[Dart-dev] DART/branches Revision: 12645

[dart at ucar.edu]

hendric at ucar.edu
2018-06-07 14:47:34 -0600 (Thu, 07 Jun 2018)
50

merging most recent changes from the rma_trunk.




Index: DART/branches/rma_fill_inf
===================================================================
--- DART/branches/rma_fill_inf	2018-06-07 19:13:36 UTC (rev 12644)
+++ DART/branches/rma_fill_inf	2018-06-07 20:47:34 UTC (rev 12645)

Property changes on: DART/branches/rma_fill_inf
___________________________________________________________________
Modified: svn:mergeinfo
## -12,6 +12,7 ##
 /DART/branches/rma_cf_conventions:9727-10086
 /DART/branches/rma_cice:10649-10852
 /DART/branches/rma_clm:8905-9126
+/DART/branches/rma_closest_member_tool:12576-12617
 /DART/branches/rma_diag:9623-9737
 /DART/branches/rma_fix_clm_restarts:9634-11919
 /DART/branches/rma_fixed_filenames:10702-10895
## -36,6 +37,7 ##
 /DART/branches/rma_sprint:8095-8166
 /DART/branches/rma_state_structure_test_dir:9472-9676
 /DART/branches/rma_state_structure_unit_test:9691-10268
+/DART/branches/rma_trunk:12517-12644
 /DART/branches/rma_trunk_clamping:8786-8801
 /DART/branches/rma_trunk_filename:8011-8157
 /DART/branches/rma_trunk_get_state_fun:8568-8596
Modified: DART/branches/rma_fill_inf/CHANGELOG
===================================================================
--- DART/branches/rma_fill_inf/CHANGELOG	2018-06-07 19:13:36 UTC (rev 12644)
+++ DART/branches/rma_fill_inf/CHANGELOG	2018-06-07 20:47:34 UTC (rev 12645)
@@ -697,12 +697,59 @@
 - Updated the location module test programs.
 
 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
++ May DD 2018 :: enhanced inflation option, scripting       $Revision$
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
+
+- Enhanced inflation algorithm added.  See the filter_mod.html for new
+documentation on this option.
+
+- Updated WRF scripts for the Manhattan release.
+
+- Obs_diag reports statistics on DART QC 8, observation failed vertical
+conversion.  Matlab scripts also updated to support QC 8.
+
+- New parallel conversion scripts for GPS Radio Occultation observations and
+  NCEP prepbufr conversions.
+
+- Further updates to documentation files to change KIND to QTY or Quantity.
+
+- Documented required changes when moving from the Lanai/Classic release to
+Manhattan in documentation/html/Manhattan_diffs_from_Lanai.html
+
+- Expanded the routines in the netcdf_utilities_mod.f90
+
+- Add an ensemble handle parameter to the 6 ensemble manager routines 
+where it was missing.
+
+- The advance_time program can read/generate CESM format time strings
+(YYYY-MM-DD-SSSSS).
+
+- Fixed a bug in the netcdf read routines that under certain circumstances
+could report an array was using the unlimited dimension incorrectly.
+
+- Removed the option to try to bitwise reproduce Lanai results; due to the
+number of changes this is no longer possible.
+
+- Minor bug fixes to the (seldom used) perturb routines in the WRF 
+and MPAS_ATM model_mod.f90 files.  (used to add gaussian noise to a
+single model state to generate an ensemble; this is never the recommended
+method of starting a new experiment but the code remains for testing 
+purposes.)
+
+- Several remaining model-specific model_mod_check programs were 
+removed in favor of a single common program source file.
+
+- Keep filter_mod.dopplerfold.f90 in sync with filter_mod.f90,
+and assim_tools_mod.pf.f90 in sync with assim_tools_mod.f90.
+
+- Removed makefiles for the obsolete trans_time program.
+
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 + MMM DD YYYY :: summary of next changes                    $Revision$
 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 
-- next ...
+- obs_diag reports statistics on DART QC 8, observation failed vertical
 
-
 # <next few lines under version control, do not edit>
 # $URL$
 # $Revision$

Modified: DART/branches/rma_fill_inf/assimilation_code/modules/assimilation/adaptive_inflate_mod.f90
===================================================================
--- DART/branches/rma_fill_inf/assimilation_code/modules/assimilation/adaptive_inflate_mod.f90	2018-06-07 19:13:36 UTC (rev 12644)
+++ DART/branches/rma_fill_inf/assimilation_code/modules/assimilation/adaptive_inflate_mod.f90	2018-06-07 20:47:34 UTC (rev 12645)
@@ -16,26 +16,23 @@
 use utilities_mod,        only : register_module, open_file, close_file, &
                                  error_handler, E_ERR, E_MSG
 use random_seq_mod,       only : random_seq_type, random_gaussian, init_random_seq
-use ensemble_manager_mod, only : ensemble_type,   &
-                                 get_copy_owner_index, prepare_to_write_to_vars,                &