14c3975_0 conda-forge<br>xorg-libxaw 1.0.13 h14c3975_1002 conda-forge<br>xorg-libxdmcp 1.1.3 h516909a_0 conda-forge<br>xorg-libxext 1.3.4 h516909a_0 conda-forge<br>xorg-libxmu 1.1.3 h516909a_0 conda-forge<br>xorg-libxpm 3.5.12 h14c3975_1002 conda-forge<br>xorg-libxrender 0.9.10 h516909a_1002 conda-forge<br>xorg-libxt 1.1.5 h14c3975_1002 conda-forge<br>xorg-makedepend 1.0.6 he1b5a44_1 conda-forge<br>xorg-renderproto 0.11.1 h14c3975_1002 conda-forge<br>xorg-xextproto 7.3.0 h14c3975_1002 conda-forge<br>xorg-xproto 7.0.31 h14c3975_1007 conda-forge<br>xz 5.2.4 h14c3975_1001 conda-forge<br>zlib 1.2.11 h14c3975_1004 conda-forge<br>zstd 1.4.0 h3b9ef0a_0 conda-forge<br></span></span></p>>conda --version<br><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif"">conda 4.6.14<br>><span class="gmail-il">ncl</span> -V<br>6.6.2</p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><br></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""> >which <span class="gmail-il">ncl</span><br>/home/jing/miniconda2/envs/ncl_stable/bin/<span class="gmail-il">ncl</span><br><span style="font-size:10pt;font-family:"Courier New""><span></span></span></p>
<p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span> >env | grep NCARG<br>OLD_NCARG_ROOT=/home/jing/miniconda2/envs/ncl_stable:<br>NCARG_ROOT=/home/jing/miniconda2/envs/ncl_stable<br></span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span><br></span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span>Looking forward to your suggestions!</span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span><br></span></p><p class="MsoNormal" style="margin:0cm 0cm 0.0001pt;font-size:11pt;font-family:"Calibri","sans-serif""><span>Best regards, Jing</span></p>
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