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<DIV><FONT face=Verdana color=#003399 size=2>
<DIV><FONT face=Verdana color=#003399 size=2>
<DIV><FONT face=Verdana color=#003399 size=2>Dear John,</FONT></DIV>
<DIV>Thanks for your help.</DIV>
<DIV>I did compile the METv1.1 successfully without the pb2nc by
setting the line "DISABLE_PB2NC = 1 " in
Makefile.</DIV>
<DIV>The option "<FONT
color=#000000>BUFRLIB and PB2NC " is not compilable
on the computer I use.</FONT></DIV>
<DIV>I did the steps you told me, but the libbufrlib.a couldn't work
well.</DIV>
<DIV> </DIV>
<DIV>I have a suggestion that during the time you release the new
version of METv2.0, all the liberaries MET needed be included in the
MET tar file.</DIV>
<DIV>That would help users.</DIV>
<DIV> </DIV>
<DIV>Looking forward to see the new version MET released.</DIV>
<DIV> </DIV>
<DIV>Sincerely,</DIV>
<DIV>ZhenCai, DU</DIV>
<DIV><FONT color=#003399>祝好！</FONT></DIV>
<DIV><FONT color=#003399>杜振彩</FONT></DIV>
<DIV><FONT face=Verdana color=#c0c0c0
size=2>2009-03-08</FONT> 12:07:39</DIV><FONT face=Verdana
color=#003399 size=2></FONT>
<DIV><FONT face="Times New Roman" color=#333399
size=3>**************************************</FONT></DIV>
<DIV>
<DIV>
<DIV>
<DIV><FONT face="Times New Roman" color=#333399 size=3>DU
ZhenCai</FONT></DIV>
<DIV><FONT face="Times New Roman" color=#333399
size=3>Center for Monsoon System Research（CMSR）, </FONT></DIV>
<DIV><FONT face="Times New Roman" color=#333399 size=3>Institute of
Atmospheric Physics（IAP）, </FONT></DIV>
<DIV><FONT face="Times New Roman" color=#333399 size=3>Chinese
Academy of Sciences（CAS）</FONT></DIV>
<DIV><FONT face="Times New Roman" color=#333399
size=3>Add: </FONT></DIV>
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color=#333399 size=3>P.O. Box 2718</FONT></DIV>
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<DIV style="TEXT-INDENT: 4em"><FONT face="Times New Roman"
color=#333399 size=3>Haidian District, Beijing, 100190</FONT></DIV>
<DIV style="TEXT-INDENT: 4em"><FONT face="Times New Roman"
color=#333399 size=3>People's Republic of China</FONT></DIV>
<DIV><FONT face="Times New Roman" color=#333399
size=3>Tel: +8610-62659180 +8610-82995178</FONT></DIV>
<DIV><FONT face="Times New Roman" color=#333399
size=3>Fax: +8610-62560390</FONT></DIV>
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size=3><SPAN style="mso-tab-count: 7">Net Tools：MSN：<A
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face="Times New Roman"
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<DIV><FONT face="Times New Roman" color=#333399
size=3>**************************************</FONT></DIV></DIV></DIV></DIV></FONT></FONT><FONT
face=Verdana color=#003399 size=2>
<HR>
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<DIV><FONT face=Verdana color=#003399 size=2>
<DIV><FONT color=#000000>ZhenCai,</FONT></DIV>
<DIV><FONT color=#000000></FONT></DIV>
<DIV><FONT
color=#000000>You should be able to *COMPILE* fine on a 64-bit machine. It's just that when you actually try to run PB2NC, you'll experience errors. The error message I see below is that the compiler can't find</FONT></DIV>
<DIV><FONT
color=#000000>the BUFRLIB file for which it's looking. I see that you're trying to use a version of BUFRLIB related to WRF in /disk2/hg/dzc/wrfpost/iowrf. So the compiler is looking for the file</FONT></DIV>
<DIV><FONT
color=#000000>"/disk2/hg/dzc/wrfpost/iowrf/libbufr.a". I'm not sure whether that will work on not.</FONT></DIV>
<DIV><FONT color=#000000></FONT></DIV>
<DIV><FONT
color=#000000>If you are not able to build MET as 32-bit on your machine, I don't think you're going to have much luck running BUFRLIB and PB2NC right now. So while I could help you to get them to compile, it</FONT></DIV>
<DIV><FONT
color=#000000>won't make much difference because of the runtime errors you'll see.</FONT></DIV>
<DIV><FONT color=#000000></FONT></DIV>
<DIV><FONT
color=#000000>So I'd suggest the following:</FONT></DIV>
<DIV><FONT
color=#000000>(1) In the top-level MET Makefile, find the line for "DISABLE_PB2NC" and set it as:</FONT></DIV>
<DIV><FONT
color=#000000> DISABLE_PB2NC = 1</FONT></DIV>
<DIV><FONT
color=#000000> That turns off the compilation of the PB2NC tool.</FONT></DIV>
<DIV><FONT
color=#000000>(2) Try rebuilding MET and hopefully all of the other tools will build fine.</FONT></DIV>
<DIV><FONT
color=#000000>(3) Go into the scripts directory: cd scripts</FONT></DIV>
<DIV><FONT
color=#000000>(4) Edit the "test_all.sh" file by commenting out the line "test_pb2nc.sh".</FONT></DIV>
<DIV><FONT
color=#000000>(5) Run the other test scripts with: ./test_all.sh >& test_all.log&</FONT></DIV>
<DIV><FONT
color=#000000>(6) Watch the execution of the test scripts: tail -f test_all.log</FONT></DIV>
<DIV><FONT color=#000000></FONT></DIV>
<DIV><FONT
color=#000000>If, for some reason, you would like to get BUFRLIB and PB2NC to actually compile, here's what you'd need to do:</FONT></DIV>
<DIV><FONT
color=#000000>(1) Retrieve BUFRLIB from http://www.nco.ncep.noaa.gov/sib/decoders/BUFRLIB/BUFRLIB.tar</FONT></DIV>
<DIV><FONT
color=#000000>(2) Untar it: tar -xvf BUFRLIB.tar</FONT></DIV>
<DIV><FONT
color=#000000>(3) Go into the BUFRLIB directory: cd BUFRLIB</FONT></DIV>
<DIV><FONT
color=#000000>(4) Build BUFRLIB with PGI using the following 3 commands:</FONT></DIV>
<DIV><FONT
color=#000000> pgcc -c -DUNDERSCORE *.c</FONT></DIV>
<DIV><FONT
color=#000000> pgf77 -c -DUNDERSCORE -Mnosecond_underscore *.f</FONT></DIV>
<DIV><FONT
color=#000000> ar crv libbufr.a *.o</FONT></DIV>
<DIV><FONT
color=#000000>(5) Edit the top-level Makefile to point to the new location of BUFRLIB.</FONT></DIV>
<DIV><FONT
color=#000000>(6) Unset the "DISABLE_PB2NC" flag in the top-level Makefile.</FONT></DIV>
<DIV><FONT
color=#000000>(7) Rebuild MET with "make clean" followed by "make"</FONT></DIV>
<DIV><FONT color=#000000></FONT></DIV>
<DIV><FONT
color=#000000>But as I've said, even if you get BUFRLIB and PB2NC compiled, you'll likely have problems at run time.</FONT></DIV>
<DIV><FONT color=#000000></FONT></DIV>
<DIV><FONT color=#000000>Hope that helps,</FONT></DIV>
<DIV><FONT color=#000000>John</FONT></DIV></FONT></DIV>
<DIV><FONT face=Verdana color=#003399 size=2><STRONG>发件人：</STRONG>
John Halley Gotway </FONT></DIV>
<DIV><FONT face=Verdana color=#003399 size=2><STRONG>发送时间：</STRONG>
2009-03-06 01:10:09 </FONT></DIV>
<DIV><FONT face=Verdana color=#003399 size=2><STRONG>收件人：</STRONG>
dfeijat </FONT></DIV>
<DIV><FONT face=Verdana color=#003399 size=2><STRONG>抄送：</STRONG>
met_help </FONT></DIV>
<DIV><FONT face=Verdana color=#003399 size=2><STRONG>主题：</STRONG>
Re: [Met_help] help with METv1.1 gmake on Linux system </FONT></DIV>
<DIV><FONT face=Verdana size=2></FONT> </DIV>
<DIV><FONT face=Verdana size=2>
<DIV>ZhenCai,</DIV>
<DIV></DIV>
<DIV>Thanks for sending the compilation log. It makes it much easier to</DIV>
<DIV>diagnose the problem.</DIV>
<DIV></DIV>
<DIV>It looks like the linker doesn't like your version of NetCDF for some</DIV>
<DIV>reason. Since MET is written primarily in C++, it links to the C++</DIV>
<DIV>interface for NetCDF. It's looking in the directory</DIV>
<DIV>"/disk2/hg/dzc/netcdf/lib" for two files: libnetcdf.a and libnetcdf_c++.a</DIV>
<DIV></DIV>
<DIV>First, please verify that those two files exist in that directory.</DIV>
<DIV></DIV>
<DIV>Second, it may be the case that you built NetCDF with the GNU compilers</DIV>
<DIV>and are building MET with the PGI compilers. You'll need to build them</DIV>
<DIV>both with the same family of compilers.</DIV>
<DIV></DIV>
<DIV>Please take a look at the following excerpt from the MET Online Tutorial:</DIV>
<DIV>http://www.dtcenter.org/met/users/support/online_tutorial/compilation/req_libs.php</DIV>
<DIV></DIV>
<DIV>In the section, "Compiling NetCDF", it lists out which environment</DIV>
<DIV>variables to set to tell the NetCDF configure script which compilers to</DIV>
<DIV>use. I think the following settings would work for you to build NetCDF</DIV>
<DIV>with the PGI compilers:</DIV>
<DIV></DIV>
<DIV>cd "directory containing NetCDF"</DIV>
<DIV>make clean</DIV>
<DIV>setenv CC /disk2/hg/dzc/pgi716/linux86-64/7.1-6/bin/pgcc</DIV>
<DIV>setenv CXX /disk2/hg/dzc/pgi716/linux86-64/7.1-6/bin/pgCC</DIV>
<DIV>setenv FC /disk2/hg/dzc/pgi716/linux86-64/7.1-6/bin/pgf90 or "" to</DIV>
<DIV>disable Fortran interface that MET doesn't use</DIV>
<DIV>setenv F90 /disk2/hg/dzc/pgi716/linux86-64/7.1-6/bin/pgf90 or "" to</DIV>
<DIV>disable Fortran interface that MET doesn't use</DIV>
<DIV>./configure --prefix=/disk2/hg/dzc/netcdf</DIV>
<DIV>make</DIV>
<DIV>make install</DIV>
<DIV></DIV>
<DIV>Try working on your NetCDF build, and then try rebuilding MET.</DIV>
<DIV></DIV>
<DIV>If you haven't already done so, you should probably download the latest</DIV>
<DIV>set of bug fixes for METv1.1. The single tar file named</DIV>
<DIV>"METv1.1_patches_20090212.tar.gz" contains all of them:</DIV>
<DIV>http://www.dtcenter.org/met/users/support/known_issues/METv1.1/index.php</DIV>
<DIV></DIV>
<DIV>Also, since you're building on a 64-bit machines, you will likely have</DIV>
<DIV>trouble using BUFRLIB and PB2NC. Here's a discussion about problems on</DIV>
<DIV>64-bit machines:</DIV>
<DIV>http://www.dtcenter.org/met/users/support/known_issues/METv1.0/met_64_bit.php</DIV>
<DIV></DIV>
<DIV>And lastly, just to let you know, METv2.0 is due to be released in the</DIV>
<DIV>next couple of months. We'll send an email when it's available.</DIV>
<DIV></DIV>
<DIV>Good luck,</DIV>
<DIV>John Halley Gotway</DIV>
<DIV>johnhg@ucar.edu</DIV>
<DIV></DIV>
<DIV>> Dear met_help,</DIV>
<DIV>></DIV>
<DIV>> I am trying to compile the METv1.1 on Linux.</DIV>
<DIV>> However, something errors happened as followings,</DIV>
<DIV>> Can you give me some advices to fix it?</DIV>
<DIV>> Thanks in advance.</DIV>
<DIV>></DIV>
<DIV>> Sincerely,</DIV>
<DIV>> ZhenCai, DU</DIV>
<DIV>> http://cmsr.iap.ac.cn</DIV>
<DIV>> Center for Monsoon System Research,</DIV>
<DIV>> Institute of Atmospheric Physics,</DIV>
<DIV>> Chinese Academy of Sciences</DIV>
<DIV>></DIV>
<DIV>> 2009-03-05</DIV>
<DIV>></DIV>
<DIV>> ==============================</DIV>
<DIV>> The Linux System I use:</DIV>
<DIV>> wrfpost/METv1.1> uname -a</DIV>
<DIV>> Linux XE1300 2.6.16.27-0.9-smp #1 SMP Tue Feb 13 09:35:18 UTC 2007 x86_64</DIV>
<DIV>> x86_64 x86_64 GNU/Linux</DIV>
<DIV>></DIV>
<DIV>> wrfpost/METv1.1> cat /proc/version</DIV>
<DIV>> Linux version 2.6.16.27-0.9-smp (geeko@buildhost) (gcc version 4.1.0 (SUSE</DIV>
<DIV>> Linux)) #1 SMP Tue Feb 13 09:35:18 UTC 2007</DIV>
<DIV>> ===========================</DIV>
<DIV>> errors during gmake METv1.1:</DIV>
<DIV>></DIV>
<DIV>> interest.cc:</DIV>
<DIV>> /disk2/hg/dzc/pgi716/linux86-64/7.1-6/bin/pgCC set.cc -Bstatic -c -I..</DIV>
<DIV>> -I/disk2/hg/dzc/netcdf/include</DIV>
<DIV>> set.cc:</DIV>
<DIV>> ar -rs libvx_wrfmode.a WrfMode_Conf.o engine.o interest.o set.o</DIV>
<DIV>> ar: creating libvx_wrfmode.a</DIV>
<DIV>> ranlib libvx_wrfmode.a</DIV>
<DIV>></DIV>
<DIV>> cp libvx_wrfmode.a ../.</DIV>
<DIV>></DIV>
<DIV>> *** Making pcp_combine application ***</DIV>
<DIV>></DIV>
<DIV>></DIV>
<DIV>> /disk2/hg/dzc/pgi716/linux86-64/7.1-6/bin/pgCC -o pcp_combine</DIV>
<DIV>> pcp_combine.cc \</DIV>
<DIV>> -Bstatic -DMET_BASE=\"/disk2/hg/dzc/wrfpost/METv1.1\" \</DIV>
<DIV>> -I../../lib -I/disk2/hg/dzc/netcdf/include</DIV>
<DIV>> -I/disk2/hg/dzc/wrfpost/gsl112/include \</DIV>
<DIV>> -L../../lib -L/disk2/hg/dzc/netcdf/lib -L/disk2/hg/dzc/wrfpost/gsl112/lib</DIV>
<DIV>> \</DIV>
<DIV>> -lvx_met_util -lvx_analysis_util -lvx_wrfdata -lvx_met_util \</DIV>
<DIV>> -lvx_contable -lvx_grib_classes \</DIV>
<DIV>> -lvx_econfig -lvx_gsl_prob -lgsl \</DIV>
<DIV>> -lvx_plot_util -lvx_render -lvx_pxm -lvx_color -lvx_ps -lvx_afm \</DIV>
<DIV>> -lvx_data_grids -lvx_gnomon -lvx_nav -lvx_cal -lvx_util -lvx_math -lm \</DIV>
<DIV>> -lnetcdf_c++ -lnetcdf \</DIV>
<DIV>></DIV>
<DIV>> pcp_combine.cc:</DIV>
<DIV>> pcp_combine.o: In function `write_netcdf__FLT1iR10GribRecord':</DIV>
<DIV>> pcp_combine.cc:(.text+0x2830): undefined reference to `NcFile::__ct(char</DIV>
<DIV>> const *, NcFile::FileMode, unsigned long *, unsigned long,</DIV>
<DIV>> NcFile::FileFormat)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x285e): undefined reference to `NcFile::is_valid(</DIV>
<DIV>> const(void))'</DIV>
<DIV>> pcp_combine.cc:(.text+0x28dd): undefined reference to</DIV>
<DIV>> `NcFile::close(void)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x29f3): undefined reference to</DIV>
<DIV>> `NcFile::add_att(char const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x2b10): undefined reference to</DIV>
<DIV>> `NcFile::add_att(char const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x2b35): undefined reference to</DIV>
<DIV>> `NcFile::add_att(char const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x2b93): undefined reference to</DIV>
<DIV>> `NcFile::add_att(char const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x2bcd): undefined reference to</DIV>
<DIV>> `NcFile::add_att(char const *, char const *)'</DIV>
<DIV>> pcp_combine.o:pcp_combine.cc:(.text+0x2bff): more undefined references to</DIV>
<DIV>> `NcFile::add_att(char const *, char const *)' follow</DIV>
<DIV>> pcp_combine.o: In function `write_netcdf__FLT1iR10GribRecord':</DIV>
<DIV>> pcp_combine.cc:(.text+0x32c2): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x32d4): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x32e9): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, float)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x32ff): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x3315): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x332e): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, float)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x3341): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, int)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x336c): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x3397): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x33cf): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x33e4): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, float)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x349a): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x34ae): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, long)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x354c): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x3560): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, long)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x35a5): undefined reference to `NcVar::add_att(char</DIV>
<DIV>> const *, char const *)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x3756): undefined reference to `NcVar::put(float</DIV>
<DIV>> const *, long, long, long, long, long)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x37b4): undefined reference to `NcVar::put(float</DIV>
<DIV>> const *, long, long, long, long, long)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x380e): undefined reference to `NcVar::put(float</DIV>
<DIV>> const *, long, long, long, long, long)'</DIV>
<DIV>> pcp_combine.cc:(.text+0x389e): undefined reference to</DIV>
<DIV>> `NcFile::close(void)'</DIV>
<DIV>> gmake[3]: *** [pcp_combine] Error 2</DIV>
<DIV>> gmake[2]: *** [all] Error 2</DIV>
<DIV>> gmake[1]: *** [targets] Error 2</DIV>
<DIV>> gmake: *** [all] Error 2</DIV>
<DIV>> _______________________________________________</DIV>
<DIV>> Met_help mailing list</DIV>
<DIV>> Met_help@mailman.ucar.edu</DIV>
<DIV>> http://mailman.ucar.edu/mailman/listinfo/met_help</DIV>
<DIV>></DIV>
<DIV></DIV>
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