<p><b>dwj07@fsu.edu</b> 2013-02-25 11:22:07 -0700 (Mon, 25 Feb 2013)</p><p><br>
-- DOCUMENTS COMMIT --<br>
<br>
Updating format of ocean specific users guide material.<br>
</p><hr noshade><pre><font color="gray">Modified: trunk/documents/users_guide/ocn/dimension_table_documentation.tex
===================================================================
--- trunk/documents/users_guide/ocn/dimension_table_documentation.tex 2013-02-25 17:21:52 UTC (rev 2506)
+++ trunk/documents/users_guide/ocn/dimension_table_documentation.tex 2013-02-25 18:22:07 UTC (rev 2507)
@@ -1,7 +1,7 @@
\chapter{Dimensions}
{\small
\begin{center}
-\begin{longtable}{| c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
Name & Description \\
\hline
Modified: trunk/documents/users_guide/ocn/namelist_section_documentation.tex
===================================================================
--- trunk/documents/users_guide/ocn/namelist_section_documentation.tex 2013-02-25 17:21:52 UTC (rev 2506)
+++ trunk/documents/users_guide/ocn/namelist_section_documentation.tex 2013-02-25 18:22:07 UTC (rev 2507)
@@ -3,1120 +3,1953 @@
\label{sec:nm_sec_time_management}
\subsection{config\_do\_restart}
\label{subsec:nm_sec_config_do_restart}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls starting simulation from a restart, or inital conditions that are built into the input file.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_do\_restart: Flag that controls starting simulation from a restart, or inital conditions that are built into the input file.}
+\end{longtable}
+\end{center}
\subsection{config\_start\_time}
\label{subsec:nm_sec_config_start_time}
-\begin{itemize}
- \item Type: string
- \item Units: YYYY\_MM\_DD\_HH:MM:SS
- \item Default Value: '0000-01-01\_00:00:00'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time stamp that describes the initial time of the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & YYYY\_MM\_DD\_HH:MM:SS \\
+ \hline
+ Default Value: & '0000-01-01\_00:00:00' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_start\_time: Time stamp that describes the initial time of the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_stop\_time}
\label{subsec:nm_sec_config_stop_time}
-\begin{itemize}
- \item Type: string
- \item Units: YYYY\_MM\_DD\_HH:MM:SS
- \item Default Value: 'none'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time stamp that describes the ending time of the simulation. If the value is 'none', config\_stop\_time is inferred using config\_run\_duration and config\_start\_time.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & YYYY\_MM\_DD\_HH:MM:SS \\
+ \hline
+ Default Value: & 'none' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_stop\_time: Time stamp that describes the ending time of the simulation. If the value is 'none', config\_stop\_time is inferred using config\_run\_duration and config\_start\_time.}
+\end{longtable}
+\end{center}
\subsection{config\_run\_duration}
\label{subsec:nm_sec_config_run_duration}
-\begin{itemize}
- \item Type: string
- \item Units: DD\_HH:MM:SS
- \item Default Value: '0\_06:00:00'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time stamp that describes the amount of time in the simulation. If the value is 'none', config\_run\_duration is inferred using config\_start\_time and config\_stop\_time.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & DD\_HH:MM:SS \\
+ \hline
+ Default Value: & '0\_06:00:00' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_run\_duration: Time stamp that describes the amount of time in the simulation. If the value is 'none', config\_run\_duration is inferred using config\_start\_time and config\_stop\_time.}
+\end{longtable}
+\end{center}
\subsection{config\_calendar\_type}
\label{subsec:nm_sec_config_calendar_type}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: '360day'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Calendar type that defines the calendar used in the simualtion.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & '360day' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_calendar\_type: Calendar type that defines the calendar used in the simualtion.}
+\end{longtable}
+\end{center}
\section{io}
\label{sec:nm_sec_io}
\subsection{config\_input\_name}
\label{subsec:nm_sec_config_input_name}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'grid.nc'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the full or relative path to the input file.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'grid.nc' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_input\_name: String that defines the full or relative path to the input file.}
+\end{longtable}
+\end{center}
\subsection{config\_output\_name}
\label{subsec:nm_sec_config_output_name}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'output.nc'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the full or relative path to where the output file(s) will be written.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'output.nc' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_output\_name: String that defines the full or relative path to where the output file(s) will be written.}
+\end{longtable}
+\end{center}
\subsection{config\_restart\_name}
\label{subsec:nm_sec_config_restart_name}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'restart.nc'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the full or relative path to where the restart file(s) will be read and written.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'restart.nc' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_restart\_name: String that defines the full or relative path to where the restart file(s) will be read and written.}
+\end{longtable}
+\end{center}
\subsection{config\_restart\_interval}
\label{subsec:nm_sec_config_restart_interval}
-\begin{itemize}
- \item Type: string
- \item Units: DD\_HH:MM:SS
- \item Default Value: '0\_06:00:00'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time stamp that defines how often restart files should be written.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & DD\_HH:MM:SS \\
+ \hline
+ Default Value: & '0\_06:00:00' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_restart\_interval: Time stamp that defines how often restart files should be written.}
+\end{longtable}
+\end{center}
\subsection{config\_output\_interval}
\label{subsec:nm_sec_config_output_interval}
-\begin{itemize}
- \item Type: string
- \item Units: DD\_HH:MM:SS
- \item Default Value: '0\_06:00:00'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time stamp that defines how often output files should be written.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & DD\_HH:MM:SS \\
+ \hline
+ Default Value: & '0\_06:00:00' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_output\_interval: Time stamp that defines how often output files should be written.}
+\end{longtable}
+\end{center}
\subsection{config\_stats\_interval}
\label{subsec:nm_sec_config_stats_interval}
-\begin{itemize}
- \item Type: string
- \item Units: DD\_HH:MM:SS
- \item Default Value: '0\_01:00:00'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time stamp that defines how often statistics output should be written.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & DD\_HH:MM:SS \\
+ \hline
+ Default Value: & '0\_01:00:00' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_stats\_interval: Time stamp that defines how often statistics output should be written.}
+\end{longtable}
+\end{center}
\subsection{config\_write\_stats\_on\_startup}
\label{subsec:nm_sec_config_write_stats_on_startup}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that defines if statistics should be computed using the initial conditions.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_write\_stats\_on\_startup: Flag that defines if statistics should be computed using the initial conditions.}
+\end{longtable}
+\end{center}
\subsection{config\_write\_output\_on\_startup}
\label{subsec:nm_sec_config_write_output_on_startup}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that defines if output should be performed using the initial conditions.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_write\_output\_on\_startup: Flag that defines if output should be performed using the initial conditions.}
+\end{longtable}
+\end{center}
\subsection{config\_frames\_per\_outfile}
\label{subsec:nm_sec_config_frames_per_outfile}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 1000
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Number of time slices in an output file.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1000 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_frames\_per\_outfile: Number of time slices in an output file.}
+\end{longtable}
+\end{center}
\subsection{config\_pio\_num\_iotasks}
\label{subsec:nm_sec_config_pio_num_iotasks}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Number of iotasks used with PIO in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_pio\_num\_iotasks: Number of iotasks used with PIO in the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_pio\_stride}
\label{subsec:nm_sec_config_pio_stride}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 1
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Stride of PIO iotasks in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_pio\_stride: Stride of PIO iotasks in the simulation.}
+\end{longtable}
+\end{center}
\section{time\_integration}
\label{sec:nm_sec_time_integration}
\subsection{config\_dt}
\label{subsec:nm_sec_config_dt}
-\begin{itemize}
- \item Type: real
- \item Units: Seconds
- \item Default Value: 3000.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Length of a single time step.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & Seconds \\
+ \hline
+ Default Value: & 3000.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_dt: Length of a single time step.}
+\end{longtable}
+\end{center}
\subsection{config\_time\_integrator}
\label{subsec:nm_sec_config_time_integrator}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'split\_explicit'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Time integration scheme to be used for the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'split\_explicit' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_time\_integrator: Time integration scheme to be used for the simulation.}
+\end{longtable}
+\end{center}
\section{grid}
\label{sec:nm_sec_grid}
\subsection{config\_num\_halos}
\label{subsec:nm_sec_config_num_halos}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 3
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Defines the number of halos extending outward from owned cells.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 3 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_num\_halos: Defines the number of halos extending outward from owned cells.}
+\end{longtable}
+\end{center}
\subsection{config\_vert\_coord\_movement}
\label{subsec:nm_sec_config_vert_coord_movement}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'uniform\_stretching'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Defines the movement of the vertical coordinate.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'uniform\_stretching' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vert\_coord\_movement: Defines the movement of the vertical coordinate.}
+\end{longtable}
+\end{center}
\subsection{config\_alter\_ICs\_for\_pbcs}
\label{subsec:nm_sec_config_alter_ICs_for_pbcs}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'zlevel\_pbcs\_off'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls how or if partial bottom cells are used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'zlevel\_pbcs\_off' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_alter\_ICs\_for\_pbcs: Flag that controls how or if partial bottom cells are used.}
+\end{longtable}
+\end{center}
\subsection{config\_min\_pbc\_fraction}
\label{subsec:nm_sec_config_min_pbc_fraction}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.10
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Defines the minimum allowed fraction for partial bottom cells.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.10 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_min\_pbc\_fraction: Defines the minimum allowed fraction for partial bottom cells.}
+\end{longtable}
+\end{center}
\subsection{config\_check\_ssh\_consistency}
\label{subsec:nm_sec_config_check_ssh_consistency}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that enables an initial consistency check for sea surface height.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_check\_ssh\_consistency: Flag that enables an initial consistency check for sea surface height.}
+\end{longtable}
+\end{center}
\section{decomposition}
\label{sec:nm_sec_decomposition}
\subsection{config\_block\_decomp\_file\_prefix}
\label{subsec:nm_sec_config_block_decomp_file_prefix}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'graph.info.part.'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the full or relative path and prefix for the block decomposition files.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'graph.info.part.' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_block\_decomp\_file\_prefix: String that defines the full or relative path and prefix for the block decomposition files.}
+\end{longtable}
+\end{center}
\subsection{config\_number\_of\_blocks}
\label{subsec:nm_sec_config_number_of_blocks}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: The number of computational blocks in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_number\_of\_blocks: The number of computational blocks in the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_explicit\_proc\_decomp}
\label{subsec:nm_sec_config_explicit_proc_decomp}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that enables/disables the use of a config\_proc\_decomp\_file to distribute computational blocks through processors.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_explicit\_proc\_decomp: Flag that enables/disables the use of a config\_proc\_decomp\_file to distribute computational blocks through processors.}
+\end{longtable}
+\end{center}
\subsection{config\_proc\_decomp\_file\_prefix}
\label{subsec:nm_sec_config_proc_decomp_file_prefix}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'graph.info.part.'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the fille or relative path and prefix for the processor decomposition files.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'graph.info.part.' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_proc\_decomp\_file\_prefix: String that defines the fille or relative path and prefix for the processor decomposition files.}
+\end{longtable}
+\end{center}
\section{hmix}
\label{sec:nm_sec_hmix}
\input{ocn/section_descriptions/hmix.tex}
\subsection{config\_hmix\_ScaleWithMesh}
\label{subsec:nm_sec_config_hmix_ScaleWithMesh}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if horizontal mixing parameters scale with the mesh density.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_hmix\_ScaleWithMesh: Flag that controls if horizontal mixing parameters scale with the mesh density.}
+\end{longtable}
+\end{center}
\subsection{config\_visc\_vorticity\_term}
\label{subsec:nm_sec_config_visc_vorticity_term}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_visc\_vorticity\_term: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_apvm\_scale\_factor}
\label{subsec:nm_sec_config_apvm_scale_factor}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_apvm\_scale\_factor: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{hmix\_del2}
\label{sec:nm_sec_hmix_del2}
\input{ocn/section_descriptions/hmix_del2.tex}
\subsection{config\_use\_mom\_del2}
\label{subsec:nm_sec_config_use_mom_del2}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if del2 will be used for horizontal mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_mom\_del2: Flag that controls if del2 will be used for horizontal mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_use\_tracer\_del2}
\label{subsec:nm_sec_config_use_tracer_del2}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if del2 will be used for horizontal mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_tracer\_del2: Flag that controls if del2 will be used for horizontal mixing of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_mom\_del2}
\label{subsec:nm_sec_config_mom_del2}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of del2 coefficient for horizontal mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_mom\_del2: Value of del2 coefficient for horizontal mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_tracer\_del2}
\label{subsec:nm_sec_config_tracer_del2}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of del2 coefficient for horizontal mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_tracer\_del2: Value of del2 coefficient for horizontal mixing of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_vorticity\_del2\_scale}
\label{subsec:nm_sec_config_vorticity_del2_scale}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vorticity\_del2\_scale: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{hmix\_del4}
\label{sec:nm_sec_hmix_del4}
\subsection{config\_use\_mom\_del4}
\label{subsec:nm_sec_config_use_mom_del4}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if del4 will be used for horizontal mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_mom\_del4: Flag that controls if del4 will be used for horizontal mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_use\_tracer\_del4}
\label{subsec:nm_sec_config_use_tracer_del4}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if del4 will be used for horizontal mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_tracer\_del4: Flag that controls if del4 will be used for horizontal mixing of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_mom\_del4}
\label{subsec:nm_sec_config_mom_del4}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 5.0e13
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of del4 coefficient for horizontal mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 5.0e13 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_mom\_del4: Value of del4 coefficient for horizontal mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_tracer\_del4}
\label{subsec:nm_sec_config_tracer_del4}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of del4 coefficient for horizontal mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_tracer\_del4: Value of del4 coefficient for horizontal mixing of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_vorticity\_del4\_scale}
\label{subsec:nm_sec_config_vorticity_del4_scale}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vorticity\_del4\_scale: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{hmix\_Leith}
\label{sec:nm_sec_hmix_Leith}
\subsection{config\_use\_Leith\_del2}
\label{subsec:nm_sec_config_use_Leith_del2}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if the Leith closure will be used for horizontal mixing.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_Leith\_del2: Flag that controls if the Leith closure will be used for horizontal mixing.}
+\end{longtable}
+\end{center}
\subsection{config\_Leith\_parameter}
\label{subsec:nm_sec_config_Leith_parameter}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_Leith\_parameter: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_Leith\_dx}
\label{subsec:nm_sec_config_Leith_dx}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 15000.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 15000.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_Leith\_dx: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_Leith\_visc2\_max}
\label{subsec:nm_sec_config_Leith_visc2_max}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 2.5e3
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2.5e3 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_Leith\_visc2\_max: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{standard\_GM}
\label{sec:nm_sec_standard_GM}
\subsection{config\_h\_kappa}
\label{subsec:nm_sec_config_h_kappa}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_h\_kappa: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_h\_kappa\_q}
\label{subsec:nm_sec_config_h_kappa_q}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_h\_kappa\_q: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{Rayleigh\_damping}
\label{sec:nm_sec_Rayleigh_damping}
\subsection{config\_Rayleigh\_friction}
\label{subsec:nm_sec_config_Rayleigh_friction}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if Rayleigh friction will be used in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_Rayleigh\_friction: Flag that controls if Rayleigh friction will be used in the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_Rayleigh\_damping\_coeff}
\label{subsec:nm_sec_config_Rayleigh_damping_coeff}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of the Rayleigh friction coefficient.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_Rayleigh\_damping\_coeff: Value of the Rayleigh friction coefficient.}
+\end{longtable}
+\end{center}
\section{vmix}
\label{sec:nm_sec_vmix}
\subsection{config\_implicit\_vertical\_mix}
\label{subsec:nm_sec_config_implicit_vertical_mix}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEPRECATED}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_implicit\_vertical\_mix: {\bf \color{red} DEPRECATED}}
+\end{longtable}
+\end{center}
\subsection{config\_convective\_visc}
\label{subsec:nm_sec_config_convective_visc}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of coefficient for convective vertical mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_convective\_visc: Value of coefficient for convective vertical mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_convective\_diff}
\label{subsec:nm_sec_config_convective_diff}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of coefficient for convective vertical mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_convective\_diff: Value of coefficient for convective vertical mixing of tracers.}
+\end{longtable}
+\end{center}
\section{vmix\_const}
\label{sec:nm_sec_vmix_const}
\subsection{config\_use\_const\_visc}
\label{subsec:nm_sec_config_use_const_visc}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if constant vertical mixing of momentum is used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_const\_visc: Flag that controls if constant vertical mixing of momentum is used.}
+\end{longtable}
+\end{center}
\subsection{config\_use\_const\_diff}
\label{subsec:nm_sec_config_use_const_diff}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if constant vertical mixing of tracers is used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_const\_diff: Flag that controls if constant vertical mixing of tracers is used.}
+\end{longtable}
+\end{center}
\subsection{config\_vert\_visc}
\label{subsec:nm_sec_config_vert_visc}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 2.5e-4
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of coefficient for constant vertical mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2.5e-4 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vert\_visc: Value of coefficient for constant vertical mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_vert\_diff}
\label{subsec:nm_sec_config_vert_diff}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 2.5e-5
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of coefficient for constant vertical mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2.5e-5 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vert\_diff: Value of coefficient for constant vertical mixing of tracers.}
+\end{longtable}
+\end{center}
\section{vmix\_rich}
\label{sec:nm_sec_vmix_rich}
\subsection{config\_use\_rich\_visc}
\label{subsec:nm_sec_config_use_rich_visc}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if Richarson number vertical mixing of momentum is used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_rich\_visc: Flag that controls if Richarson number vertical mixing of momentum is used.}
+\end{longtable}
+\end{center}
\subsection{config\_use\_rich\_diff}
\label{subsec:nm_sec_config_use_rich_diff}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if Richarson number vertical mixing of tracers is used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_rich\_diff: Flag that controls if Richarson number vertical mixing of tracers is used.}
+\end{longtable}
+\end{center}
\subsection{config\_bkrd\_vert\_visc}
\label{subsec:nm_sec_config_bkrd_vert_visc}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0e-4
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of coefficient for Richardson number vertical mixing of momentum.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0e-4 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_bkrd\_vert\_visc: Value of coefficient for Richardson number vertical mixing of momentum.}
+\end{longtable}
+\end{center}
\subsection{config\_bkrd\_vert\_diff}
\label{subsec:nm_sec_config_bkrd_vert_diff}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0e-5
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of coefficient for Richardson number vertical mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0e-5 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_bkrd\_vert\_diff: Value of coefficient for Richardson number vertical mixing of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_rich\_mix}
\label{subsec:nm_sec_config_rich_mix}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.005
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.005 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_rich\_mix: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{vmix\_tanh}
\label{sec:nm_sec_vmix_tanh}
\subsection{config\_use\_tanh\_visc}
\label{subsec:nm_sec_config_use_tanh_visc}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if hyperbolic tangent vertical mixing of momentum is used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_tanh\_visc: Flag that controls if hyperbolic tangent vertical mixing of momentum is used.}
+\end{longtable}
+\end{center}
\subsection{config\_use\_tanh\_diff}
\label{subsec:nm_sec_config_use_tanh_diff}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if hyperbolic tangent vertical mixing of tracers is used.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_tanh\_diff: Flag that controls if hyperbolic tangent vertical mixing of tracers is used.}
+\end{longtable}
+\end{center}
\subsection{config\_max\_visc\_tanh}
\label{subsec:nm_sec_config_max_visc_tanh}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 2.5e-1
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2.5e-1 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_max\_visc\_tanh: {\bf \color{red} DEFINE} }
+\end{longtable}
+\end{center}
\subsection{config\_min\_visc\_tanh}
\label{subsec:nm_sec_config_min_visc_tanh}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0e-4
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0e-4 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_min\_visc\_tanh: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_max\_diff\_tanh}
\label{subsec:nm_sec_config_max_diff_tanh}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 2.5e-2
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2.5e-2 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_max\_diff\_tanh: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_min\_diff\_tanh}
\label{subsec:nm_sec_config_min_diff_tanh}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0e-5
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0e-5 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_min\_diff\_tanh: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_zMid\_tanh}
\label{subsec:nm_sec_config_zMid_tanh}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: -100
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & -100 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_zMid\_tanh: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_zWidth\_tanh}
\label{subsec:nm_sec_config_zWidth_tanh}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 100
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 100 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_zWidth\_tanh: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{forcing}
\label{sec:nm_sec_forcing}
\subsection{config\_use\_monthly\_forcing}
\label{subsec:nm_sec_config_use_monthly_forcing}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if monthly forcing is used in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_use\_monthly\_forcing: Flag that controls if monthly forcing is used in the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_restoreTS}
\label{subsec:nm_sec_config_restoreTS}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls is temperature and salinity restoring is used in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_restoreTS: Flag that controls is temperature and salinity restoring is used in the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_restoreT\_timescale}
\label{subsec:nm_sec_config_restoreT_timescale}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 90.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value in days of the restoring timescale for temperature.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 90.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_restoreT\_timescale: Value in days of the restoring timescale for temperature.}
+\end{longtable}
+\end{center}
\subsection{config\_restoreS\_timescale}
\label{subsec:nm_sec_config_restoreS_timescale}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 90.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value in days of the restoring timescale for salinity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 90.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_restoreS\_timescale: Value in days of the restoring timescale for salinity.}
+\end{longtable}
+\end{center}
\section{advection}
\label{sec:nm_sec_advection}
\subsection{config\_vert\_tracer\_adv}
\label{subsec:nm_sec_config_vert_tracer_adv}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'stencil'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEPRECATED}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'stencil' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vert\_tracer\_adv: {\bf \color{red} DEPRECATED}}
+\end{longtable}
+\end{center}
\subsection{config\_vert\_tracer\_adv\_order}
\label{subsec:nm_sec_config_vert_tracer_adv_order}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 3
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Order of vertical reconstruction of tracers used for vertical advection.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 3 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_vert\_tracer\_adv\_order: Order of vertical reconstruction of tracers used for vertical advection.}
+\end{longtable}
+\end{center}
\subsection{config\_horiz\_tracer\_adv\_order}
\label{subsec:nm_sec_config_horiz_tracer_adv_order}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 3
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Order of horizontal reconstruction of tracers used for horizontal advection.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 3 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_horiz\_tracer\_adv\_order: Order of horizontal reconstruction of tracers used for horizontal advection.}
+\end{longtable}
+\end{center}
\subsection{config\_coef\_3rd\_order}
\label{subsec:nm_sec_config_coef_3rd_order}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.25
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Blending coefficient for 3rd and 4th order horizontal reconstruction of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.25 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_coef\_3rd\_order: Blending coefficient for 3rd and 4th order horizontal reconstruction of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_monotonic}
\label{subsec:nm_sec_config_monotonic}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that controls if monotonic advection is used in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_monotonic: Flag that controls if monotonic advection is used in the simulation.}
+\end{longtable}
+\end{center}
\section{bottom\_drag}
\label{sec:nm_sec_bottom_drag}
\subsection{config\_bottom\_drag\_coeff}
\label{subsec:nm_sec_config_bottom_drag_coeff}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0e-3
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of the bottom drag coefficient.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0e-3 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_bottom\_drag\_coeff: Value of the bottom drag coefficient.}
+\end{longtable}
+\end{center}
\section{pressure\_gradient}
\label{sec:nm_sec_pressure_gradient}
\subsection{config\_pressure\_gradient\_type}
\label{subsec:nm_sec_config_pressure_gradient_type}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'pressure\_and\_zmid'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the type of pressure gradient used in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'pressure\_and\_zmid' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_pressure\_gradient\_type: String that defines the type of pressure gradient used in the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_rho0}
\label{subsec:nm_sec_config_rho0}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1014.65
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of the reference density for the Boussineq approximation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1014.65 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_rho0: Value of the reference density for the Boussineq approximation.}
+\end{longtable}
+\end{center}
\section{eos}
\label{sec:nm_sec_eos}
\subsection{config\_eos\_type}
\label{subsec:nm_sec_config_eos_type}
-\begin{itemize}
- \item Type: string
- \item Units: None
- \item Default Value: 'jm'
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: String that defines the equation of state used in the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 'jm' \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_eos\_type: String that defines the equation of state used in the simulation.}
+\end{longtable}
+\end{center}
\section{eos\_linear}
\label{sec:nm_sec_eos_linear}
\subsection{config\_eos\_linear\_alpha}
\label{subsec:nm_sec_config_eos_linear_alpha}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 2.55e-1
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of temperature expansion coefficient used in the linear equation of state.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2.55e-1 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_eos\_linear\_alpha: Value of temperature expansion coefficient used in the linear equation of state.}
+\end{longtable}
+\end{center}
\subsection{config\_eos\_linear\_beta}
\label{subsec:nm_sec_config_eos_linear_beta}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 7.64e-1
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of salinity expansion coefficient used in the linear equation of state.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 7.64e-1 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_eos\_linear\_beta: Value of salinity expansion coefficient used in the linear equation of state.}
+\end{longtable}
+\end{center}
\subsection{config\_eos\_linear\_Tref}
\label{subsec:nm_sec_config_eos_linear_Tref}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 19.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of the reference temperature used in the linear equation of state.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 19.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_eos\_linear\_Tref: Value of the reference temperature used in the linear equation of state.}
+\end{longtable}
+\end{center}
\subsection{config\_eos\_linear\_Sref}
\label{subsec:nm_sec_config_eos_linear_Sref}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 35.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of the reference salinity used in the linear equation of state.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 35.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_eos\_linear\_Sref: Value of the reference salinity used in the linear equation of state.}
+\end{longtable}
+\end{center}
\subsection{config\_eos\_linear\_rhoref}
\label{subsec:nm_sec_config_eos_linear_rhoref}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1025.022
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Value of the reference density used in the linear equation of state.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1025.022 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_eos\_linear\_rhoref: Value of the reference density used in the linear equation of state.}
+\end{longtable}
+\end{center}
\section{split\_explicit\_ts}
\label{sec:nm_sec_split_explicit_ts}
\subsection{config\_n\_ts\_iter}
\label{subsec:nm_sec_config_n_ts_iter}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 2
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_n\_ts\_iter: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_n\_bcl\_iter\_beg}
\label{subsec:nm_sec_config_n_bcl_iter_beg}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 1
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_n\_bcl\_iter\_beg: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_n\_bcl\_iter\_mid}
\label{subsec:nm_sec_config_n_bcl_iter_mid}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 2
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_n\_bcl\_iter\_mid: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_n\_bcl\_iter\_end}
\label{subsec:nm_sec_config_n_bcl_iter_end}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 2
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_n\_bcl\_iter\_end: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_n\_btr\_subcycles}
\label{subsec:nm_sec_config_n_btr_subcycles}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 20
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 20 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_n\_btr\_subcycles: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_n\_btr\_cor\_iter}
\label{subsec:nm_sec_config_n_btr_cor_iter}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 2
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_n\_btr\_cor\_iter: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_u\_correction}
\label{subsec:nm_sec_config_u_correction}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .true.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .true. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_u\_correction: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_btr\_subcycle\_loop\_factor}
\label{subsec:nm_sec_config_btr_subcycle_loop_factor}
-\begin{itemize}
- \item Type: integer
- \item Units: None
- \item Default Value: 2
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 2 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_btr\_subcycle\_loop\_factor: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_btr\_gam1\_uWt1}
\label{subsec:nm_sec_config_btr_gam1_uWt1}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 0.5
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 0.5 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_btr\_gam1\_uWt1: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_btr\_gam2\_SSHWt1}
\label{subsec:nm_sec_config_btr_gam2_SSHWt1}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_btr\_gam2\_SSHWt1: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_btr\_gam3\_uWt2}
\label{subsec:nm_sec_config_btr_gam3_uWt2}
-\begin{itemize}
- \item Type: real
- \item Units: None
- \item Default Value: 1.0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & 1.0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_btr\_gam3\_uWt2: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_btr\_solve\_SSH2}
\label{subsec:nm_sec_config_btr_solve_SSH2}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_btr\_solve\_SSH2: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\section{sw\_model}
\label{sec:nm_sec_sw_model}
\subsection{config\_test\_case}
\label{subsec:nm_sec_config_test_case}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Default Value: 0
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Default Value: & 0 \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_test\_case: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\section{debug}
\label{sec:nm_sec_debug}
\subsection{config\_check\_zlevel\_consistency}
\label{subsec:nm_sec_config_check_zlevel_consistency}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that enables a zlevel consistency check on initialization.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_check\_zlevel\_consistency: Flag that enables a zlevel consistency check on initialization.}
+\end{longtable}
+\end{center}
\subsection{config\_filter\_btr\_mode}
\label{subsec:nm_sec_config_filter_btr_mode}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that enables the filtering of the barotropic mode.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_filter\_btr\_mode: Flag that enables the filtering of the barotropic mode.}
+\end{longtable}
+\end{center}
\subsection{config\_prescribe\_velocity}
\label{subsec:nm_sec_config_prescribe_velocity}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that enables prescribed velocities, read from the input file, that remain constant throughout the simulation.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_prescribe\_velocity: Flag that enables prescribed velocities, read from the input file, that remain constant throughout the simulation.}
+\end{longtable}
+\end{center}
\subsection{config\_prescribe\_thickness}
\label{subsec:nm_sec_config_prescribe_thickness}
-\begin{itemize}
- \item Type: logical
- \item Units: {\bf \color{red} MISSING}
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_prescribe\_thickness: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{config\_include\_KE\_vertex}
\label{subsec:nm_sec_config_include_KE_vertex}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: {\bf \color{red} DEFINE}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_include\_KE\_vertex: {\bf \color{red} DEFINE}}
+\end{longtable}
+\end{center}
\subsection{config\_check\_tracer\_monotonicity}
\label{subsec:nm_sec_config_check_tracer_monotonicity}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that enables the check for monotonicity of tracers. Only available if config\_monotoic is true.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_check\_tracer\_monotonicity: Flag that enables the check for monotonicity of tracers. Only available if config\_monotoic is true.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_h\_all\_tend}
\label{subsec:nm_sec_config_disable_h_all_tend}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables all thickness tendencies.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_h\_all\_tend: Flag that disables all thickness tendencies.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_h\_hadv}
\label{subsec:nm_sec_config_disable_h_hadv}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables horizontal advection of thickness.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_h\_hadv: Flag that disables horizontal advection of thickness.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_h\_vadv}
\label{subsec:nm_sec_config_disable_h_vadv}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables vertical advection of thickness.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_h\_vadv: Flag that disables vertical advection of thickness.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_all\_tend}
\label{subsec:nm_sec_config_disable_u_all_tend}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables all velocitiy tendencies.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_all\_tend: Flag that disables all velocitiy tendencies.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_coriolis}
\label{subsec:nm_sec_config_disable_u_coriolis}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables Coriolis tendencies of velocity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_coriolis: Flag that disables Coriolis tendencies of velocity.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_pgrad}
\label{subsec:nm_sec_config_disable_u_pgrad}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables pressure gradient tendencies of velocity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_pgrad: Flag that disables pressure gradient tendencies of velocity.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_hmix}
\label{subsec:nm_sec_config_disable_u_hmix}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables horizontal mixing tendencies of velocity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_hmix: Flag that disables horizontal mixing tendencies of velocity.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_windstress}
\label{subsec:nm_sec_config_disable_u_windstress}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables windstress tendencies of velocity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_windstress: Flag that disables windstress tendencies of velocity.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_vmix}
\label{subsec:nm_sec_config_disable_u_vmix}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables vertical mixing of velocity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_vmix: Flag that disables vertical mixing of velocity.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_u\_vadv}
\label{subsec:nm_sec_config_disable_u_vadv}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables vertical advection tendencies of velocity.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_u\_vadv: Flag that disables vertical advection tendencies of velocity.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_tr\_all\_tend}
\label{subsec:nm_sec_config_disable_tr_all_tend}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables all tracer tendencies.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_tr\_all\_tend: Flag that disables all tracer tendencies.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_tr\_adv}
\label{subsec:nm_sec_config_disable_tr_adv}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables advection tendencites of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_tr\_adv: Flag that disables advection tendencites of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_tr\_hmix}
\label{subsec:nm_sec_config_disable_tr_hmix}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag that disables horizontal mixing tendencites of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_tr\_hmix: Flag that disables horizontal mixing tendencites of tracers.}
+\end{longtable}
+\end{center}
\subsection{config\_disable\_tr\_vmix}
\label{subsec:nm_sec_config_disable_tr_vmix}
-\begin{itemize}
- \item Type: logical
- \item Units: None
- \item Default Value: .false.
- \item Possible Values: {\bf \color{red} MISSING}
- \item Description: Flag taht disables vertical mixing of tracers.
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & logical \\
+ \hline
+ Units: & None \\
+ \hline
+ Default Value: & .false. \\
+ \hline
+ Possible Values: & {\bf \color{red} MISSING} \\
+ \hline
+ \caption{config\_disable\_tr\_vmix: Flag taht disables vertical mixing of tracers.}
+\end{longtable}
+\end{center}
Modified: trunk/documents/users_guide/ocn/namelist_table_documentation.tex
===================================================================
--- trunk/documents/users_guide/ocn/namelist_table_documentation.tex 2013-02-25 17:21:52 UTC (rev 2506)
+++ trunk/documents/users_guide/ocn/namelist_table_documentation.tex 2013-02-25 18:22:07 UTC (rev 2507)
@@ -3,19 +3,19 @@
\label{sec:nm_tab_time_management}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_do_restart]{config\_do\_restart} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_do_restart]{config\_do\_restart} & Flag that controls starting simulation from a restart, or inital conditions that are built into the input file. \\
\hline
- string \hyperref[subsec:nm_sec_config_start_time]{config\_start\_time} & '0000-01-01\_00:00:00' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_start_time]{config\_start\_time} & Time stamp that describes the initial time of the simulation. \\
\hline
- string \hyperref[subsec:nm_sec_config_stop_time]{config\_stop\_time} & 'none' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_stop_time]{config\_stop\_time} & Time stamp that describes the ending time of the simulation. If the value is 'none', config\_stop\_time is inferred using config\_run\_duration and config\_start\_time. \\
\hline
- string \hyperref[subsec:nm_sec_config_run_duration]{config\_run\_duration} & '0\_06:00:00' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_run_duration]{config\_run\_duration} & Time stamp that describes the amount of time in the simulation. If the value is 'none', config\_run\_duration is inferred using config\_start\_time and config\_stop\_time. \\
\hline
- string \hyperref[subsec:nm_sec_config_calendar_type]{config\_calendar\_type} & '360day' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_calendar_type]{config\_calendar\_type} & Calendar type that defines the calendar used in the simualtion. \\
\hline
\end{longtable}
\end{center}
@@ -24,31 +24,31 @@
\label{sec:nm_tab_io}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- string \hyperref[subsec:nm_sec_config_input_name]{config\_input\_name} & 'grid.nc' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_input_name]{config\_input\_name} & String that defines the full or relative path to the input file. \\
\hline
- string \hyperref[subsec:nm_sec_config_output_name]{config\_output\_name} & 'output.nc' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_output_name]{config\_output\_name} & String that defines the full or relative path to where the output file(s) will be written. \\
\hline
- string \hyperref[subsec:nm_sec_config_restart_name]{config\_restart\_name} & 'restart.nc' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_restart_name]{config\_restart\_name} & String that defines the full or relative path to where the restart file(s) will be read and written. \\
\hline
- string \hyperref[subsec:nm_sec_config_restart_interval]{config\_restart\_interval} & '0\_06:00:00' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_restart_interval]{config\_restart\_interval} & Time stamp that defines how often restart files should be written. \\
\hline
- string \hyperref[subsec:nm_sec_config_output_interval]{config\_output\_interval} & '0\_06:00:00' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_output_interval]{config\_output\_interval} & Time stamp that defines how often output files should be written. \\
\hline
- string \hyperref[subsec:nm_sec_config_stats_interval]{config\_stats\_interval} & '0\_01:00:00' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_stats_interval]{config\_stats\_interval} & Time stamp that defines how often statistics output should be written. \\
\hline
- logical \hyperref[subsec:nm_sec_config_write_stats_on_startup]{config\_write\_stats\_on\_startup} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_write_stats_on_startup]{config\_write\_stats\_on\_startup} & Flag that defines if statistics should be computed using the initial conditions. \\
\hline
- logical \hyperref[subsec:nm_sec_config_write_output_on_startup]{config\_write\_output\_on\_startup} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_write_output_on_startup]{config\_write\_output\_on\_startup} & Flag that defines if output should be performed using the initial conditions. \\
\hline
- integer \hyperref[subsec:nm_sec_config_frames_per_outfile]{config\_frames\_per\_outfile} & 1000 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_frames_per_outfile]{config\_frames\_per\_outfile} & Number of time slices in an output file. \\
\hline
- integer \hyperref[subsec:nm_sec_config_pio_num_iotasks]{config\_pio\_num\_iotasks} & 0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_pio_num_iotasks]{config\_pio\_num\_iotasks} & Number of iotasks used with PIO in the simulation. \\
\hline
- integer \hyperref[subsec:nm_sec_config_pio_stride]{config\_pio\_stride} & 1 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_pio_stride]{config\_pio\_stride} & Stride of PIO iotasks in the simulation. \\
\hline
\end{longtable}
\end{center}
@@ -57,13 +57,13 @@
\label{sec:nm_tab_time_integration}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- real \hyperref[subsec:nm_sec_config_dt]{config\_dt} & 3000.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_dt]{config\_dt} & Length of a single time step. \\
\hline
- string \hyperref[subsec:nm_sec_config_time_integrator]{config\_time\_integrator} & 'split\_explicit' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_time_integrator]{config\_time\_integrator} & Time integration scheme to be used for the simulation. \\
\hline
\end{longtable}
\end{center}
@@ -72,19 +72,19 @@
\label{sec:nm_tab_grid}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- integer \hyperref[subsec:nm_sec_config_num_halos]{config\_num\_halos} & 3 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_num_halos]{config\_num\_halos} & Defines the number of halos extending outward from owned cells. \\
\hline
- string \hyperref[subsec:nm_sec_config_vert_coord_movement]{config\_vert\_coord\_movement} & 'uniform\_stretching' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vert_coord_movement]{config\_vert\_coord\_movement} & Defines the movement of the vertical coordinate. \\
\hline
- string \hyperref[subsec:nm_sec_config_alter_ICs_for_pbcs]{config\_alter\_ICs\_for\_pbcs} & 'zlevel\_pbcs\_off' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_alter_ICs_for_pbcs]{config\_alter\_ICs\_for\_pbcs} & Flag that controls how or if partial bottom cells are used. \\
\hline
- real \hyperref[subsec:nm_sec_config_min_pbc_fraction]{config\_min\_pbc\_fraction} & 0.10 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_min_pbc_fraction]{config\_min\_pbc\_fraction} & Defines the minimum allowed fraction for partial bottom cells. \\
\hline
- logical \hyperref[subsec:nm_sec_config_check_ssh_consistency]{config\_check\_ssh\_consistency} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_check_ssh_consistency]{config\_check\_ssh\_consistency} & Flag that enables an initial consistency check for sea surface height. \\
\hline
\end{longtable}
\end{center}
@@ -93,17 +93,17 @@
\label{sec:nm_tab_decomposition}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- string \hyperref[subsec:nm_sec_config_block_decomp_file_prefix]{config\_block\_decomp\_file\_prefix} & 'graph.info.part.' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_block_decomp_file_prefix]{config\_block\_decomp\_file\_prefix} & String that defines the full or relative path and prefix for the block decomposition files. \\
\hline
- integer \hyperref[subsec:nm_sec_config_number_of_blocks]{config\_number\_of\_blocks} & 0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_number_of_blocks]{config\_number\_of\_blocks} & The number of computational blocks in the simulation. \\
\hline
- logical \hyperref[subsec:nm_sec_config_explicit_proc_decomp]{config\_explicit\_proc\_decomp} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_explicit_proc_decomp]{config\_explicit\_proc\_decomp} & Flag that enables/disables the use of a config\_proc\_decomp\_file to distribute computational blocks through processors. \\
\hline
- string \hyperref[subsec:nm_sec_config_proc_decomp_file_prefix]{config\_proc\_decomp\_file\_prefix} & 'graph.info.part.' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_proc_decomp_file_prefix]{config\_proc\_decomp\_file\_prefix} & String that defines the fille or relative path and prefix for the processor decomposition files. \\
\hline
\end{longtable}
\end{center}
@@ -113,15 +113,15 @@
\input{ocn/section_descriptions/hmix.tex}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_hmix_ScaleWithMesh]{config\_hmix\_ScaleWithMesh} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_hmix_ScaleWithMesh]{config\_hmix\_ScaleWithMesh} & Flag that controls if horizontal mixing parameters scale with the mesh density. \\
\hline
- logical \hyperref[subsec:nm_sec_config_visc_vorticity_term]{config\_visc\_vorticity\_term} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_visc_vorticity_term]{config\_visc\_vorticity\_term} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_apvm_scale_factor]{config\_apvm\_scale\_factor} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_apvm_scale_factor]{config\_apvm\_scale\_factor} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -131,19 +131,19 @@
\input{ocn/section_descriptions/hmix_del2.tex}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_mom_del2]{config\_use\_mom\_del2} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_mom_del2]{config\_use\_mom\_del2} & Flag that controls if del2 will be used for horizontal mixing of momentum. \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_tracer_del2]{config\_use\_tracer\_del2} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_tracer_del2]{config\_use\_tracer\_del2} & Flag that controls if del2 will be used for horizontal mixing of tracers. \\
\hline
- real \hyperref[subsec:nm_sec_config_mom_del2]{config\_mom\_del2} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_mom_del2]{config\_mom\_del2} & Value of del2 coefficient for horizontal mixing of momentum. \\
\hline
- real \hyperref[subsec:nm_sec_config_tracer_del2]{config\_tracer\_del2} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_tracer_del2]{config\_tracer\_del2} & Value of del2 coefficient for horizontal mixing of tracers. \\
\hline
- real \hyperref[subsec:nm_sec_config_vorticity_del2_scale]{config\_vorticity\_del2\_scale} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vorticity_del2_scale]{config\_vorticity\_del2\_scale} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -152,19 +152,19 @@
\label{sec:nm_tab_hmix_del4}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_mom_del4]{config\_use\_mom\_del4} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_mom_del4]{config\_use\_mom\_del4} & Flag that controls if del4 will be used for horizontal mixing of momentum. \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_tracer_del4]{config\_use\_tracer\_del4} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_tracer_del4]{config\_use\_tracer\_del4} & Flag that controls if del4 will be used for horizontal mixing of tracers. \\
\hline
- real \hyperref[subsec:nm_sec_config_mom_del4]{config\_mom\_del4} & 5.0e13 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_mom_del4]{config\_mom\_del4} & Value of del4 coefficient for horizontal mixing of momentum. \\
\hline
- real \hyperref[subsec:nm_sec_config_tracer_del4]{config\_tracer\_del4} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_tracer_del4]{config\_tracer\_del4} & Value of del4 coefficient for horizontal mixing of tracers. \\
\hline
- real \hyperref[subsec:nm_sec_config_vorticity_del4_scale]{config\_vorticity\_del4\_scale} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vorticity_del4_scale]{config\_vorticity\_del4\_scale} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -173,17 +173,17 @@
\label{sec:nm_tab_hmix_Leith}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_Leith_del2]{config\_use\_Leith\_del2} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_Leith_del2]{config\_use\_Leith\_del2} & Flag that controls if the Leith closure will be used for horizontal mixing. \\
\hline
- real \hyperref[subsec:nm_sec_config_Leith_parameter]{config\_Leith\_parameter} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_Leith_parameter]{config\_Leith\_parameter} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_Leith_dx]{config\_Leith\_dx} & 15000.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_Leith_dx]{config\_Leith\_dx} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_Leith_visc2_max]{config\_Leith\_visc2\_max} & 2.5e3 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_Leith_visc2_max]{config\_Leith\_visc2\_max} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -192,13 +192,13 @@
\label{sec:nm_tab_standard_GM}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- real \hyperref[subsec:nm_sec_config_h_kappa]{config\_h\_kappa} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_h_kappa]{config\_h\_kappa} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_h_kappa_q]{config\_h\_kappa\_q} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_h_kappa_q]{config\_h\_kappa\_q} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -207,13 +207,13 @@
\label{sec:nm_tab_Rayleigh_damping}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_Rayleigh_friction]{config\_Rayleigh\_friction} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_Rayleigh_friction]{config\_Rayleigh\_friction} & Flag that controls if Rayleigh friction will be used in the simulation. \\
\hline
- real \hyperref[subsec:nm_sec_config_Rayleigh_damping_coeff]{config\_Rayleigh\_damping\_coeff} & 0.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_Rayleigh_damping_coeff]{config\_Rayleigh\_damping\_coeff} & Value of the Rayleigh friction coefficient. \\
\hline
\end{longtable}
\end{center}
@@ -222,15 +222,15 @@
\label{sec:nm_tab_vmix}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_implicit_vertical_mix]{config\_implicit\_vertical\_mix} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_implicit_vertical_mix]{config\_implicit\_vertical\_mix} & {\bf \color{red} DEPRECATED} \\
\hline
- real \hyperref[subsec:nm_sec_config_convective_visc]{config\_convective\_visc} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_convective_visc]{config\_convective\_visc} & Value of coefficient for convective vertical mixing of momentum. \\
\hline
- real \hyperref[subsec:nm_sec_config_convective_diff]{config\_convective\_diff} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_convective_diff]{config\_convective\_diff} & Value of coefficient for convective vertical mixing of tracers. \\
\hline
\end{longtable}
\end{center}
@@ -239,17 +239,17 @@
\label{sec:nm_tab_vmix_const}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_const_visc]{config\_use\_const\_visc} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_const_visc]{config\_use\_const\_visc} & Flag that controls if constant vertical mixing of momentum is used. \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_const_diff]{config\_use\_const\_diff} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_const_diff]{config\_use\_const\_diff} & Flag that controls if constant vertical mixing of tracers is used. \\
\hline
- real \hyperref[subsec:nm_sec_config_vert_visc]{config\_vert\_visc} & 2.5e-4 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vert_visc]{config\_vert\_visc} & Value of coefficient for constant vertical mixing of momentum. \\
\hline
- real \hyperref[subsec:nm_sec_config_vert_diff]{config\_vert\_diff} & 2.5e-5 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vert_diff]{config\_vert\_diff} & Value of coefficient for constant vertical mixing of tracers. \\
\hline
\end{longtable}
\end{center}
@@ -258,19 +258,19 @@
\label{sec:nm_tab_vmix_rich}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_rich_visc]{config\_use\_rich\_visc} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_rich_visc]{config\_use\_rich\_visc} & Flag that controls if Richarson number vertical mixing of momentum is used. \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_rich_diff]{config\_use\_rich\_diff} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_rich_diff]{config\_use\_rich\_diff} & Flag that controls if Richarson number vertical mixing of tracers is used. \\
\hline
- real \hyperref[subsec:nm_sec_config_bkrd_vert_visc]{config\_bkrd\_vert\_visc} & 1.0e-4 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_bkrd_vert_visc]{config\_bkrd\_vert\_visc} & Value of coefficient for Richardson number vertical mixing of momentum. \\
\hline
- real \hyperref[subsec:nm_sec_config_bkrd_vert_diff]{config\_bkrd\_vert\_diff} & 1.0e-5 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_bkrd_vert_diff]{config\_bkrd\_vert\_diff} & Value of coefficient for Richardson number vertical mixing of tracers. \\
\hline
- real \hyperref[subsec:nm_sec_config_rich_mix]{config\_rich\_mix} & 0.005 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_rich_mix]{config\_rich\_mix} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -279,25 +279,25 @@
\label{sec:nm_tab_vmix_tanh}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_tanh_visc]{config\_use\_tanh\_visc} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_tanh_visc]{config\_use\_tanh\_visc} & Flag that controls if hyperbolic tangent vertical mixing of momentum is used. \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_tanh_diff]{config\_use\_tanh\_diff} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_tanh_diff]{config\_use\_tanh\_diff} & Flag that controls if hyperbolic tangent vertical mixing of tracers is used. \\
\hline
- real \hyperref[subsec:nm_sec_config_max_visc_tanh]{config\_max\_visc\_tanh} & 2.5e-1 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_max_visc_tanh]{config\_max\_visc\_tanh} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_min_visc_tanh]{config\_min\_visc\_tanh} & 1.0e-4 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_min_visc_tanh]{config\_min\_visc\_tanh} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_max_diff_tanh]{config\_max\_diff\_tanh} & 2.5e-2 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_max_diff_tanh]{config\_max\_diff\_tanh} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_min_diff_tanh]{config\_min\_diff\_tanh} & 1.0e-5 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_min_diff_tanh]{config\_min\_diff\_tanh} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_zMid_tanh]{config\_zMid\_tanh} & -100 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_zMid_tanh]{config\_zMid\_tanh} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_zWidth_tanh]{config\_zWidth\_tanh} & 100 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_zWidth_tanh]{config\_zWidth\_tanh} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -306,17 +306,17 @@
\label{sec:nm_tab_forcing}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_use_monthly_forcing]{config\_use\_monthly\_forcing} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_use_monthly_forcing]{config\_use\_monthly\_forcing} & Flag that controls if monthly forcing is used in the simulation. \\
\hline
- logical \hyperref[subsec:nm_sec_config_restoreTS]{config\_restoreTS} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_restoreTS]{config\_restoreTS} & Flag that controls is temperature and salinity restoring is used in the simulation. \\
\hline
- real \hyperref[subsec:nm_sec_config_restoreT_timescale]{config\_restoreT\_timescale} & 90.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_restoreT_timescale]{config\_restoreT\_timescale} & Value in days of the restoring timescale for temperature. \\
\hline
- real \hyperref[subsec:nm_sec_config_restoreS_timescale]{config\_restoreS\_timescale} & 90.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_restoreS_timescale]{config\_restoreS\_timescale} & Value in days of the restoring timescale for salinity. \\
\hline
\end{longtable}
\end{center}
@@ -325,19 +325,19 @@
\label{sec:nm_tab_advection}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- string \hyperref[subsec:nm_sec_config_vert_tracer_adv]{config\_vert\_tracer\_adv} & 'stencil' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vert_tracer_adv]{config\_vert\_tracer\_adv} & {\bf \color{red} DEPRECATED} \\
\hline
- integer \hyperref[subsec:nm_sec_config_vert_tracer_adv_order]{config\_vert\_tracer\_adv\_order} & 3 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_vert_tracer_adv_order]{config\_vert\_tracer\_adv\_order} & Order of vertical reconstruction of tracers used for vertical advection. \\
\hline
- integer \hyperref[subsec:nm_sec_config_horiz_tracer_adv_order]{config\_horiz\_tracer\_adv\_order} & 3 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_horiz_tracer_adv_order]{config\_horiz\_tracer\_adv\_order} & Order of horizontal reconstruction of tracers used for horizontal advection. \\
\hline
- real \hyperref[subsec:nm_sec_config_coef_3rd_order]{config\_coef\_3rd\_order} & 0.25 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_coef_3rd_order]{config\_coef\_3rd\_order} & Blending coefficient for 3rd and 4th order horizontal reconstruction of tracers. \\
\hline
- logical \hyperref[subsec:nm_sec_config_monotonic]{config\_monotonic} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_monotonic]{config\_monotonic} & Flag that controls if monotonic advection is used in the simulation. \\
\hline
\end{longtable}
\end{center}
@@ -346,11 +346,11 @@
\label{sec:nm_tab_bottom_drag}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- real \hyperref[subsec:nm_sec_config_bottom_drag_coeff]{config\_bottom\_drag\_coeff} & 1.0e-3 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_bottom_drag_coeff]{config\_bottom\_drag\_coeff} & Value of the bottom drag coefficient. \\
\hline
\end{longtable}
\end{center}
@@ -359,13 +359,13 @@
\label{sec:nm_tab_pressure_gradient}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- string \hyperref[subsec:nm_sec_config_pressure_gradient_type]{config\_pressure\_gradient\_type} & 'pressure\_and\_zmid' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_pressure_gradient_type]{config\_pressure\_gradient\_type} & String that defines the type of pressure gradient used in the simulation. \\
\hline
- real \hyperref[subsec:nm_sec_config_rho0]{config\_rho0} & 1014.65 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_rho0]{config\_rho0} & Value of the reference density for the Boussineq approximation. \\
\hline
\end{longtable}
\end{center}
@@ -374,11 +374,11 @@
\label{sec:nm_tab_eos}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- string \hyperref[subsec:nm_sec_config_eos_type]{config\_eos\_type} & 'jm' & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_eos_type]{config\_eos\_type} & String that defines the equation of state used in the simulation. \\
\hline
\end{longtable}
\end{center}
@@ -387,19 +387,19 @@
\label{sec:nm_tab_eos_linear}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- real \hyperref[subsec:nm_sec_config_eos_linear_alpha]{config\_eos\_linear\_alpha} & 2.55e-1 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_eos_linear_alpha]{config\_eos\_linear\_alpha} & Value of temperature expansion coefficient used in the linear equation of state. \\
\hline
- real \hyperref[subsec:nm_sec_config_eos_linear_beta]{config\_eos\_linear\_beta} & 7.64e-1 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_eos_linear_beta]{config\_eos\_linear\_beta} & Value of salinity expansion coefficient used in the linear equation of state. \\
\hline
- real \hyperref[subsec:nm_sec_config_eos_linear_Tref]{config\_eos\_linear\_Tref} & 19.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_eos_linear_Tref]{config\_eos\_linear\_Tref} & Value of the reference temperature used in the linear equation of state. \\
\hline
- real \hyperref[subsec:nm_sec_config_eos_linear_Sref]{config\_eos\_linear\_Sref} & 35.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_eos_linear_Sref]{config\_eos\_linear\_Sref} & Value of the reference salinity used in the linear equation of state. \\
\hline
- real \hyperref[subsec:nm_sec_config_eos_linear_rhoref]{config\_eos\_linear\_rhoref} & 1025.022 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_eos_linear_rhoref]{config\_eos\_linear\_rhoref} & Value of the reference density used in the linear equation of state. \\
\hline
\end{longtable}
\end{center}
@@ -408,33 +408,33 @@
\label{sec:nm_tab_split_explicit_ts}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- integer \hyperref[subsec:nm_sec_config_n_ts_iter]{config\_n\_ts\_iter} & 2 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_n_ts_iter]{config\_n\_ts\_iter} & {\bf \color{red} DEFINE} \\
\hline
- integer \hyperref[subsec:nm_sec_config_n_bcl_iter_beg]{config\_n\_bcl\_iter\_beg} & 1 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_n_bcl_iter_beg]{config\_n\_bcl\_iter\_beg} & {\bf \color{red} DEFINE} \\
\hline
- integer \hyperref[subsec:nm_sec_config_n_bcl_iter_mid]{config\_n\_bcl\_iter\_mid} & 2 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_n_bcl_iter_mid]{config\_n\_bcl\_iter\_mid} & {\bf \color{red} DEFINE} \\
\hline
- integer \hyperref[subsec:nm_sec_config_n_bcl_iter_end]{config\_n\_bcl\_iter\_end} & 2 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_n_bcl_iter_end]{config\_n\_bcl\_iter\_end} & {\bf \color{red} DEFINE} \\
\hline
- integer \hyperref[subsec:nm_sec_config_n_btr_subcycles]{config\_n\_btr\_subcycles} & 20 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_n_btr_subcycles]{config\_n\_btr\_subcycles} & {\bf \color{red} DEFINE} \\
\hline
- integer \hyperref[subsec:nm_sec_config_n_btr_cor_iter]{config\_n\_btr\_cor\_iter} & 2 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_n_btr_cor_iter]{config\_n\_btr\_cor\_iter} & {\bf \color{red} DEFINE} \\
\hline
- logical \hyperref[subsec:nm_sec_config_u_correction]{config\_u\_correction} & .true. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_u_correction]{config\_u\_correction} & {\bf \color{red} DEFINE} \\
\hline
- integer \hyperref[subsec:nm_sec_config_btr_subcycle_loop_factor]{config\_btr\_subcycle\_loop\_factor} & 2 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_btr_subcycle_loop_factor]{config\_btr\_subcycle\_loop\_factor} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_btr_gam1_uWt1]{config\_btr\_gam1\_uWt1} & 0.5 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_btr_gam1_uWt1]{config\_btr\_gam1\_uWt1} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_btr_gam2_SSHWt1]{config\_btr\_gam2\_SSHWt1} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_btr_gam2_SSHWt1]{config\_btr\_gam2\_SSHWt1} & {\bf \color{red} DEFINE} \\
\hline
- real \hyperref[subsec:nm_sec_config_btr_gam3_uWt2]{config\_btr\_gam3\_uWt2} & 1.0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_btr_gam3_uWt2]{config\_btr\_gam3\_uWt2} & {\bf \color{red} DEFINE} \\
\hline
- logical \hyperref[subsec:nm_sec_config_btr_solve_SSH2]{config\_btr\_solve\_SSH2} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_btr_solve_SSH2]{config\_btr\_solve\_SSH2} & {\bf \color{red} DEFINE} \\
\hline
\end{longtable}
\end{center}
@@ -443,11 +443,11 @@
\label{sec:nm_tab_sw_model}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- integer \hyperref[subsec:nm_sec_config_test_case]{config\_test\_case} & 0 & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_test_case]{config\_test\_case} & {\bf \color{red} MISSING} \\
\hline
\end{longtable}
\end{center}
@@ -456,49 +456,49 @@
\label{sec:nm_tab_debug}
{\small
\begin{center}
-\begin{longtable}{| c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Name & Default Value & Possible Values \\
+ Name & Description \\
\hline
- logical \hyperref[subsec:nm_sec_config_check_zlevel_consistency]{config\_check\_zlevel\_consistency} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_check_zlevel_consistency]{config\_check\_zlevel\_consistency} & Flag that enables a zlevel consistency check on initialization. \\
\hline
- logical \hyperref[subsec:nm_sec_config_filter_btr_mode]{config\_filter\_btr\_mode} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_filter_btr_mode]{config\_filter\_btr\_mode} & Flag that enables the filtering of the barotropic mode. \\
\hline
- logical \hyperref[subsec:nm_sec_config_prescribe_velocity]{config\_prescribe\_velocity} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_prescribe_velocity]{config\_prescribe\_velocity} & Flag that enables prescribed velocities, read from the input file, that remain constant throughout the simulation. \\
\hline
- logical \hyperref[subsec:nm_sec_config_prescribe_thickness]{config\_prescribe\_thickness} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_prescribe_thickness]{config\_prescribe\_thickness} & {\bf \color{red} MISSING} \\
\hline
- logical \hyperref[subsec:nm_sec_config_include_KE_vertex]{config\_include\_KE\_vertex} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_include_KE_vertex]{config\_include\_KE\_vertex} & {\bf \color{red} DEFINE} \\
\hline
- logical \hyperref[subsec:nm_sec_config_check_tracer_monotonicity]{config\_check\_tracer\_monotonicity} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_check_tracer_monotonicity]{config\_check\_tracer\_monotonicity} & Flag that enables the check for monotonicity of tracers. Only available if config\_monotoic is true. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_h_all_tend]{config\_disable\_h\_all\_tend} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_h_all_tend]{config\_disable\_h\_all\_tend} & Flag that disables all thickness tendencies. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_h_hadv]{config\_disable\_h\_hadv} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_h_hadv]{config\_disable\_h\_hadv} & Flag that disables horizontal advection of thickness. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_h_vadv]{config\_disable\_h\_vadv} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_h_vadv]{config\_disable\_h\_vadv} & Flag that disables vertical advection of thickness. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_all_tend]{config\_disable\_u\_all\_tend} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_all_tend]{config\_disable\_u\_all\_tend} & Flag that disables all velocitiy tendencies. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_coriolis]{config\_disable\_u\_coriolis} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_coriolis]{config\_disable\_u\_coriolis} & Flag that disables Coriolis tendencies of velocity. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_pgrad]{config\_disable\_u\_pgrad} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_pgrad]{config\_disable\_u\_pgrad} & Flag that disables pressure gradient tendencies of velocity. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_hmix]{config\_disable\_u\_hmix} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_hmix]{config\_disable\_u\_hmix} & Flag that disables horizontal mixing tendencies of velocity. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_windstress]{config\_disable\_u\_windstress} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_windstress]{config\_disable\_u\_windstress} & Flag that disables windstress tendencies of velocity. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_vmix]{config\_disable\_u\_vmix} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_vmix]{config\_disable\_u\_vmix} & Flag that disables vertical mixing of velocity. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_u_vadv]{config\_disable\_u\_vadv} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_u_vadv]{config\_disable\_u\_vadv} & Flag that disables vertical advection tendencies of velocity. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_tr_all_tend]{config\_disable\_tr\_all\_tend} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_tr_all_tend]{config\_disable\_tr\_all\_tend} & Flag that disables all tracer tendencies. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_tr_adv]{config\_disable\_tr\_adv} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_tr_adv]{config\_disable\_tr\_adv} & Flag that disables advection tendencites of tracers. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_tr_hmix]{config\_disable\_tr\_hmix} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_tr_hmix]{config\_disable\_tr\_hmix} & Flag that disables horizontal mixing tendencites of tracers. \\
\hline
- logical \hyperref[subsec:nm_sec_config_disable_tr_vmix]{config\_disable\_tr\_vmix} & .false. & {\bf \color{red} MISSING} \\
+ \hyperref[subsec:nm_sec_config_disable_tr_vmix]{config\_disable\_tr\_vmix} & Flag taht disables vertical mixing of tracers. \\
\hline
\end{longtable}
\end{center}
Modified: trunk/documents/users_guide/ocn/variable_section_documentation.tex
===================================================================
--- trunk/documents/users_guide/ocn/variable_section_documentation.tex 2013-02-25 17:21:52 UTC (rev 2506)
+++ trunk/documents/users_guide/ocn/variable_section_documentation.tex 2013-02-25 18:22:07 UTC (rev 2507)
@@ -3,1657 +3,2647 @@
\label{sec:var_sec_state}
\subsection{xtime}
\label{subsec:var_sec_state_xtime}
-\begin{itemize}
- \item Type: string
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & string \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{xtime: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{u}
\label{subsec:var_sec_state_u}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{u: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{h}
\label{subsec:var_sec_state_h}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{h: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{rho}
\label{subsec:var_sec_state_rho}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{rho: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{temperature}
\label{subsec:var_sec_state_temperature}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{temperature: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{salinity}
\label{subsec:var_sec_state_salinity}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{salinity: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{tracer1}
\label{subsec:var_sec_state_tracer1}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tracer1: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBtr}
\label{subsec:var_sec_state_uBtr}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges Time
- \item Persistence: persistent
- \item IO: Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBtr: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{ssh}
\label{subsec:var_sec_state_ssh}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{ssh: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBtrSubcycle}
\label{subsec:var_sec_state_uBtrSubcycle}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBtrSubcycle: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{sshSubcycle}
\label{subsec:var_sec_state_sshSubcycle}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{sshSubcycle: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{FBtr}
\label{subsec:var_sec_state_FBtr}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{FBtr: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{GBtrForcing}
\label{subsec:var_sec_state_GBtrForcing}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{GBtrForcing: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBcl}
\label{subsec:var_sec_state_uBcl}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBcl: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{zMid}
\label{subsec:var_sec_state_zMid}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{zMid: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{v}
\label{subsec:var_sec_state_v}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{v: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uTransport}
\label{subsec:var_sec_state_uTransport}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uTransport: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBolusGM}
\label{subsec:var_sec_state_uBolusGM}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBolusGM: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBolusGMX}
\label{subsec:var_sec_state_uBolusGMX}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBolusGMX: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBolusGMY}
\label{subsec:var_sec_state_uBolusGMY}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBolusGMY: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBolusGMZ}
\label{subsec:var_sec_state_uBolusGMZ}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBolusGMZ: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBolusGMZonal}
\label{subsec:var_sec_state_uBolusGMZonal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBolusGMZonal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uBolusGMMeridional}
\label{subsec:var_sec_state_uBolusGMMeridional}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uBolusGMMeridional: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{hEddyFlux}
\label{subsec:var_sec_state_hEddyFlux}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{hEddyFlux: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{h\_kappa}
\label{subsec:var_sec_state_h_kappa}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{h\_kappa: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{h\_kappa\_q}
\label{subsec:var_sec_state_h_kappa_q}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{h\_kappa\_q: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{divergence}
\label{subsec:var_sec_state_divergence}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{divergence: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vorticity}
\label{subsec:var_sec_state_vorticity}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vorticity: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{Vor\_edge}
\label{subsec:var_sec_state_Vor_edge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{Vor\_edge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{h\_edge}
\label{subsec:var_sec_state_h_edge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{h\_edge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{h\_vertex}
\label{subsec:var_sec_state_h_vertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{h\_vertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{ke}
\label{subsec:var_sec_state_ke}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{ke: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{kev}
\label{subsec:var_sec_state_kev}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{kev: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{kevc}
\label{subsec:var_sec_state_kevc}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{kevc: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{ke\_edge}
\label{subsec:var_sec_state_ke_edge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{ke\_edge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{Vor\_vertex}
\label{subsec:var_sec_state_Vor_vertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{Vor\_vertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{Vor\_cell}
\label{subsec:var_sec_state_Vor_cell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{Vor\_cell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uReconstructX}
\label{subsec:var_sec_state_uReconstructX}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uReconstructX: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uReconstructY}
\label{subsec:var_sec_state_uReconstructY}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uReconstructY: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uReconstructZ}
\label{subsec:var_sec_state_uReconstructZ}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uReconstructZ: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uReconstructZonal}
\label{subsec:var_sec_state_uReconstructZonal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uReconstructZonal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uReconstructMeridional}
\label{subsec:var_sec_state_uReconstructMeridional}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uReconstructMeridional: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uSrcReconstructX}
\label{subsec:var_sec_state_uSrcReconstructX}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uSrcReconstructX: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uSrcReconstructY}
\label{subsec:var_sec_state_uSrcReconstructY}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uSrcReconstructY: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uSrcReconstructZ}
\label{subsec:var_sec_state_uSrcReconstructZ}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uSrcReconstructZ: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uSrcReconstructZonal}
\label{subsec:var_sec_state_uSrcReconstructZonal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uSrcReconstructZonal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{uSrcReconstructMeridional}
\label{subsec:var_sec_state_uSrcReconstructMeridional}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{uSrcReconstructMeridional: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{MontPot}
\label{subsec:var_sec_state_MontPot}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{MontPot: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{pressure}
\label{subsec:var_sec_state_pressure}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{pressure: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{wTop}
\label{subsec:var_sec_state_wTop}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{wTop: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vertVelocityTop}
\label{subsec:var_sec_state_vertVelocityTop}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vertVelocityTop: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{rhoDisplaced}
\label{subsec:var_sec_state_rhoDisplaced}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{rhoDisplaced: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{BruntVaisalaFreqTop}
\label{subsec:var_sec_state_BruntVaisalaFreqTop}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{BruntVaisalaFreqTop: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{viscosity}
\label{subsec:var_sec_state_viscosity}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{viscosity: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vh}
\label{subsec:var_sec_state_vh}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vh: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{circulation}
\label{subsec:var_sec_state_circulation}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{circulation: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{gradVor\_t}
\label{subsec:var_sec_state_gradVor_t}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{gradVor\_t: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{gradVor\_n}
\label{subsec:var_sec_state_gradVor_n}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{gradVor\_n: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{areaCellGlobal}
\label{subsec:var_sec_state_areaCellGlobal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{areaCellGlobal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{areaEdgeGlobal}
\label{subsec:var_sec_state_areaEdgeGlobal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{areaEdgeGlobal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{areaTriangleGlobal}
\label{subsec:var_sec_state_areaTriangleGlobal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{areaTriangleGlobal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{volumeCellGlobal}
\label{subsec:var_sec_state_volumeCellGlobal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{volumeCellGlobal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{volumeEdgeGlobal}
\label{subsec:var_sec_state_volumeEdgeGlobal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{volumeEdgeGlobal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{CFLNumberGlobal}
\label{subsec:var_sec_state_CFLNumberGlobal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{CFLNumberGlobal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{nAccumulate}
\label{subsec:var_sec_state_nAccumulate}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{nAccumulate: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_ssh}
\label{subsec:var_sec_state_acc_ssh}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_ssh: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_sshVar}
\label{subsec:var_sec_state_acc_sshVar}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_sshVar: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_uReconstructZonal}
\label{subsec:var_sec_state_acc_uReconstructZonal}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_uReconstructZonal: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_uReconstructMeridional}
\label{subsec:var_sec_state_acc_uReconstructMeridional}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_uReconstructMeridional: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_uReconstructZonalVar}
\label{subsec:var_sec_state_acc_uReconstructZonalVar}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_uReconstructZonalVar: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_uReconstructMeridionalVar}
\label{subsec:var_sec_state_acc_uReconstructMeridionalVar}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_uReconstructMeridionalVar: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_u}
\label{subsec:var_sec_state_acc_u}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_u: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_uVar}
\label{subsec:var_sec_state_acc_uVar}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_uVar: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{acc\_vertVelocityTop}
\label{subsec:var_sec_state_acc_vertVelocityTop}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nCells Time
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{acc\_vertVelocityTop: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\section{mesh}
\label{sec:var_sec_mesh}
\subsection{latCell}
\label{subsec:var_sec_mesh_latCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{latCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{lonCell}
\label{subsec:var_sec_mesh_lonCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{lonCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{xCell}
\label{subsec:var_sec_mesh_xCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{xCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{yCell}
\label{subsec:var_sec_mesh_yCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{yCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{zCell}
\label{subsec:var_sec_mesh_zCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{zCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{indexToCellID}
\label{subsec:var_sec_mesh_indexToCellID}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{indexToCellID: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{latEdge}
\label{subsec:var_sec_mesh_latEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{latEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{lonEdge}
\label{subsec:var_sec_mesh_lonEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{lonEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{xEdge}
\label{subsec:var_sec_mesh_xEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{xEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{yEdge}
\label{subsec:var_sec_mesh_yEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{yEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{zEdge}
\label{subsec:var_sec_mesh_zEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{zEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{indexToEdgeID}
\label{subsec:var_sec_mesh_indexToEdgeID}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{indexToEdgeID: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{latVertex}
\label{subsec:var_sec_mesh_latVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{latVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{lonVertex}
\label{subsec:var_sec_mesh_lonVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{lonVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{xVertex}
\label{subsec:var_sec_mesh_xVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{xVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{yVertex}
\label{subsec:var_sec_mesh_yVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{yVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{zVertex}
\label{subsec:var_sec_mesh_zVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{zVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{indexToVertexID}
\label{subsec:var_sec_mesh_indexToVertexID}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{indexToVertexID: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{meshDensity}
\label{subsec:var_sec_mesh_meshDensity}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{meshDensity: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{meshScalingDel2}
\label{subsec:var_sec_mesh_meshScalingDel2}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{meshScalingDel2: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{meshScalingDel4}
\label{subsec:var_sec_mesh_meshScalingDel4}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{meshScalingDel4: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{meshScaling}
\label{subsec:var_sec_mesh_meshScaling}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{meshScaling: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{cellsOnEdge}
\label{subsec:var_sec_mesh_cellsOnEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: TWO nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( TWO nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{cellsOnEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{nEdgesOnCell}
\label{subsec:var_sec_mesh_nEdgesOnCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{nEdgesOnCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{nEdgesOnEdge}
\label{subsec:var_sec_mesh_nEdgesOnEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{nEdgesOnEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgesOnCell}
\label{subsec:var_sec_mesh_edgesOnCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgesOnCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgesOnEdge}
\label{subsec:var_sec_mesh_edgesOnEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges2 nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges2 nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgesOnEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{weightsOnEdge}
\label{subsec:var_sec_mesh_weightsOnEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges2 nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges2 nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{weightsOnEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{dvEdge}
\label{subsec:var_sec_mesh_dvEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{dvEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{dcEdge}
\label{subsec:var_sec_mesh_dcEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{dcEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{angleEdge}
\label{subsec:var_sec_mesh_angleEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{angleEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{areaCell}
\label{subsec:var_sec_mesh_areaCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{areaCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{areaTriangle}
\label{subsec:var_sec_mesh_areaTriangle}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{areaTriangle: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgeNormalVectors}
\label{subsec:var_sec_mesh_edgeNormalVectors}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: R3 nEdges
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( R3 nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgeNormalVectors: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{localVerticalUnitVectors}
\label{subsec:var_sec_mesh_localVerticalUnitVectors}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: R3 nCells
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( R3 nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{localVerticalUnitVectors: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{cellTangentPlane}
\label{subsec:var_sec_mesh_cellTangentPlane}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: R3 TWO nEdges
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( R3 TWO nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{cellTangentPlane: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{cellsOnCell}
\label{subsec:var_sec_mesh_cellsOnCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{cellsOnCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{verticesOnCell}
\label{subsec:var_sec_mesh_verticesOnCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{verticesOnCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{verticesOnEdge}
\label{subsec:var_sec_mesh_verticesOnEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: TWO nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( TWO nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{verticesOnEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgesOnVertex}
\label{subsec:var_sec_mesh_edgesOnVertex}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: vertexDegree nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( vertexDegree nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgesOnVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{cellsOnVertex}
\label{subsec:var_sec_mesh_cellsOnVertex}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: vertexDegree nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( vertexDegree nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{cellsOnVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{kiteAreasOnVertex}
\label{subsec:var_sec_mesh_kiteAreasOnVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: vertexDegree nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( vertexDegree nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{kiteAreasOnVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{fEdge}
\label{subsec:var_sec_mesh_fEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{fEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{fVertex}
\label{subsec:var_sec_mesh_fVertex}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{fVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{bottomDepth}
\label{subsec:var_sec_mesh_bottomDepth}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{bottomDepth: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{deriv\_two}
\label{subsec:var_sec_mesh_deriv_two}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges2 TWO nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges2 TWO nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{deriv\_two: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{adv\_coefs}
\label{subsec:var_sec_mesh_adv_coefs}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nAdvectionCells nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nAdvectionCells nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{adv\_coefs: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{adv\_coefs\_2nd}
\label{subsec:var_sec_mesh_adv_coefs_2nd}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nAdvectionCells nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nAdvectionCells nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{adv\_coefs\_2nd: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{adv\_coefs\_3rd}
\label{subsec:var_sec_mesh_adv_coefs_3rd}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nAdvectionCells nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nAdvectionCells nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{adv\_coefs\_3rd: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{advCellsForEdge}
\label{subsec:var_sec_mesh_advCellsForEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nAdvectionCells nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nAdvectionCells nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{advCellsForEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{nAdvCellsForEdge}
\label{subsec:var_sec_mesh_nAdvCellsForEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{nAdvCellsForEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{highOrderAdvectionMask}
\label{subsec:var_sec_mesh_highOrderAdvectionMask}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{highOrderAdvectionMask: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{lowOrderAdvectionMask}
\label{subsec:var_sec_mesh_lowOrderAdvectionMask}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{lowOrderAdvectionMask: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{defc\_a}
\label{subsec:var_sec_mesh_defc_a}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{defc\_a: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{defc\_b}
\label{subsec:var_sec_mesh_defc_b}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{defc\_b: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{kdiff}
\label{subsec:var_sec_mesh_kdiff}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{kdiff: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{coeffs\_reconstruct}
\label{subsec:var_sec_mesh_coeffs_reconstruct}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: R3 maxEdges nCells
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( R3 maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{coeffs\_reconstruct: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{maxLevelCell}
\label{subsec:var_sec_mesh_maxLevelCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{maxLevelCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{maxLevelEdgeTop}
\label{subsec:var_sec_mesh_maxLevelEdgeTop}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{maxLevelEdgeTop: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{maxLevelEdgeBot}
\label{subsec:var_sec_mesh_maxLevelEdgeBot}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{maxLevelEdgeBot: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{maxLevelVertexTop}
\label{subsec:var_sec_mesh_maxLevelVertexTop}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{maxLevelVertexTop: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{maxLevelVertexBot}
\label{subsec:var_sec_mesh_maxLevelVertexBot}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertices
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{maxLevelVertexBot: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{refBottomDepth}
\label{subsec:var_sec_mesh_refBottomDepth}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{refBottomDepth: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{refBottomDepthTopOfCell}
\label{subsec:var_sec_mesh_refBottomDepthTopOfCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{refBottomDepthTopOfCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{hZLevel}
\label{subsec:var_sec_mesh_hZLevel}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{hZLevel: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vertCoordMovementWeights}
\label{subsec:var_sec_mesh_vertCoordMovementWeights}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels
- \item Persistence: persistent
- \item IO: Input/Restart/Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vertCoordMovementWeights: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{boundaryEdge}
\label{subsec:var_sec_mesh_boundaryEdge}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{boundaryEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{boundaryVertex}
\label{subsec:var_sec_mesh_boundaryVertex}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{boundaryVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{boundaryCell}
\label{subsec:var_sec_mesh_boundaryCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{boundaryCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgeMask}
\label{subsec:var_sec_mesh_edgeMask}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgeMask: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vertexMask}
\label{subsec:var_sec_mesh_vertexMask}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nVertices
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vertexMask: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{cellMask}
\label{subsec:var_sec_mesh_cellMask}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells
- \item Persistence: persistent
- \item IO: Output
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{cellMask: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{u\_src}
\label{subsec:var_sec_mesh_u_src}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{u\_src: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{temperatureRestore}
\label{subsec:var_sec_mesh_temperatureRestore}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{temperatureRestore: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{salinityRestore}
\label{subsec:var_sec_mesh_salinityRestore}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{salinityRestore: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{windStressMonthly}
\label{subsec:var_sec_mesh_windStressMonthly}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nMonths nEdges
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nMonths nEdges ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{windStressMonthly: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{temperatureRestoreMonthly}
\label{subsec:var_sec_mesh_temperatureRestoreMonthly}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nMonths nCells
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nMonths nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{temperatureRestoreMonthly: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{salinityRestoreMonthly}
\label{subsec:var_sec_mesh_salinityRestoreMonthly}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nMonths nCells
- \item Persistence: persistent
- \item IO: Input/Restart
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nMonths nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{salinityRestoreMonthly: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgeSignOnCell}
\label{subsec:var_sec_mesh_edgeSignOnCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgeSignOnCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{edgeSignOnVertex}
\label{subsec:var_sec_mesh_edgeSignOnVertex}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nVertices
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nVertices ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{edgeSignOnVertex: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{kiteIndexOnCell}
\label{subsec:var_sec_mesh_kiteIndexOnCell}
-\begin{itemize}
- \item Type: integer
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: maxEdges nCells
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & integer \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( maxEdges nCells ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{kiteIndexOnCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\section{tend}
\label{sec:var_sec_tend}
\subsection{tend\_u}
\label{subsec:var_sec_tend_tend_u}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tend\_u: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{tend\_h}
\label{subsec:var_sec_tend_tend_h}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tend\_h: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{tend\_ssh}
\label{subsec:var_sec_tend_tend_ssh}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tend\_ssh: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{tend\_temperature}
\label{subsec:var_sec_tend_tend_temperature}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tend\_temperature: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{tend\_salinity}
\label{subsec:var_sec_tend_tend_salinity}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tend\_salinity: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{tend\_tracer1}
\label{subsec:var_sec_tend_tend_tracer1}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevels nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevels nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{tend\_tracer1: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\section{diagnostics}
\label{sec:var_sec_diagnostics}
\subsection{RiTopOfCell}
\label{subsec:var_sec_diagnostics_RiTopOfCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{RiTopOfCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{RiTopOfEdge}
\label{subsec:var_sec_diagnostics_RiTopOfEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{RiTopOfEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vertViscTopOfEdge}
\label{subsec:var_sec_diagnostics_vertViscTopOfEdge}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nEdges Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nEdges Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vertViscTopOfEdge: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
\subsection{vertDiffTopOfCell}
\label{subsec:var_sec_diagnostics_vertDiffTopOfCell}
-\begin{itemize}
- \item Type: real
- \item Units: {\bf \color{red} MISSING}
- \item Dimensions: nVertLevelsP1 nCells Time
- \item Persistence: persistent
- \item IO: None
- \item Description: {\bf \color{red} MISSING}
-\end{itemize}
+\begin{center}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
+ \hline
+ Type: & real \\
+ \hline
+ Units: & {\bf \color{red} MISSING} \\
+ \hline
+ Dimension: & ( nVertLevelsP1 nCells Time ) \\
+ \hline
+ Persistence: & persistent \\
+ \hline
+ \caption{vertDiffTopOfCell: {\bf \color{red} MISSING}}
+\end{longtable}
+\end{center}
Modified: trunk/documents/users_guide/ocn/variable_table_documentation.tex
===================================================================
--- trunk/documents/users_guide/ocn/variable_table_documentation.tex 2013-02-25 17:21:52 UTC (rev 2506)
+++ trunk/documents/users_guide/ocn/variable_table_documentation.tex 2013-02-25 18:22:07 UTC (rev 2507)
@@ -3,157 +3,157 @@
\label{sec:var_tab_state}
{\small
\begin{center}
-\begin{longtable}{| c | c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Persistence Name ( Dimensions ) & I/O & Units & Super Array \\
+ Name & Description \\
\hline
- string persistent \hyperref[subsec:var_sec_state_xtime]{xtime} ( Time ) & Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_xtime]{xtime} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_u]{u} ( nVertLevels nEdges Time ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_u]{u} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_h]{h} ( nVertLevels nCells Time ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_h]{h} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_rho]{rho} ( nVertLevels nCells Time ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_rho]{rho} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_temperature]{temperature} ( nVertLevels nCells Time ) & Input/Restart/Output & {\bf \color{red} MISSING} & tracers \\
+ \hyperref[subsec:var_sec_state_temperature]{temperature} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_salinity]{salinity} ( nVertLevels nCells Time ) & Input/Restart/Output & {\bf \color{red} MISSING} & tracers \\
+ \hyperref[subsec:var_sec_state_salinity]{salinity} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_tracer1]{tracer1} ( nVertLevels nCells Time ) & Input/Restart/Output & {\bf \color{red} MISSING} & tracers \\
+ \hyperref[subsec:var_sec_state_tracer1]{tracer1} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBtr]{uBtr} ( nEdges Time ) & Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBtr]{uBtr} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_ssh]{ssh} ( nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_ssh]{ssh} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBtrSubcycle]{uBtrSubcycle} ( nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBtrSubcycle]{uBtrSubcycle} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_sshSubcycle]{sshSubcycle} ( nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_sshSubcycle]{sshSubcycle} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_FBtr]{FBtr} ( nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_FBtr]{FBtr} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_GBtrForcing]{GBtrForcing} ( nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_GBtrForcing]{GBtrForcing} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBcl]{uBcl} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBcl]{uBcl} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_zMid]{zMid} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_zMid]{zMid} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_v]{v} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_v]{v} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uTransport]{uTransport} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uTransport]{uTransport} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBolusGM]{uBolusGM} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBolusGM]{uBolusGM} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBolusGMX]{uBolusGMX} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBolusGMX]{uBolusGMX} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBolusGMY]{uBolusGMY} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBolusGMY]{uBolusGMY} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBolusGMZ]{uBolusGMZ} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBolusGMZ]{uBolusGMZ} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBolusGMZonal]{uBolusGMZonal} ( nVertLevels nEdges Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBolusGMZonal]{uBolusGMZonal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uBolusGMMeridional]{uBolusGMMeridional} ( nVertLevels nEdges Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uBolusGMMeridional]{uBolusGMMeridional} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_hEddyFlux]{hEddyFlux} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_hEddyFlux]{hEddyFlux} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_h_kappa]{h\_kappa} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_h_kappa]{h\_kappa} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_h_kappa_q]{h\_kappa\_q} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_h_kappa_q]{h\_kappa\_q} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_divergence]{divergence} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_divergence]{divergence} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_vorticity]{vorticity} ( nVertLevels nVertices Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_vorticity]{vorticity} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_Vor_edge]{Vor\_edge} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_Vor_edge]{Vor\_edge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_h_edge]{h\_edge} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_h_edge]{h\_edge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_h_vertex]{h\_vertex} ( nVertLevels nVertices Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_h_vertex]{h\_vertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_ke]{ke} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_ke]{ke} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_kev]{kev} ( nVertLevels nVertices Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_kev]{kev} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_kevc]{kevc} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_kevc]{kevc} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_ke_edge]{ke\_edge} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_ke_edge]{ke\_edge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_Vor_vertex]{Vor\_vertex} ( nVertLevels nVertices Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_Vor_vertex]{Vor\_vertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_Vor_cell]{Vor\_cell} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_Vor_cell]{Vor\_cell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uReconstructX]{uReconstructX} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uReconstructX]{uReconstructX} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uReconstructY]{uReconstructY} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uReconstructY]{uReconstructY} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uReconstructZ]{uReconstructZ} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uReconstructZ]{uReconstructZ} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uReconstructZonal]{uReconstructZonal} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uReconstructZonal]{uReconstructZonal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uReconstructMeridional]{uReconstructMeridional} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uReconstructMeridional]{uReconstructMeridional} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uSrcReconstructX]{uSrcReconstructX} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uSrcReconstructX]{uSrcReconstructX} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uSrcReconstructY]{uSrcReconstructY} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uSrcReconstructY]{uSrcReconstructY} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uSrcReconstructZ]{uSrcReconstructZ} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uSrcReconstructZ]{uSrcReconstructZ} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uSrcReconstructZonal]{uSrcReconstructZonal} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uSrcReconstructZonal]{uSrcReconstructZonal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_uSrcReconstructMeridional]{uSrcReconstructMeridional} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_uSrcReconstructMeridional]{uSrcReconstructMeridional} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_MontPot]{MontPot} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_MontPot]{MontPot} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_pressure]{pressure} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_pressure]{pressure} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_wTop]{wTop} ( nVertLevelsP1 nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_wTop]{wTop} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_vertVelocityTop]{vertVelocityTop} ( nVertLevelsP1 nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_vertVelocityTop]{vertVelocityTop} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_rhoDisplaced]{rhoDisplaced} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_rhoDisplaced]{rhoDisplaced} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_BruntVaisalaFreqTop]{BruntVaisalaFreqTop} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_BruntVaisalaFreqTop]{BruntVaisalaFreqTop} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_viscosity]{viscosity} ( nVertLevels nEdges Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_viscosity]{viscosity} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_vh]{vh} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_vh]{vh} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_circulation]{circulation} ( nVertLevels nVertices Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_circulation]{circulation} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_gradVor_t]{gradVor\_t} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_gradVor_t]{gradVor\_t} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_gradVor_n]{gradVor\_n} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_gradVor_n]{gradVor\_n} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_areaCellGlobal]{areaCellGlobal} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_areaCellGlobal]{areaCellGlobal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_areaEdgeGlobal]{areaEdgeGlobal} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_areaEdgeGlobal]{areaEdgeGlobal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_areaTriangleGlobal]{areaTriangleGlobal} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_areaTriangleGlobal]{areaTriangleGlobal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_volumeCellGlobal]{volumeCellGlobal} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_volumeCellGlobal]{volumeCellGlobal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_volumeEdgeGlobal]{volumeEdgeGlobal} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_volumeEdgeGlobal]{volumeEdgeGlobal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_CFLNumberGlobal]{CFLNumberGlobal} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_CFLNumberGlobal]{CFLNumberGlobal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_nAccumulate]{nAccumulate} ( Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_nAccumulate]{nAccumulate} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_ssh]{acc\_ssh} ( nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_ssh]{acc\_ssh} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_sshVar]{acc\_sshVar} ( nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_sshVar]{acc\_sshVar} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_uReconstructZonal]{acc\_uReconstructZonal} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_uReconstructZonal]{acc\_uReconstructZonal} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_uReconstructMeridional]{acc\_uReconstructMeridional} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_uReconstructMeridional]{acc\_uReconstructMeridional} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_uReconstructZonalVar]{acc\_uReconstructZonalVar} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_uReconstructZonalVar]{acc\_uReconstructZonalVar} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_uReconstructMeridionalVar]{acc\_uReconstructMeridionalVar} ( nVertLevels nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_uReconstructMeridionalVar]{acc\_uReconstructMeridionalVar} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_u]{acc\_u} ( nVertLevels nEdges Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_u]{acc\_u} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_uVar]{acc\_uVar} ( nVertLevels nEdges Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_uVar]{acc\_uVar} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_state_acc_vertVelocityTop]{acc\_vertVelocityTop} ( nVertLevelsP1 nCells Time ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_state_acc_vertVelocityTop]{acc\_vertVelocityTop} & {\bf \color{red} MISSING} \\
\hline
\end{longtable}
\end{center}
@@ -162,171 +162,171 @@
\label{sec:var_tab_mesh}
{\small
\begin{center}
-\begin{longtable}{| c | c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Persistence Name ( Dimensions ) & I/O & Units & Super Array \\
+ Name & Description \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_latCell]{latCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_latCell]{latCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_lonCell]{lonCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_lonCell]{lonCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_xCell]{xCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_xCell]{xCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_yCell]{yCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_yCell]{yCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_zCell]{zCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_zCell]{zCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_indexToCellID]{indexToCellID} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_indexToCellID]{indexToCellID} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_latEdge]{latEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_latEdge]{latEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_lonEdge]{lonEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_lonEdge]{lonEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_xEdge]{xEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_xEdge]{xEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_yEdge]{yEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_yEdge]{yEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_zEdge]{zEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_zEdge]{zEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_indexToEdgeID]{indexToEdgeID} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_indexToEdgeID]{indexToEdgeID} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_latVertex]{latVertex} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_latVertex]{latVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_lonVertex]{lonVertex} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_lonVertex]{lonVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_xVertex]{xVertex} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_xVertex]{xVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_yVertex]{yVertex} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_yVertex]{yVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_zVertex]{zVertex} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_zVertex]{zVertex} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_indexToVertexID]{indexToVertexID} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_indexToVertexID]{indexToVertexID} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_meshDensity]{meshDensity} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_meshDensity]{meshDensity} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_meshScalingDel2]{meshScalingDel2} ( nEdges ) & Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_meshScalingDel2]{meshScalingDel2} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_meshScalingDel4]{meshScalingDel4} ( nEdges ) & Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_meshScalingDel4]{meshScalingDel4} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_meshScaling]{meshScaling} ( nEdges ) & Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_meshScaling]{meshScaling} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_cellsOnEdge]{cellsOnEdge} ( TWO nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_cellsOnEdge]{cellsOnEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_nEdgesOnCell]{nEdgesOnCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_nEdgesOnCell]{nEdgesOnCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_nEdgesOnEdge]{nEdgesOnEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_nEdgesOnEdge]{nEdgesOnEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_edgesOnCell]{edgesOnCell} ( maxEdges nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgesOnCell]{edgesOnCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_edgesOnEdge]{edgesOnEdge} ( maxEdges2 nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgesOnEdge]{edgesOnEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_weightsOnEdge]{weightsOnEdge} ( maxEdges2 nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_weightsOnEdge]{weightsOnEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_dvEdge]{dvEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_dvEdge]{dvEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_dcEdge]{dcEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_dcEdge]{dcEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_angleEdge]{angleEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_angleEdge]{angleEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_areaCell]{areaCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_areaCell]{areaCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_areaTriangle]{areaTriangle} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_areaTriangle]{areaTriangle} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_edgeNormalVectors]{edgeNormalVectors} ( R3 nEdges ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgeNormalVectors]{edgeNormalVectors} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_localVerticalUnitVectors]{localVerticalUnitVectors} ( R3 nCells ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_localVerticalUnitVectors]{localVerticalUnitVectors} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_cellTangentPlane]{cellTangentPlane} ( R3 TWO nEdges ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_cellTangentPlane]{cellTangentPlane} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_cellsOnCell]{cellsOnCell} ( maxEdges nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_cellsOnCell]{cellsOnCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_verticesOnCell]{verticesOnCell} ( maxEdges nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_verticesOnCell]{verticesOnCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_verticesOnEdge]{verticesOnEdge} ( TWO nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_verticesOnEdge]{verticesOnEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_edgesOnVertex]{edgesOnVertex} ( vertexDegree nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgesOnVertex]{edgesOnVertex} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_cellsOnVertex]{cellsOnVertex} ( vertexDegree nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_cellsOnVertex]{cellsOnVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_kiteAreasOnVertex]{kiteAreasOnVertex} ( vertexDegree nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_kiteAreasOnVertex]{kiteAreasOnVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_fEdge]{fEdge} ( nEdges ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_fEdge]{fEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_fVertex]{fVertex} ( nVertices ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_fVertex]{fVertex} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_bottomDepth]{bottomDepth} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_bottomDepth]{bottomDepth} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_deriv_two]{deriv\_two} ( maxEdges2 TWO nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_deriv_two]{deriv\_two} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_adv_coefs]{adv\_coefs} ( nAdvectionCells nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_adv_coefs]{adv\_coefs} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_adv_coefs_2nd]{adv\_coefs\_2nd} ( nAdvectionCells nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_adv_coefs_2nd]{adv\_coefs\_2nd} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_adv_coefs_3rd]{adv\_coefs\_3rd} ( nAdvectionCells nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_adv_coefs_3rd]{adv\_coefs\_3rd} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_advCellsForEdge]{advCellsForEdge} ( nAdvectionCells nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_advCellsForEdge]{advCellsForEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_nAdvCellsForEdge]{nAdvCellsForEdge} ( nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_nAdvCellsForEdge]{nAdvCellsForEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_highOrderAdvectionMask]{highOrderAdvectionMask} ( nVertLevels nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_highOrderAdvectionMask]{highOrderAdvectionMask} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_lowOrderAdvectionMask]{lowOrderAdvectionMask} ( nVertLevels nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_lowOrderAdvectionMask]{lowOrderAdvectionMask} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_defc_a]{defc\_a} ( maxEdges nCells ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_defc_a]{defc\_a} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_defc_b]{defc\_b} ( maxEdges nCells ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_defc_b]{defc\_b} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_kdiff]{kdiff} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_kdiff]{kdiff} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_coeffs_reconstruct]{coeffs\_reconstruct} ( R3 maxEdges nCells ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_coeffs_reconstruct]{coeffs\_reconstruct} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_maxLevelCell]{maxLevelCell} ( nCells ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_maxLevelCell]{maxLevelCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_maxLevelEdgeTop]{maxLevelEdgeTop} ( nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_maxLevelEdgeTop]{maxLevelEdgeTop} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_maxLevelEdgeBot]{maxLevelEdgeBot} ( nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_maxLevelEdgeBot]{maxLevelEdgeBot} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_maxLevelVertexTop]{maxLevelVertexTop} ( nVertices ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_maxLevelVertexTop]{maxLevelVertexTop} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_maxLevelVertexBot]{maxLevelVertexBot} ( nVertices ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_maxLevelVertexBot]{maxLevelVertexBot} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_refBottomDepth]{refBottomDepth} ( nVertLevels ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_refBottomDepth]{refBottomDepth} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_refBottomDepthTopOfCell]{refBottomDepthTopOfCell} ( nVertLevelsP1 ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_refBottomDepthTopOfCell]{refBottomDepthTopOfCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_hZLevel]{hZLevel} ( nVertLevels ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_hZLevel]{hZLevel} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_vertCoordMovementWeights]{vertCoordMovementWeights} ( nVertLevels ) & Input/Restart/Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_vertCoordMovementWeights]{vertCoordMovementWeights} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_boundaryEdge]{boundaryEdge} ( nVertLevels nEdges ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_boundaryEdge]{boundaryEdge} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_boundaryVertex]{boundaryVertex} ( nVertLevels nVertices ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_boundaryVertex]{boundaryVertex} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_boundaryCell]{boundaryCell} ( nVertLevels nCells ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_boundaryCell]{boundaryCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_edgeMask]{edgeMask} ( nVertLevels nEdges ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgeMask]{edgeMask} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_vertexMask]{vertexMask} ( nVertLevels nVertices ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_vertexMask]{vertexMask} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_cellMask]{cellMask} ( nVertLevels nCells ) & Output & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_cellMask]{cellMask} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_u_src]{u\_src} ( nVertLevels nEdges ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_u_src]{u\_src} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_temperatureRestore]{temperatureRestore} ( nCells ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_temperatureRestore]{temperatureRestore} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_salinityRestore]{salinityRestore} ( nCells ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_salinityRestore]{salinityRestore} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_windStressMonthly]{windStressMonthly} ( nMonths nEdges ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_windStressMonthly]{windStressMonthly} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_temperatureRestoreMonthly]{temperatureRestoreMonthly} ( nMonths nCells ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_temperatureRestoreMonthly]{temperatureRestoreMonthly} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_mesh_salinityRestoreMonthly]{salinityRestoreMonthly} ( nMonths nCells ) & Input/Restart & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_salinityRestoreMonthly]{salinityRestoreMonthly} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_edgeSignOnCell]{edgeSignOnCell} ( maxEdges nCells ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgeSignOnCell]{edgeSignOnCell} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_edgeSignOnVertex]{edgeSignOnVertex} ( maxEdges nVertices ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_edgeSignOnVertex]{edgeSignOnVertex} & {\bf \color{red} MISSING} \\
\hline
- integer persistent \hyperref[subsec:var_sec_mesh_kiteIndexOnCell]{kiteIndexOnCell} ( maxEdges nCells ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_mesh_kiteIndexOnCell]{kiteIndexOnCell} & {\bf \color{red} MISSING} \\
\hline
\end{longtable}
\end{center}
@@ -335,21 +335,21 @@
\label{sec:var_tab_tend}
{\small
\begin{center}
-\begin{longtable}{| c | c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Persistence Name ( Dimensions ) & I/O & Units & Super Array \\
+ Name & Description \\
\hline
- real persistent \hyperref[subsec:var_sec_tend_tend_u]{tend\_u} ( nVertLevels nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_tend_tend_u]{tend\_u} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_tend_tend_h]{tend\_h} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_tend_tend_h]{tend\_h} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_tend_tend_ssh]{tend\_ssh} ( nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_tend_tend_ssh]{tend\_ssh} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_tend_tend_temperature]{tend\_temperature} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & tracers \\
+ \hyperref[subsec:var_sec_tend_tend_temperature]{tend\_temperature} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_tend_tend_salinity]{tend\_salinity} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & tracers \\
+ \hyperref[subsec:var_sec_tend_tend_salinity]{tend\_salinity} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_tend_tend_tracer1]{tend\_tracer1} ( nVertLevels nCells Time ) & None & {\bf \color{red} MISSING} & tracers \\
+ \hyperref[subsec:var_sec_tend_tend_tracer1]{tend\_tracer1} & {\bf \color{red} MISSING} \\
\hline
\end{longtable}
\end{center}
@@ -358,17 +358,17 @@
\label{sec:var_tab_diagnostics}
{\small
\begin{center}
-\begin{longtable}{| c | c | c | c |}
+\begin{longtable}{| p{2.0in} | p{4.0in} |}
\hline
- Type Persistence Name ( Dimensions ) & I/O & Units & Super Array \\
+ Name & Description \\
\hline
- real persistent \hyperref[subsec:var_sec_diagnostics_RiTopOfCell]{RiTopOfCell} ( nVertLevelsP1 nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_diagnostics_RiTopOfCell]{RiTopOfCell} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_diagnostics_RiTopOfEdge]{RiTopOfEdge} ( nVertLevelsP1 nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_diagnostics_RiTopOfEdge]{RiTopOfEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_diagnostics_vertViscTopOfEdge]{vertViscTopOfEdge} ( nVertLevelsP1 nEdges Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_diagnostics_vertViscTopOfEdge]{vertViscTopOfEdge} & {\bf \color{red} MISSING} \\
\hline
- real persistent \hyperref[subsec:var_sec_diagnostics_vertDiffTopOfCell]{vertDiffTopOfCell} ( nVertLevelsP1 nCells Time ) & None & {\bf \color{red} MISSING} & None \\
+ \hyperref[subsec:var_sec_diagnostics_vertDiffTopOfCell]{vertDiffTopOfCell} & {\bf \color{red} MISSING} \\
\hline
\end{longtable}
\end{center}
</font>
</pre>