[ncl-install] problem-installing-ncl

Kevin Hallock hallock at ucar.edu
Thu Apr 25 13:29:54 MDT 2019


Hi Atefeh,

I’m very sorry about the delayed response to your original question, I hope I can still help you solve this problem.

Based on the error message, I think the fix should just be to install XQuartz (X11 window server for Mac): https://www.xquartz.org/ <https://www.xquartz.org/>

Please let us know if you’re still having trouble running NCL after installing XQuartz.

Kevin

> On Mar 22, 2019, at 4:22 PM, Atefeh Saltanatpouri via ncl-install <ncl-install at ucar.edu> wrote:
> 
> Dear Sir/Madam,
> I am trying to install NCAR on my mac-book. I follow the instruction and first installed conda. 
> but after installing conda
>  I type this command in mac terminal:
> 
> conda create -n ncl_stable -c conda-forge ncl
> 
> 
> after that, as the instruction said I type this one:
> 
> source activate ncl_stable
> 
> but I got this massage:
> 
> -bash: activate: No such file or directory
>  for test I type:
> 
> ncl -V
>   and got this massage:
> 
> dyld: Library not loaded: /opt/X11/lib/libcairo.2.dylib
>   Referenced from: /Users/atefeh/miniconda/envs/ncl_stable/bin/ncl
>   Reason: image not found
> Abort trap: 6
> 
> and type this:
> 
> conda list -n ncl_stable
>     conda --version
>     which ncl
>     ncl -V
>     env  | grep NCARG
> 
> and got this massage:
> 
> 
> Atefehs-MacBook-Pro:~ atefeh$ conda list -n ncl_stable
> # packages in environment at /Users/atefeh/miniconda/envs/ncl_stable:
> #
> # Name                    Version                   Build  Channel
> boost-cpp                 1.68.0            h6f8c590_1000    conda-forge
> bzip2                     1.0.6             h1de35cc_1002    conda-forge
> ca-certificates           2019.3.9             hecc5488_0    conda-forge
> cairo                     1.16.0            h9247486_1000    conda-forge
> curl                      7.64.0               heae2a1f_2    conda-forge
> esmf                      7.1.0             h5f93626_1004    conda-forge
> expat                     2.2.5             h0a44026_1002    conda-forge
> fontconfig                2.13.1            h1027ab8_1000    conda-forge
> freetype                  2.10.0               h24853df_0    conda-forge
> freexl                    1.0.5             h1de35cc_1002    conda-forge
> geos                      3.7.1             h0a44026_1000    conda-forge
> geotiff                   1.4.3             hce09ea4_1000    conda-forge
> gettext                   0.19.8.1          h46ab8bc_1002    conda-forge
> giflib                    5.1.7                h01d97ff_1    conda-forge
> glib                      2.58.3            h2836805_1001    conda-forge
> gsl                       2.4               ha2d443c_1005    conda-forge
> hdf4                      4.2.13            hf3c6af0_1002    conda-forge
> hdf5                      1.10.4          nompi_h646315f_1105    conda-forge
> hdfeos2                   2.20              h207910d_1000    conda-forge
> hdfeos5                   5.1.16               he536a34_4    conda-forge
> icu                       58.2              h0a44026_1000    conda-forge
> jasper                    1.900.1           h636a363_1006    conda-forge
> jpeg                      9c                h1de35cc_1001    conda-forge
> json-c                    0.13.1            h1de35cc_1001    conda-forge
> kealib                    1.4.10            hecf890f_1003    conda-forge
> krb5                      1.16.3            hcfa6398_1001    conda-forge
> libblas                   3.8.0                4_openblas    conda-forge
> libcblas                  3.8.0                4_openblas    conda-forge
> libcurl                   7.64.0               he376013_2    conda-forge
> libcxx                    4.0.1                h579ed51_0  
> libcxxabi                 4.0.1                hebd6815_0    conda-forge
> libdap4                   3.19.1            hae55d67_1000    conda-forge
> libedit                   3.1.20170329      hcfe32e1_1001    conda-forge
> libffi                    3.2.1             h6de7cb9_1006    conda-forge
> libgdal                   2.4.0             h16bfee5_1005    conda-forge
> libgfortran               3.0.1                         0    conda-forge
> libiconv                  1.15              h01d97ff_1005    conda-forge
> libkml                    1.3.0             h71ee1b2_1009    conda-forge
> libnetcdf                 4.6.2             h6b88ef6_1001    conda-forge
> libpng                    1.6.36            ha441bb4_1000    conda-forge
> libpq                     11.2                 h29c6f28_0    conda-forge
> libspatialite             4.3.0a            h0cd9627_1026    conda-forge
> libssh2                   1.8.1                hcdc9a53_0    conda-forge
> libtiff                   4.0.10            h79f4b77_1001    conda-forge
> libxml2                   2.9.8             hf14e9c8_1005    conda-forge
> llvm-meta                 7.0.0                         0    conda-forge
> mpi                       1.0                       mpich    conda-forge
> mpich                     3.2.1             h71abe9c_1008    conda-forge
> ncl                       6.6.2                h2f2bd2c_1    conda-forge
> ncurses                   6.1               h0a44026_1002    conda-forge
> netcdf-fortran            4.4.5             h5ce9b53_1000    conda-forge
> openblas                  0.3.5             h436c29b_1001    conda-forge
> openjpeg                  2.3.0             h3bf0609_1003    conda-forge
> openmp                    7.0.0                h2d50403_0    conda-forge
> openssl                   1.1.1b               h01d97ff_2    conda-forge
> pcre                      8.41              h0a44026_1003    conda-forge
> pixman                    0.34.0            h1de35cc_1003    conda-forge
> poppler                   0.67.0               hb974355_6    conda-forge
> poppler-data              0.4.9                         1    conda-forge
> postgresql                11.2                 h16efa30_0    conda-forge
> proj4                     5.2.0             h1de35cc_1001    conda-forge
> readline                  7.0               hcfe32e1_1001    conda-forge
> sqlite                    3.26.0            h1765d9f_1001    conda-forge
> tk                        8.6.9             ha441bb4_1000    conda-forge
> tzcode                    2018g             h1de35cc_1001    conda-forge
> udunits2                  2.2.27.6          h776b7f1_1001    conda-forge
> xerces-c                  3.2.2             h44e365a_1001    conda-forge
> xz                        5.2.4             h1de35cc_1001    conda-forge
> zlib                      1.2.11            h1de35cc_1004    conda-forge
> Atefehs-MacBook-Pro:~ atefeh$     conda --version
> conda 4.6.8
> Atefehs-MacBook-Pro:~ atefeh$     which ncl
> Atefehs-MacBook-Pro:~ atefeh$     ncl -V
> -bash: ncl: command not found
> Atefehs-MacBook-Pro:~ atefeh$     env  | grep NCARG
> Atefehs-MacBook-Pro:~ atefeh$ 
>   would you please help me with this problems.
> 
> Many thanks for your time and consideration.
> Sincerely,
> Atefeh
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