<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hello Mary, Hello Johnson,<div class=""><br class=""></div><div class="">I had the same problem as Johnson, this is how I got around it on Mac OS X High Sierra with GNU v7.2.0.</div><div class=""><br class=""></div><div class="">I realised from Mary’s earlier post that gsl version was an issue so I decided to force the ncl installation with the gsl package version 2.2.1 and also on the error you are getting, it seems gdal version installed by default is not compatible the libkea default. </div><div class=""><br class=""></div><div class="">conda create -n ncl_stable -c conda-forge ncl=6.4.0 gsl=2.2.1 libgdal=2.2.2</div><div class=""><br class=""></div><div class="">Everything works fine now after testing the installation with;</div><div class=""><br class=""></div><div class="">ng4ex xy05n -clean -W png</div><div class=""><br class=""></div><div class="">Hope it helps!</div><div class="">Cheers!</div><div class=""><br class=""></div><div class="">Kwesi</div><div class=""><div apple-content-edited="true" class="">
<div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class=""><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">--------<br class="">Try not to become a man of success but rather a man of value-Albert Einstein<br class=""><br class="">Kwesi A. Quagraine<br class="">Department of Physics, <br class="">School of Physical Sciences, <br class="">College of Agriculture and Natural Sciences<br class="">University of Cape Coast<br class="">Cape Coast, Ghana<br class=""><br class="">Alt. Email: <a href="mailto:kwesi@csag.uct.ac.za" class="">kwesi@csag.uct.ac.za</a> <br class="">Web: <a href="http://www.recycleupghana.org/" class="">http://www.recycleupghana.org/</a><br class="">office: +27 21 650 3164<br class="">skype: quagraine_cwasi<br class=""><br class=""></div></div></div></div></div>
</div>
<br class=""><div><blockquote type="cite" class=""><div class="">On 02 Nov 2017, at 8:49 PM, Mary Haley <<a href="mailto:haley@ucar.edu" class="">haley@ucar.edu</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class=""><div class="gmail_default" style="font-size:small">Hi Henry,</div><div class="gmail_default" style="font-size:small"><br class=""></div><div class="gmail_default" style="font-size:small">Sorry for the delay in response. We are having issues with the conda-forge release of NCL. The administrators changed some of the packages that NCL depends on, and now they are broken. </div><div class="gmail_default" style="font-size:small"><br class=""></div><div class="gmail_default" style="font-size:small">For now, we are going to recommend that people NOT use conda to install NCL, but rather the ESG binaries.</div><div class="gmail_default" style="font-size:small"><br class=""></div><div class="gmail_default" style="font-size:small">As for the ESG version of NCL, if you google this error message:</div><br class="">Internal Error: get_unit(): Bad internal unit KIND<br class=""><br class="">You will see some threads that refer to GNU V7.1 being the issue, which is the version you have installed. We built NCL with V6.<div class="gmail_default" style="font-size:small;display:inline">1</div>.0 and V5.4.0, so would you be able to install GNU<div class="gmail_default" style="font-size:small;display:inline"> V6.x and try this instead?</div><br class=""><br class="">Thanks,<div class=""><br class=""><div class="gmail_default" style="font-size:small">--Mary</div><div class="gmail_default" style="font-size:small"><br class=""></div></div></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Wed, Nov 1, 2017 at 9:03 AM, Johnson, Henry <span dir="ltr" class=""><<a href="mailto:henry_johnson@brown.edu" target="_blank" class="">henry_johnson@brown.edu</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr" class=""><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">Hi,</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">I provide support for our group, and we have seem to have a problem with getting NCL running on either OS X 10.12 or 10.13 (Sierra and High Sierra)</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">Using "conda" I can get a functional NCL 6.3.0 install working. However, the present conda images (or whatever you call them, environments?) for 6.4.0 have a whole slew of unmet dependencies. I managed to update GSL, only to be then bit by a libkea version mismatch.</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">Anyway, leaving conda behind (at least we can run 6.3.0, but not NCAR Graphics), here's a run down on some of my initial troubleshooting with installation of 6.4.0 on the latest OS X (10.13.1) box. I've installed gcc and am using that instead of the Xcode stuff. The same stuff happens with OS X 10.12.</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">Using gcc-7.1-bin.tar, gfortran-7.1-bin.tar and ncl_ncarg-6.4.0-MacOS_10.12_<wbr class="">64bit_gnu530.tar.gz</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default"><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ which ncl</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">/usr/local/ncl-6.4.0/bin/ncl</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ ncl -V</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">6.4.0</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ otool -L `which ncl`</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">/usr/local/ncl-6.4.0/bin/ncl:</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/lib/libcurl.4.dylib (compatibility version 7.0.0, current version 9.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/lib/libssl.0.9.8.dylib (compatibility version 0.9.8, current version 0.9.8)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/lib/libcrypto.0.9.8.dylib (compatibility version 0.9.8, current version 0.9.8)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/System/Library/Frameworks/<wbr class="">LDAP.framework/Versions/A/LDAP (compatibility version 1.0.0, current version 2.4.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/lib/libiconv.2.dylib (compatibility version 7.0.0, current version 7.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/opt/X11/lib/libfontconfig.1.<wbr class="">dylib (compatibility version 11.0.0, current version 11.2.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/opt/X11/lib/libXrender.1.<wbr class="">dylib (compatibility version 5.0.0, current version 5.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/lib/libbz2.1.0.dylib (compatibility version 1.0.0, current version 1.0.5)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/opt/X11/lib/libXpm.4.dylib (compatibility version 16.0.0, current version 16.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0, current version 10.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/opt/X11/lib/libXext.6.dylib (compatibility version 11.0.0, current version 11.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/local/lib/libgfortran.3.<wbr class="">dylib (compatibility version 4.0.0, current version 4.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/local/lib/libquadmath.0.<wbr class="">dylib (compatibility version 1.0.0, current version 1.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/local/lib/libstdc++.6.<wbr class="">dylib (compatibility version 7.0.0, current version 7.21.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/local/lib/libgomp.1.dylib (compatibility version 2.0.0, current version 2.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-tab-span"> </span>/usr/local/lib/libgcc_s.1.<wbr class="">dylib (compatibility version 1.0.0, current version 1.0.0)</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ env | grep NCARG</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">NCARG_ROOT=/usr/local/ncl-6.4.<wbr class="">0</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ which gcc</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">/usr/local//bin/gcc</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ which gfortran</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">/usr/local//bin/gfortran</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ gfortran --version</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">GNU Fortran (GCC) 7.1.0</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">Copyright (C) 2017 Free Software Foundation, Inc.</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">This is free software; see the source for copying conditions.<span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>There is NO</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ gcc --version</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">gcc (GCC) 7.1.0</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">Copyright (C) 2017 Free Software Foundation, Inc.</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">This is free software; see the source for copying conditions. There is NO</font></p><div class=""><font face="monospace, monospace" class=""></font><br class="webkit-block-placeholder"></div><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.</font></p></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">But to get "ncl -V" to work, which it didn't with either the 10.12 or 10.13 OS X installs, I did:</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default"><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ ncl -V</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">dyld: Library not loaded: /usr/local/lib/libgfortran.3.<wbr class="">dylib</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>Referenced from: /usr/local/ncl-6.4.0/bin/ncl</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>Reason: image not found</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">Abort trap: 6</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ sudo bash</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">bash-3.2# cd /usr/local/lib</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">bash-3.2# ln libgfortran.3.dylib libgfortran.dylib</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">ln: libgfortran.3.dylib: No such file or directory</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">bash-3.2# ln libgfortran.dylib libgfortran.3.dylib</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">bash-3.2# exit</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">exit</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ ncl -V</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">6.4.0</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ ng4ex xy02n -clean</font></p><p class="m_-4277086078938323309gmail-p2"><font face="monospace, monospace" class=""><br class=""></font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">NCAR Graphics NCL Example <xy02n></font></p><p class="m_-4277086078938323309gmail-p2"><font face="monospace, monospace" class=""><br class=""></font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>Copying xy02n.ncl</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>Copying xy02.res</font></p><p class="m_-4277086078938323309gmail-p2"><font face="monospace, monospace" class=""><br class=""></font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">Running NCL...</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>Copyright (C) 1995-2017 - All Rights Reserved</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>University Corporation for Atmospheric Research</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>NCAR Command Language Version 6.4.0</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>The use of this software is governed by a License Agreement.</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class=""><span class="m_-4277086078938323309gmail-Apple-converted-space"> </span>See <a href="http://www.ncl.ucar.edu/" target="_blank" class="">http://www.ncl.ucar.edu/</a> for more details.</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">At line 382 of file ngseti.f</font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">Internal Error: get_unit(): Bad internal unit KIND</font></p><p class="m_-4277086078938323309gmail-p2"><font face="monospace, monospace" class=""><br class=""></font></p><p class="m_-4277086078938323309gmail-p1"><font face="monospace, monospace" class="">ncl failed.</font></p></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">I get the Internal Error thing with gcc and the Xcode version of gcc. </div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">And if I use conda (after I've updated gsl) I get this:</div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div><div class="gmail_default"><div class="gmail_default"><font face="monospace, monospace" class="">IBES4iMac:Desktop hj11$ source activate ncl_stable</font></div><div class="gmail_default"><font face="monospace, monospace" class="">(ncl_stable) IBES4iMac:Desktop hj11$ ncl -V</font></div><div class="gmail_default"><font face="monospace, monospace" class="">dyld: Library not loaded: @rpath/libkea.1.4.7.dylib</font></div><div class="gmail_default"><font face="monospace, monospace" class=""> Referenced from: /Users/hj11/miniconda3/envs/<wbr class="">ncl_stable/lib/libgdal.20.<wbr class="">dylib</font></div><div class="gmail_default"><font face="monospace, monospace" class=""> Reason: Incompatible library version: libgdal.20.dylib requires version 1.4.7 or later, but libkea.1.4.7.dylib provides version 1.4.0</font></div><div class="gmail_default"><font face="monospace, monospace" class="">Abort trap: 6</font></div><div style="font-size:large;font-family:arial,helvetica,sans-serif" class=""><br class=""></div></div><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large">Cheers</div><span class="HOEnZb"><font color="#888888" class=""><div class="gmail_default" style="font-family:arial,helvetica,sans-serif;font-size:large"><br class=""></div>-- <br class=""><div class="m_-4277086078938323309gmail_signature"><div dir="ltr" class=""><div class=""><div dir="ltr" class=""><div class=""><div dir="ltr" class=""><div dir="ltr" class=""><div dir="ltr" class=""><div dir="ltr" class=""><div class=""><div class=""><span style="font-family:arial,helvetica,sans-serif" class="">Henry Johnson, Ph.D</span></div><div class=""><span style="font-family:arial,helvetica,sans-serif" class="">Systems Manager</span></div><div class=""><a href="http://www.brown.edu/academics/institute-environment-society/" target="_blank" class="">Institute at Brown for Environment and Society</a></div><div class=""><span style="font-family:arial,helvetica,sans-serif" class="">IBES RM 258</span></div><div class=""><span style="font-family:arial,helvetica,sans-serif" class=""><a href="tel:(401)%20863-5431" value="+14018635431" target="_blank" class="">401 863 5431</a></span></div></div><div class=""></div></div></div></div></div></div></div></div></div></div>
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