<div dir="ltr"><div><div><div>Luis<br><br></div>I think Mary is saying you need to try the binary. She is the expert, and why I suggested waiting for her to have time to answer more completely. <br><br></div>I would not necessarily try a compile from scratch. I've had to do some updates to older Redhat systems in the past to make things work, but I prefer to let Mary do the compiles. Much easier for me.<br><br></div>gerry<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Oct 27, 2016 at 6:59 PM, Luis del Castillo <span dir="ltr"><<a href="mailto:luis.delcastillo@cathalac.int" target="_blank">luis.delcastillo@cathalac.int</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div link="blue" vlink="purple" lang="ES-PA">
<div class="m_3018288641873566297WordSection1">
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US">Hi Mary I did it because on a previous post Gerry told me about using a binary file could be tricky to run it on my
system configuration.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US">But right now I got it work from the source code the version 6.1.2.
<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US">The error finding the –lnetcdf file was fixed changing the LINUX and the Site file on config/ I was able to add to the
#define ArchRecLibSearch the -L/usr/local/netcdf/4.4.0/pgi/<wbr>14.6/lib which is the location of my netcdf libs. I was hoping as part of the installation process the configuration file read my .tcshrc because on it I have all the variables set.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US">So thanks Its working now<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US"><u></u> <u></u></span></p>
<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US">Previous post
<u></u><u></u></span></b></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US"><u></u> <u></u></span></p>
<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="background:yellow" lang="EN-US">I'd wait for a definitive answer from Mary Haley before you do. I will also see if I can find a package for RHEL/CentOS6 that you might use.
Not sure where I'll have that, but I think I do.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US">gerry<u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US">On Fri, Oct 21, 2016 at 11:41 AM, Luis del Castillo <</span><span style="background:yellow"><a href="mailto:luis.delcastillo@cathalac.int" target="_blank"><span lang="EN-US">luis.delcastillo@cathalac.int</span></a></span><span style="background:yellow" lang="EN-US"><wbr>>
wrote:<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d;background:yellow" lang="EN-US">Thanks I will try to compile it from the source
code.</span><span style="background:yellow" lang="EN-US"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d;background:yellow" lang="EN-US">regards</span><span style="background:yellow" lang="EN-US"><u></u><u></u></span></p>
<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";background:yellow" lang="EN-US">From:</span></b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";background:yellow" lang="EN-US">
Gerry Creager - NOAA Affiliate [mailto:<a href="mailto:gerry.creager@noaa.gov" target="_blank">gerry.creager@noaa.gov</a><wbr>]
<br>
<b>Sent:</b> viernes, 21 de octubre de 2016 7:52 a. m.<br>
<b>To:</b> Luis del Castillo<br>
<b>Cc:</b> <a href="mailto:ncl-install@ucar.edu" target="_blank">ncl-install@ucar.edu</a><br>
<b>Subject:</b> Re: [ncl-install] NCL installation</span><span style="background:yellow" lang="EN-US"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US"> <u></u><u></u></span></p>
<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="background:yellow" lang="EN-US">In general, the CentOS 7 binary will not work for a 6.8 installation, While RHEL and CentOS back-port things, the gcc
version just won't work. You might try getting gcc-4.8.2 from EPEL, but I suspect you'll have other issues.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US">gerry<u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US"> <u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US">On Fri, Oct 21, 2016 at 3:05 AM, Luis del Castillo <</span><span style="background:yellow"><a href="mailto:luis.delcastillo@cathalac.int" target="_blank"><span lang="EN-US">luis.delcastillo@cathalac.int</span></a></span><span style="background:yellow" lang="EN-US"><wbr>>
wrote:<u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US">Hi fellows I am wondering which would be your recommendation If I have Centos 6.8 Netcdf 4.4.0 and All my installation
is on 64 bits. I try with a couple of your precompiled binarys but the only one for Centos is the
<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Verdana","sans-serif";color:black;background:yellow" lang="EN-US">ncl_ncarg-6.3.0.Linux_CentOS7.<wbr>0_x86_64_gcc482.tar.gz
But my gcc is 4.4.7</span><span style="background:yellow" lang="EN-US"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="background:yellow" lang="EN-US">I don’t know if I change my gcc version is going to be an issue for my others binaries</span><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US"><u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri","sans-serif";color:#1f497d" lang="EN-US"><u></u> <u></u></span></p>
<p class="MsoNormal"><b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"" lang="EN-US">From:</span></b><span style="font-size:11.0pt;font-family:"Calibri","sans-serif"" lang="EN-US"> Mary Haley [mailto:<a href="mailto:haley@ucar.edu" target="_blank">haley@ucar.edu</a>]
<br>
<b>Sent:</b> jueves, 27 de octubre de 2016 5:46 p. m.<br>
<b>To:</b> Luis del Castillo<br>
<b>Cc:</b> <a href="mailto:ncl-install@ucar.edu" target="_blank">ncl-install@ucar.edu</a><br>
<b>Subject:</b> Re: [ncl-install] installing ncl<u></u><u></u></span></p><div><div class="h5">
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
<div>
<div>
<p class="MsoNormal"><span lang="EN-US">Hi Luis,<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">A couple of points first:<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">1. You are installing V6.1.2 which is an old version. The current version is 6.3.0. Is there a reason why you are installing an older version?<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">2. Why are you building from source code? We provide binaries for many Linux, MacOS, and Cygwin system, and it appears you are on a Linux system. This is *much* easier than installing from source code.<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">There are a few problems with your build:<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"> - The build can't find the location of your NetCDF libraries or include files<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"> - The build can't find the location of your HDF include files<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"> - The build is referencing the "fl" library which doesn't exist on your system<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">The first two problems can be fixed by adding the path to your NetCDF and HDF paths via the $NCARG/config/Site.local file. You want to add the paths to the LibSearch and IncSearch lines in that file.<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">I believe the third problem is fixed in later versions of NCL, but you can probably fix it by editing $NCARG/config/Template and changing "-lfl" to "-ll".<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US">--Mary<u></u><u></u></span></p>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
</div>
<div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
<div>
<p class="MsoNormal"><span lang="EN-US">On Wed, Oct 26, 2016 at 7:49 PM, Luis del Castillo <</span><a href="mailto:luis.delcastillo@cathalac.int" target="_blank"><span lang="EN-US">luis.delcastillo@cathalac.int</span></a><span lang="EN-US"><wbr>> wrote:<u></u><u></u></span></p>
<blockquote style="border:none;border-left:solid #cccccc 1.0pt;padding:0cm 0cm 0cm 6.0pt;margin-left:4.8pt;margin-top:5.0pt;margin-right:0cm;margin-bottom:5.0pt">
<div>
<div>
<p class="MsoNormal"><span lang="EN-US">Hi fellows I try to install the ncl_ncarg-6.1.2 from source code I did it almost all the binaries except ncl and is one of the most important to me
<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">Attached is the log file can anyone help me to find out why the process cant find the –lnetcdf library if I go it installed.<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US"> <u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">This is a part of my .tcshrc<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US"> <u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv PGI "/usr/local/pgi2014"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv MPICH3 "/usr/local/mpich3"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv ZDIR "/usr/local/zlib/1.2.8"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv H5DIR "/usr/local/hdf5/1.8.11"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv HDF5 "/usr/local/hdf5/1.8.11"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv NCDIR "/usr/local/netcdf/4.4.0/pgi/<wbr>14.6"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv NFDIR "/usr/local/netcdf-f/4.4.4/<wbr>pgi/14.6"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv NETCDF "/usr/local/netcdf/4.4.0/pgi/<wbr>14.6"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv JASPERLIB "/usr/local/jasper/1.900.1/<wbr>pgi/14.6/lib"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv JASPERINC "/usr/local/jasper/1.900.1/<wbr>pgi/14.6/include"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv NCARG "/home/wrf/descargas/ncl_<wbr>ncarg-6.1.2"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv NCARG_ROOT "/home/wrf/ncarg"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv LD_LIBRARY_PATH "$H5DIR/lib:$ZDIR/lib:$NCDIR/<wbr>lib:$NFDIR/lib:/usr/local/<wbr>jasper/1.900.1/pgi/14.6/lib:/<wbr>usr/local/mpich3/lib:/usr/<wbr>local/libpng/1.6.25/pgi/14.6/<wbr>lib:/usr/local/pgi2014/<wbr>linux86-64/14.6/lib:/usr/<wbr>local/pgi2014/linux86-64/14.6/<wbr>libso:/usr/local/maui/lib:/<wbr>usr/local/torque/lib"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv CPPFLAGS "-I$NCDIR/include -I${NFDIR}/include -I$MPICH3/include -I$H5DIR/include"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv LDFLAGS "-L$NCDIR/lib -L$NFDIR/lib -L$MPICH3/lib -L$H5DIR/lib"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">setenv LIBS "-lcurl -lnetcdff -lnetcdf"<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US"> <u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US">thanks</span><u></u><u></u></p>
<p class="MsoNormal"><span lang="EN-US"> </span><u></u><u></u></p>
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<td style="width:25.0%;padding:0cm 0cm 0cm 0cm;height:81.75pt" width="25%">
<p class="MsoNormal"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:black"><img id="m_3018288641873566297m_-8701882092478987989Imagen_x0020_25" src="cid:image001.png@01D23083.9586BC90" alt="Description: http://www.cathalac.org/firma/format_02a.gif" border="0" height="105" width="110"></span><span><u></u><u></u></span></p>
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<td style="width:75.0%;padding:0cm 0cm 0cm 0cm;height:81.75pt" width="75%">
<p class="MsoNormal"><a href="http://www.cathalac.org/" title=""Página Web" t " target="_blank"><b><span style="font-size:10.5pt;font-family:"Tahoma","sans-serif";color:#0063ad;text-decoration:none"><img id="m_3018288641873566297m_-8701882092478987989Imagen_x0020_26" src="cid:image002.png@01D23083.9586BC90" alt="Description: http://www.cathalac.org/firma/logocatha.gif" border="0" height="41" width="200"></span></b></a><b><span style="font-size:10.5pt;font-family:"Tahoma","sans-serif";color:#00accb"><br>
Luis Alejandro Del Castillo Riley </span></b><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad"><br>
<b>Gerente de Tecnologia</b><br>
DIVISIÓN DE TECNOLOGÍAS DE LA INFORMACIÓN Y COMUNICACIÓN<br>
Tel: </span><span><a href="tel:507-317-3235" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif"">507-317-3235</span></a><u></u><u></u></span></p>
<p class="MsoNormal"><u><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad" lang="EN-US">Email:
</span></u><span><a href="mailto:luis.delcastillo@cathalac.int" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0563c1" lang="EN-US">luis.delcastillo@cathalac.int</span></a><a href="http://www.cathalac.org/" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad;text-decoration:none" lang="EN-US"><br>
</span></a></span><a href="https://www.facebook.com/cathalac" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad;text-decoration:none"><img id="m_3018288641873566297m_-8701882092478987989Imagen_x0020_27" src="cid:image003.png@01D23083.9586BC90" alt="Description: http://www.cathalac.org/firma/facebook.png" border="0" height="18" width="20"></span></a><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad" lang="EN-US"> </span><a href="http://twitter.com/#!/CATHALAC" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad;text-decoration:none"><img id="m_3018288641873566297m_-8701882092478987989Imagen_x0020_28" src="cid:image004.png@01D23083.9586BC90" alt="Description: http://www.cathalac.org/firma/twitter.png" border="0" height="18" width="20"></span></a><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad" lang="EN-US"> </span><a href="http://www.linkedin.com/company/2324157" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad;text-decoration:none"><img id="m_3018288641873566297m_-8701882092478987989Imagen_x0020_29" src="cid:image005.png@01D23083.9586BC90" alt="Description: http://www.cathalac.org/firma/linkindin.png" border="0" height="18" width="20"></span></a><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad" lang="EN-US"> </span><a href="http://www.youtube.com/user/CATHALACTV" target="_blank"><span style="font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0063ad;text-decoration:none"><img id="m_3018288641873566297m_-8701882092478987989Imagen_x0020_30" src="cid:image006.png@01D23083.9586BC90" alt="Description: http://www.cathalac.org/firma/youtube.png" border="0" height="18" width="39"></span></a><span lang="EN-US"><u></u><u></u></span></p>
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</tr>
</tbody>
</table>
<p class="MsoNormal"><span lang="EN-US"> <u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-US"> <u></u><u></u></span></p>
</div>
</div>
<p class="MsoNormal" style="margin-bottom:12.0pt"><span lang="EN-US"><br>
______________________________<wbr>_________________<br>
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</blockquote>
</div>
<p class="MsoNormal"><span lang="EN-US"><u></u> <u></u></span></p>
</div>
</div></div></div>
</div>
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<br></blockquote></div><br><br clear="all"><br>-- <br><div class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr">Gerry Creager<div>NSSL/CIMMS</div><div>405.325.6371</div><div>++++++++++++++++++++++</div><div><div>“Big whorls have little whorls,</div><div>That feed on their velocity; </div><div>And little whorls have lesser whorls, </div><div>And so on to viscosity.” </div><div>Lewis Fry Richardson (1881-1953)</div></div></div></div>
</div>