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Well, this is interesting, on a different mac, on which I have been
running ncl for more than 6 months now, grepping for LD under env,
still returns nothing. <br>
<br>
Running:<br>
$ ng4ex gsun01n -clean<br>
<br>
gives me the same error:<br>
<br>
134:~ Jatin$ ng4ex gsun01n -clean<br>
dyld: Library not loaded: /usr/local/lib/libgomp.1.dylib<br>
Referenced from: /Users/Jatin/ncl-6.2.1/bin/ncargpath<br>
Reason: image not found<br>
Trace/BPT trap<br>
<br>
This is a mac where i installed ncl without any issues around June
2015, i updated to OS X El Capitan around September/October 2015 i
think, but did not re-check my ncl installation....This seems to be
related to updating to OS X El Capitan?<br>
Can anyone else reproduce this issue?<br>
<br>
Cheers,<br>
Jatin<br>
<br>
<br>
<div class="moz-cite-prefix">On 26/01/2016 9:51 AM, Jatin Kala
wrote:<br>
</div>
<blockquote
cite="mid:CAFtLUhtw9X4Aei1h8aVJEq0ymg2W3JeWe3=+dE0Pn4RJutdFTQ@mail.gmail.com"
type="cite">
<div dir="ltr">Thanks Mary, see below, grepping for LD returns
nothing.<br>
<div><br>
<br>
134:~ jatinkala$ env | grep NCARG<br>
NCARG_ROOT=/usr/local/ncl-6.3.0<br>
134:~ jatinkala$ env | grep LD<br>
134:~ jatinkala$ which ncl<br>
/usr/local/ncl-6.3.0/bin/ncl<br>
134:~ jatinkala$ otool -L `which ncl`<br>
/usr/local/ncl-6.3.0/bin/ncl:<br>
/opt/X11/lib/libpng15.15.dylib (compatibility version
34.0.0, current version 34.0.0)<br>
/opt/X11/lib/libcairo.2.dylib (compatibility version
11203.0.0, current version 11203.16.0)<br>
/opt/X11/lib/libfontconfig.1.dylib (compatibility version
10.0.0, current version 10.0.0)<br>
/opt/X11/lib/libpixman-1.0.dylib (compatibility version
33.0.0, current version 33.6.0)<br>
/opt/X11/lib/libfreetype.6.dylib (compatibility version
18.0.0, current version 18.2.0)<br>
/opt/X11/lib/libXrender.1.dylib (compatibility version
5.0.0, current version 5.0.0)<br>
/usr/lib/libbz2.1.0.dylib (compatibility version 1.0.0,
current version 1.0.5)<br>
/usr/lib/libiconv.2.dylib (compatibility version 7.0.0,
current version 7.0.0)<br>
/opt/X11/lib/libXpm.4.dylib (compatibility version 16.0.0,
current version 16.0.0)<br>
/opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0,
current version 10.0.0)<br>
/opt/X11/lib/libXext.6.dylib (compatibility version
11.0.0, current version 11.0.0)<br>
/usr/local/lib/libgfortran.3.dylib (compatibility version
4.0.0, current version 4.0.0)<br>
/usr/local/lib/libquadmath.0.dylib (compatibility version
1.0.0, current version 1.0.0)<br>
/usr/local/lib/libstdc++.6.dylib (compatibility version
7.0.0, current version 7.20.0)<br>
/usr/local/lib/libgomp.1.dylib (compatibility version
2.0.0, current version 2.0.0)<br>
/usr/lib/libSystem.B.dylib (compatibility version 1.0.0,
current version 1213.0.0)<br>
/usr/local/lib/libgcc_s.1.dylib (compatibility version
1.0.0, current version 1.0.0)<br>
134:~ jatinkala$ which gcc<br>
/usr/bin/gcc<br>
134:~ jatinkala$ which gfortran<br>
/usr/local/bin/gfortran<br>
134:~ jatinkala$ <br>
<br>
</div>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">On Tue, Jan 26, 2016 at 5:46 AM, Mary
Haley <span dir="ltr"><<a moz-do-not-send="true"
href="mailto:haley@ucar.edu" target="_blank">haley@ucar.edu</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">
<div class="gmail_default" style="font-size:small">Jatin,</div>
<div class="gmail_default" style="font-size:small"><br>
</div>
<div class="gmail_default" style="font-size:small">I think
there is something wrong with your environment. In
general, you shouldn't be needing to create softlinks or
set DYLD_XXXXX.</div>
<div class="gmail_default" style="font-size:small"><br>
</div>
<div class="gmail_default" style="font-size:small">What
does the following report on your system:</div>
<div class="gmail_default" style="font-size:small"><br>
</div>
<div class="gmail_default" style="font-size:small">env |
grep NCARG</div>
<div class="gmail_default" style="font-size:small">env |
grep LD</div>
<div class="gmail_default" style="font-size:small">which
ncl<br>
otool -L `which ncl`</div>
<div class="gmail_default" style="font-size:small">which
gcc</div>
<div class="gmail_default" style="font-size:small">which
gfortran</div>
<div class="gmail_default" style="font-size:small"><br>
</div>
<div class="gmail_default" style="font-size:small">--Mary</div>
<div class="gmail_default" style="font-size:small"><br>
</div>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">
<div>
<div class="h5">On Sun, Jan 24, 2016 at 6:38 PM, Jatin
Kala <span dir="ltr"><<a moz-do-not-send="true"
href="mailto:jatin.kala.jk@gmail.com"
target="_blank">jatin.kala.jk@gmail.com</a>></span>
wrote:<br>
</div>
</div>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">
<div>
<div class="h5">
<div dir="ltr">
<div>
<div>
<div>
<div>
<div>
<div>
<div>
<div>
<div>Hi,<br>
</div>
I am trying to install ncl on a
new mac:<br>
</div>
OX X El Capitan, 10.11.3<br>
<br>
</div>
The pre-compiled binary is:<br>
ncl_ncarg-6.3.0.MacOS_10.10_64bit_nodap_gcc492.tar.gz<br>
<br>
</div>
ncl -v works:<br>
$ ncl -v<br>
Unknown option `-v'<br>
Copyright (C) 1995-2015 - All Rights
Reserved<br>
University Corporation for
Atmospheric Research<br>
NCAR Command Language Version 6.3.0<br>
The use of this software is governed
by a License Agreement.<br>
See <a moz-do-not-send="true"
href="http://www.ncl.ucar.edu/"
target="_blank">http://www.ncl.ucar.edu/</a>
for more details.<br>
ncl 0> <br>
<br>
<br>
</div>
but the ng4ex command fails, even though
i have set DYLD_FALLBACK_LIBRARY_PATH to
gcc5:<br>
<br>
$ echo $DYLD_FALLBACK_LIBRARY_PATH<br>
/opt/local/lib/gcc5<br>
$ ls -l
/opt/local/lib/gcc5/libgomp.1.dylib <br>
lrwxr-xr-x 1 root admin 37 22 Jan
17:38
/opt/local/lib/gcc5/libgomp.1.dylib
->
/opt/local/lib/libgcc/libgomp.1.dylib<br>
$ ng4ex gsun01n -clean<br>
dyld: Library not loaded:
/usr/local/lib/libgomp.1.dylib<br>
Referenced from:
/usr/local/ncl-6.3.0/bin/ncargpath<br>
Reason: image not found<br>
Trace/BPT trap<br>
<br>
</div>
contents of .profile:<br>
$ cat ~/.profile <br>
<br>
# MacPorts Installer addition on
2016-01-22_at_14:17:32: adding an
appropriate PATH variable for use with
MacPorts.<br>
export
PATH="/opt/local/bin:/opt/local/sbin:$PATH"<br>
# Finished adapting your PATH environment
variable for use with MacPorts.<br>
export
DYLD_FALLBACK_LIBRARY_PATH=/opt/local/lib/gcc5<br>
export NCARG_ROOT=/usr/local/ncl-6.3.0<br>
export PATH=$NCARG_ROOT/bin:$PATH<br>
export
DYLD_LIBRARY_PATH=/usr/local/gfortran/lib/<br>
export CLICOLOR=1<br>
export LSCOLORS=ExFxCxDxBxegedabagacad<br>
<br>
<br>
</div>
Any ideas?<br>
</div>
Cheers,<br>
</div>
Jatin<br>
<div>
<div><br>
<div>
<div><br>
<br>
<br>
<br>
<br>
<br>
</div>
</div>
</div>
</div>
</div>
<br>
</div>
</div>
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</blockquote>
</div>
<br>
</div>
</blockquote>
</div>
<br>
</div>
</blockquote>
<br>
<pre class="moz-signature" cols="72">--
Dr. Jatin Kala
Lecturer in Atmospheric Science
Murdoch University,Perth, Western Australia
Tel: (+618) 9360 6297
<a class="moz-txt-link-freetext" href="http://www.jatinkala.com/">http://www.jatinkala.com/</a>
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