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<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Hi David,<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Thanks a lot for your analysis. <o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>While the exact reason for the error is
still unknown, as the c.h and logic32.c etc appear to be normal, the library
has been compiled after I twigged the Makefile following your suggestion.<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'><o:p> </o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>With best regards,<o:p></o:p></span></font></p>
<p class=MsoNormal><font size=2 color=navy face=Arial><span style='font-size:
10.0pt;font-family:Arial;color:navy'>Paul<o:p></o:p></span></font></p>
<div>
<p class=MsoNormal><i><font size=2 color=navy face=Arial><span
style='font-size:10.0pt;font-family:Arial;color:navy;font-style:italic'>Jinyou
(Paul) Liang, Ph.D.</span></font></i><font color=navy><span style='color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><i><font size=2 color=navy face=Arial><span
style='font-size:10.0pt;font-family:Arial;color:navy;font-style:italic'>Staff
Air Pollution Specialist</span></font></i><font color=navy><span
style='color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><st1:State w:st="on"><st1:place w:st="on"><i><font size=2
color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy;font-style:italic'>California</span></font></i></st1:place></st1:State><i><font
size=2 color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy;font-style:italic'> Air Resources Board</span></font></i><font
color=navy><span style='color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><st1:place w:st="on"><st1:City w:st="on"><i><font size=2
color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy;font-style:italic'>Sacramento</span></font></i></st1:City><i><font
size=2 color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy;font-style:italic'>, <st1:State w:st="on">CA</st1:State> <st1:PostalCode
w:st="on">95812</st1:PostalCode></span></font></i></st1:place><font
color=navy><span style='color:navy'><o:p></o:p></span></font></p>
<p class=MsoNormal><i><font size=2 color=navy face=Arial><span
style='font-size:10.0pt;font-family:Arial;color:navy;font-style:italic'>Phone:
(916) 327-8543</span></font></i><o:p></o:p></p>
</div>
<div>
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size=3 face="Times New Roman"><span style='font-size:12.0pt'>
<hr size=2 width="100%" align=center tabindex=-1>
</span></font></div>
<p class=MsoNormal style='margin-left:.5in'><b><font size=2 face=Tahoma><span
style='font-size:10.0pt;font-family:Tahoma;font-weight:bold'>From:</span></font></b><font
size=2 face=Tahoma><span style='font-size:10.0pt;font-family:Tahoma'> David
Brown [mailto:dbrown@ucar.edu] <br>
<b><span style='font-weight:bold'>Sent:</span></b> Thursday, January 27, 2011
4:13 PM<br>
<b><span style='font-weight:bold'>To:</span></b> Liang, Jinyou@ARB<br>
<b><span style='font-weight:bold'>Cc:</span></b> <st1:PersonName w:st="on">ncl-install@ucar.edu</st1:PersonName><br>
<b><span style='font-weight:bold'>Subject:</span></b> Re: [ncl-install] Help on
definition of NGCALLF in c.h file</span></font><o:p></o:p></p>
</div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>Hi Paul,<o:p></o:p></span></font></p>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>I am not sure what is going on here but I can tell you
this much: c.h should not simply be a copy of c.h.sed. The Makefile should have
a rule that invokes the 'sed' utility to create c.h from c.h.sed<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>that looks something like this:<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>c.h: c.h.sed Makefile<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'> @sed -e
's+SED_NGCALLF+$(NGCALLF)+' <c.h.sed >c.h<o:p></o:p></span></font></p>
</div>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>sed should replace the string SED_NGCALLF with the
value of the NGCALLF which is defined earlier in the Makefile. The macro is
used to generate the correct form of a name used to call a Fortran procedure
from within C code. What is NGCALLF set to in the Makefile? It looks as if it
may have been modified from the standard value, which is usually
"reg\#\#_" for Linux. It's possible that pgfortran requires something
else, I don't know.<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>If the standard value is used, where c.h.sed has the
lines:<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>#ifndef NGCALLF<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>#define NGCALLF(reg,caps) SED_NGCALLF<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>#endif /* NGCALLF */<o:p></o:p></span></font></p>
</div>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>c.h should have:<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>#ifndef NGCALLF<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>#define NGCALLF(reg,caps) reg##_<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>#endif /* NGCALLF */<o:p></o:p></span></font></p>
</div>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic32.c should have the following references to
NGCALLF:<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic32.c:<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic32.c:NGCALLF(iand,IAND)(i, j)<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic32.c:NGCALLF(ior,IOR)(i, j)<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic64.c:NGCALLF(ishift,ISHIFT)(i, nshift)<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic64.c:NGCALLF(iand,IAND)(i, j)<o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>logic64.c:NGCALLF(ior,IOR)(i, j)<o:p></o:p></span></font></p>
</div>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>The C preprocessor will replace these lines (as part
of the compilation, you won't see it happen) with the first parameter (reg)
followed by an underscore. <o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>NGCALLF(ishift,ISHIFT)(i, nshift) should become
ishift_(i,nshift), which is the correct way to call a Fortran routine if
gfortran is the Fortran compiler. <o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>If you can't figure it out based on this information,
please send me (off line) the Makefile in c</span></font><span
class=apple-style-span><font size=2 face=Arial><span style='font-size:10.0pt;
font-family:Arial'>ommon/src/libncarg_c plus whatever you used for the system
include file. It will be found in</span></font></span><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><span class=apple-style-span><font
size=2 face=Arial><span style='font-size:10.0pt;font-family:Arial'>the config
directory and be named in the Makefile as the value of SYSTEM_INCLUDE.</span></font></span><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><span class=apple-style-span><font
size=2 face=Arial><span style='font-size:10.0pt;font-family:Arial'> -dave</span></font></span><o:p></o:p></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'> <o:p></o:p></span></font></p>
</div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><o:p> </o:p></span></font></p>
<div>
<div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'>On Jan 27, 2011, at 10:49 AM, Liang, Jinyou@ARB wrote:<o:p></o:p></span></font></p>
</div>
<p class=MsoNormal style='margin-left:.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><br>
<br>
<o:p></o:p></span></font></p>
<u1:smarttagtype namespaceuri="urn:schemas-microsoft-com:office:smarttags" name="PostalCode"><u1:smarttagtype namespaceuri="urn:schemas-microsoft-com:office:smarttags" name="City"><u1:smarttagtype namespaceuri="urn:schemas-microsoft-com:office:smarttags" name="place"><u1:smarttagtype namespaceuri="urn:schemas-microsoft-com:office:smarttags" name="State">
<div link=blue vlink=purple>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>Dear NCL expert,<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy'>Could
you please help me out on the following installation problem with NCL?<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>While installing ncl_ncarg-5.2.1 on
a Linux computer running Redhat Enterprise Linux OS version 5.4 using pgfortran
(v10.5) and gcc (4.1.2 20080704 [Red Hat 4.1.2-48]), I encountered an error in
subdirectory “common/src/libncarg_c”. The use of c.h (a copy of c.h.sed)
yielded duplicate definition of SED_NGCALLF due to dozens of functions named <u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>NGCALLF(lowercase, uppercase)
(char*, int*)<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>In files logic32.c and trnspprt.c,
etc.<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>The complete compiler options are as
follow:<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>gcc -O2 -m64 -fPIC -O -I../../.././include
-I/usr/X11R6/include -I/usr/local/include/freetype2 -DLinux -DIBM
-DNGVERSION='"5.2.1"' -DNCLVERSION='"5.2.1"'
-DNCARGURL='"ngurl"' -DSYSV -D_POSIX_SOURCE -D_XOPEN_SOURCE -DByteSwapped
-DNeedFuncProto -DNDEBUG -c -o rwchinfl.o rwchinfl.c<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>Did I miss anything in compiler
options (I compiled the same package successfully using earlier version of
gcc/RHEL and gfortran), or do I <font color=navy><span style='color:navy'>have</span></font>
to insert unique definitions in the c.h file for each complaint from the
compiler?<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>Your response will be greatly
appreciated.<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.0in'><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy'><u1:p> </u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:.5in'><font size=2
color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy'>Regards,<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=2 face=Arial><span
style='font-size:10.0pt;font-family:Arial'>Paul<u1:p></u1:p></span></font><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><i><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy;
font-style:italic'>Jinyou (Paul) Liang, Ph.D.</span></font></i><u1:p></u1:p><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><i><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy;
font-style:italic'>Staff Air Pollution Specialist</span></font></i><u1:p></u1:p><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><st1:place u2:st="on"><st1:state u2:st="on"><st1:State
w:st="on"><st1:place w:st="on"><i><font size=2 color=navy face=Arial><span
style='font-size:10.0pt;font-family:Arial;color:navy;font-style:italic'>California</span></font></i></st1:place></st1:State></st1:state></st1:place><i><font
size=2 color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy;font-style:italic'> Air Resources Board</span></font></i><u1:p></u1:p><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><st1:place u2:st="on"><st1:city u2:st="on"><st1:place
w:st="on"><st1:City w:st="on"><i><font size=2 color=navy face=Arial><span
style='font-size:10.0pt;font-family:Arial;color:navy;font-style:italic'>Sacramento</span></font></i></st1:City><i><font
size=2 color=navy face=Arial><span style='font-size:10.0pt;font-family:Arial;
color:navy;font-style:italic'></st1:city>, <st1:state u2:st="on"><st1:State
w:st="on">CA</st1:state></st1:State> <st1:postalcode u2:st="on"><st1:PostalCode
w:st="on">95812</st1:postalcode></st1:PostalCode></span></font></i></st1:place></st1:place><u1:p></u1:p><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><i><font size=2 color=navy
face=Arial><span style='font-size:10.0pt;font-family:Arial;color:navy;
font-style:italic'>Phone: (916) 327-8543</span></font></i><u1:p></u1:p><o:p></o:p></p>
<p class=MsoNormal style='margin-left:1.5in'><font size=3 face="Times New Roman"><span
style='font-size:12.0pt'><u1:p> </u1:p><o:p></o:p></span></font></p>
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