[Dart-dev] [4982] DART/trunk/doc/html/Kodiak_release.html: Change all the relative html page links to absolute pathnames

nancy at ucar.edu nancy at ucar.edu
Fri Jun 10 10:28:27 MDT 2011


Revision: 4982
Author:   nancy
Date:     2011-06-10 10:28:27 -0600 (Fri, 10 Jun 2011)
Log Message:
-----------
Change all the relative html page links to absolute pathnames
pointing at our SVN server.  I had to pick a path and right now
these use the trunk since we don't have the Kodiak branch
created yet.  When we branch, we should probably change 'trunk'
in these hrefs to 'branches/Kodiak' or 'tags/Kodiak', depending 
on what we do.

This is to make the release notes work for both a local checkout
of the tree, and for our webserver-hosted pages where everything 
in DART/doc/html is actually copied to the equivalent of the DART 
level, and relative hrefs won't work.

Modified Paths:
--------------
    DART/trunk/doc/html/Kodiak_release.html

-------------- next part --------------
Modified: DART/trunk/doc/html/Kodiak_release.html
===================================================================
--- DART/trunk/doc/html/Kodiak_release.html	2011-06-10 16:23:33 UTC (rev 4981)
+++ DART/trunk/doc/html/Kodiak_release.html	2011-06-10 16:28:27 UTC (rev 4982)
@@ -14,10 +14,10 @@
 <table border=0 summary="" cellpadding=5>
 <tr>
     <td valign=middle>
-    <img src="../../doc/html/Dartboard9.png" alt="DART project logo" height=70 />
+    <img src="Dartboard9.png" alt="DART project logo" height=70 />
     </td>
     <td>
-       <P>Jump to <a href="../../index.html">DART Documentation Main Index</a><br />
+       <P>Jump to <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/index.html">DART Documentation Main Index</a><br />
           <small><small>version information for this file: <br />
           <!-- version tag follows, do not edit -->
           $Id$</small></small>
@@ -82,7 +82,7 @@
 to be read in separately.  The new namelist items are
 <em class=code>inf_initial_from_file</em> and 
 <em class=code>inf_sd_initial_from_file</em>.  See the
-<a href="../../filter/filter.html#Namelist">filter namelist</a>
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/filter/filter.html#Namelist">filter namelist</a>
 documentation for more details.
 </LI>
 
@@ -90,9 +90,9 @@
 <em class=program>dart_tf_wrf</em>, had no namelist, 
 and you entered <tt>T</tt> or <tt>F</tt> to indicate 
 which direction you were converting.  Now we have
-<a href="../../models/wrf/WRF_DART_utilities/dart_to_wrf.html">wrf_to_dart</a> 
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/wrf/WRF_DART_utilities/dart_to_wrf.html">wrf_to_dart</a> 
 and
-<a href="../../models/wrf/WRF_DART_utilities/dart_to_wrf.html">dart_to_wrf</a> 
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/wrf/WRF_DART_utilities/dart_to_wrf.html">dart_to_wrf</a> 
 each with a namelist to control various options.
 </LI>
 
@@ -101,14 +101,14 @@
 with no namelists, and with several specialized variants 
 (e.g. <em class=program>trans_pv_sv_time0</em>).
 Now we have 
-<a href="../../models/cam/cam_to_dart.html">cam_to_dart</a> and 
-<a href="../../models/cam/dart_to_cam.html">dart_to_cam</a>, each with
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/cam/cam_to_dart.html">cam_to_dart</a> and 
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/cam/dart_to_cam.html">dart_to_cam</a>, each with
 a namelist to control various options.
 </LI>
 
 <LI>The <em class=code>obs_def_radar_mod.f90</em> radar observation
 module was completely rewritten and the namelist has changed substantially.
-See the <a href="../../obs_def/obs_def_radar_mod.html">module documentation</a> 
+See the <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_radar_mod.html">module documentation</a> 
 for details.
 
 For example, the defaults for the old code were:
@@ -153,7 +153,7 @@
 WRF fields are put into the state vector.  The order of the
 field names in the list sets the order of the fields in the
 state vector.  See the
-<a href="../../models/wrf/model_mod.html#Namelist">WRF model_mod</a> 
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/wrf/model_mod.html#Namelist">WRF model_mod</a> 
 documentation for details.  Although they haven't been removed
 from the namelist, the following items have no effect
 on the code anymore:
@@ -176,7 +176,7 @@
 
 <LI>The code in <em class=file>filter.f90</em> was corrected 
 to match the documentation for how the namelist item
-<a href="../../filter/filter.html#Namelist">
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/filter/filter.html#Namelist">
 <em class=code>input_qc_threshold</em></a> is handled.
 In the Jamaica release, observations with 
 incoming data QC values greater than
@@ -188,7 +188,7 @@
 
 <LI>The <em class=program>merge_obs_seq</em> utility
 has been replaced by the more comprehensive
-<a href="../../obs_sequence/obs_sequence_tool.html">
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_sequence_tool.html">
 <em class=program>obs_sequence_tool</em></a> utility.
 </LI>
 
@@ -203,7 +203,7 @@
 <LI>The sampling error correction generator program in
 <em class=file>DART/system_simulation</em> now has a 
 namelist &amp;full_error_nml.  See the
-<a href="../../system_simulation/system_simulation.html">documentation</a>
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/system_simulation/system_simulation.html">documentation</a>
 for more details.  Tables for 40 common ensemble sizes are
 pregenerated in the 
 <em class=file>DART/system_simulation/final_full_precomputed_tables</em> 
@@ -250,7 +250,7 @@
 
 <LI>The GPS Radio Occultation observation forward operator code now
 requires a namelist, <em class=code>&amp;obs_def_gps_nml</em>.  See the
-<a href="../../obs_def/obs_def_gps_mod.html#Namelist">GPS documentation</a> 
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_gps_mod.html#Namelist">GPS documentation</a> 
 for details on what to add.  All <em class=file>input.nml</em> files in
 the repository have had this added if they have the GPS module in their
 <em class=code>&amp;preprocess_nml</em> namelist.
@@ -275,43 +275,43 @@
         observed.  Adaptive inflation values can grow large where the observations
         are dense, and if that region is no longer observed the inflation is
         not recomputed.  Inflation damping shrinks the inflation values and
-        compensates for this. See the <a href="../../filter/filter.html#Inflation">
+        compensates for this. See the <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/filter/filter.html#Inflation">
         inflation documentation</a> for more details and paper references.</LI></UL>
 </LI>
 <LI>Sampling Error Correction
     <UL><LI>Compensates for the numbers of ensembles being small compared to the
         number of degrees of freedom in the system.  See the
-        last item in <a href="../../filter/filter.html#GettingStarted">this list</a>
+        last item in <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/filter/filter.html#GettingStarted">this list</a>
         for more details.</LI></UL>
 </LI>
 <LI>Adaptive Localization and Localization Diagnostics
-    <UL><LI>See <a href="../../assim_tools/assim_tools_mod.html#Localization">here</a>
+    <UL><LI>See <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/assim_tools/assim_tools_mod.html#Localization">here</a>
          for a discussion of localization-related issues.</LI></UL>
 </LI>
 <LI>Scale height vertical localization option in 3d models
-    <UL><LI>See <a href="../../location/threed_sphere/location_mod.html#Namelist">here</a>
+    <UL><LI>See <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/location/threed_sphere/location_mod.html#Namelist">here</a>
          for a discussion of specifying vertical localization in term of
          scale height, and <a href="http://en.wikipedia.org/wiki/Scale_height">here</a>
          for a Wikipedia discussion of how Scale Height is defined.</LI></UL>
 </LI>
 <LI>CAM supports FV code, PBS scripting
-    <UL><LI>See <a href="../../models/cam/model_mod.html">here</a> for details
+    <UL><LI>See <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/cam/model_mod.html">here</a> for details
          on the features of the CAM/DART system</LI></UL>
 </LI>
 <LI>Boxcar Kernel Filter Option
     <UL><LI>See 
-    <a href="../../assim_tools/assim_tools_mod.html#FilterTypes">here</a> for
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/assim_tools/assim_tools_mod.html#FilterTypes">here</a> for
      how to select it in the namelist.
     </LI></UL>
 </LI>
 <LI>Option for "undefined vertical location" for obs using the 3d sphere locations
     <UL><LI>See 
-    <a href="../../location/threed_sphere/location_mod.html">here</a> for how to
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/location/threed_sphere/location_mod.html">here</a> for how to
      specify it when creating observations.
     </LI></UL>
 </LI>
 <LI>Schedule module for repeated time intervals
-    <UL><LI>See documentation <a href="../../time_manager/schedule_mod.html">here</a>
+    <UL><LI>See documentation <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/time_manager/schedule_mod.html">here</a>
     </LI></UL>
 </LI>
 <LI>Support for 2 different Mars calendars in time manager
@@ -324,12 +324,12 @@
 <LI>Forward operators now have access to the ensemble number and
 the state time if they want to make use of this information
     <UL><LI>See the "Get Expected Obs From Def" section of this
-    <a href="../../obs_def/obs_def_mod.html">obs_def</a> documentation
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_mod.html">obs_def</a> documentation
     for details on how to use these values.</LI></UL>
 </LI>
 <LI>Option to output all echo of namelist values to a separate log file
     <UL><LI>See the
-    <a href="../../utilities/utilities_mod.html#Namelist">utilities module
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/utilities/utilities_mod.html#Namelist">utilities module
     documentation</a> for how to select where the namelist contents are output.</LI></UL>
 </LI>
 <LI>Large file support for netCDF
@@ -340,28 +340,28 @@
 </LI>
 <LI>Better support for adaptive localization
     <UL><LI>See the
-    <a href="../../assim_tools/assim_tools_mod.html#Localization">Localization
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/assim_tools/assim_tools_mod.html#Localization">Localization
     section</a> of the assim_tools documentation for details.</LI></UL>
 </LI>
 <LI>Option to localize with different distances based on observation type
     <UL><LI>See the
-    <a href="../../assim_tools/assim_tools_mod.html#Localization">Localization
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/assim_tools/assim_tools_mod.html#Localization">Localization
     section</a> of the assim_tools documentation for details.</LI></UL>
 </LI>
 <LI>The error handler can take up to 3 lines of text, so you can give more
 informative error messages on exit
     <UL><LI>See the
-    <a href="../../utilities/utilities_mod.html#Interface">utilities module</a>
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/utilities/utilities_mod.html#Interface">utilities module</a>
     documentation for details.</LI></UL>
 </LI>
 <LI>Option to output ensemble mean in restart file format when filter exits
     <UL><LI>See the
-    <a href="../../filter/filter.html#Namelist">filter program namelist</a>
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/filter/filter.html#Namelist">filter program namelist</a>
     documentation for details.</LI></UL>
 </LI>
 <LI>The start of a suite of forecast verification and evaluation tools
     <UL><LI>See the
-    <a href="../../obs_sequence/obs_seq_verify.html">verification tool</a>
+    <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_seq_verify.html">verification tool</a>
     documentation for details.</LI></UL>
 </LI>
 <LI>Performance improvement in the internal transposes for very large state
@@ -402,7 +402,7 @@
 <P>
 
 <UL>
-<LI><a href="../../models/POP/model_mod.html">POP</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/POP/model_mod.html">POP</a><br>
 <a href="http://www.cesm.ucar.edu/models/ccsm2.0.1/pop/">Ocean model in CESM</a>
 and <a href="http://climate.lanl.gov/Models/POP/">stand-alone version from
 Los Alamos</a></LI>
@@ -428,11 +428,11 @@
 the NOGAPS/DART system, contact Jim Hansen, jim.hansen at nrlmry.navy.mil</LI>
 <LI><a href="http://data1.gfdl.noaa.gov/~arl/pubrel/m/am2/doc/">AM2</a><br>
  The GFDL Atmosphere model</LI>
-<LI><a href="../../models/MITgcm_ocean/model_mod.html">MITgcm_ocean</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/MITgcm_ocean/model_mod.html">MITgcm_ocean</a><br>
 The <a href="http://paoc2001.mit.edu/cmi/development/ocean.htm">ocean component</a>
 of the MIT global model suite.
 </LI>
-<LI><a href="../../models/simple_avection/simple_avection.html">simple_advection</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/simple_avection/simple_avection.html">simple_advection</a><br>
 A simple model of advecting tracers such as CO</LI>
 <LI><a href="http://planetwrf.com/">global/planet WRF</a><br>
 A version of the WRF weather model adapted for other planets.</LI>
@@ -465,7 +465,7 @@
 with the order of the names in the namelist controlling the order
 in the state vector.  No assumptions are made about number of moist
 variables; all WRF fields must be listed explicitly.  The conversion
-tools (<a href="../../models/wrf/WRF_DART_utilities/dart_to_wrf.html">
+tools (<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/wrf/WRF_DART_utilities/dart_to_wrf.html">
 dart_to_wrf and wrf_to_dart</a>) use this same namelist, so it is
 simpler to avoid mismatches between the DART restart files and
 what the WRF model_mod is expecting.</LI>
@@ -545,37 +545,37 @@
 <P>
 
 <UL>
-<LI><a href="../../observations/MADIS/MADIS.html">MADIS</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/MADIS/MADIS.html">MADIS</a><br>
 Converters for METAR, Mesonet, Rawinsondes, ACARS, Marine,
 and Satellite Wind observations.  Optionally output moisture obs
 as specific humidity, relative humidity, and/or dewpoint obs.</LI>
-<LI><a href="../../observations/SSEC/SSEC.html">SSEC</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/SSEC/SSEC.html">SSEC</a><br>
 Convert Satellite Wind obs to DART format.</LI>
-<LI><a href="../../observations/AIRS/AIRS.html">AIRS</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/AIRS/AIRS.html">AIRS</a><br>
 Satellite observed Temperature and Moisture obs.  </LI>
-<LI><a href="../../observations/quikscat/quikscat.html">QUIKscat</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/quikscat/quikscat.html">QUIKscat</a><br>
 Satellite observed surface winds.  </LI>
-<LI><a href="../../observations/GTSPP/GTSPP.html">GTSPP</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/GTSPP/GTSPP.html">GTSPP</a><br>
 Ocean obs</LI>
-<LI><a href="../../observations/WOD/WOD.html">WOD</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/WOD/WOD.html">WOD</a><br>
 World Ocean Database (currently 2009) Temperature and Salinity obs</LI>
-<LI><a href="../../obs_def/obs_def_ocean_mod.f90">CODAR</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_ocean_mod.f90">CODAR</a><br>
 High frequency radar obs of ocean surface velocity.</LI>
-<LI><a href="../../observations/var/var.html">VAR</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/var/var.html">VAR</a><br>
 Little-r and radar obs</LI>
-<LI><a href="../../observations/text/text_to_obs.html">Text</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/text/text_to_obs.html">Text</a><br>
 Reads text data files, a good template for converting obs stored in
 files without some kind of data library format (netCDF, HDF, etc)</a></LI>
-<LI><a href="../../obs_def/obs_def_altimeter_mod.f90">Altimeter</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_altimeter_mod.f90">Altimeter</a><br>
 From a variety of sources.</LI>
-<LI><a href="../../obs_def/obs_def_dewpoint_mod.f90">Dewpoint</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_dewpoint_mod.f90">Dewpoint</a><br>
 From a variety of sources.</LI>
-<LI><a href="../../obs_def/obs_def_reanalysis_bufr_mod.f90">Dropsonde</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_reanalysis_bufr_mod.f90">Dropsonde</a><br>
 Sonde type separate from standard Radiosondes</LI>
-<LI><a href="../../obs_def/obs_def_TES_nadir_mod.f90">Mars TES radiances</a></LI>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_TES_nadir_mod.f90">Mars TES radiances</a></LI>
 <LI>hurricane/tropical storm vortex position<br>
 (currently only implemented in 
-<a href="../../models/wrf/model_mod.html">wrf model_mod</a>)</LI>
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/wrf/model_mod.html">wrf model_mod</a>)</LI>
 </UL>
 
 </P>
@@ -583,7 +583,7 @@
 <P>
 All the observation converters have moved to their own
 top level directory <em class=file>observations</em>.
-See the <a href="../../observations/observations.html">overview 
+See the <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/observations.html">overview 
 documentation</a> for general information on creating observation
 files for use in the ensemble assimilation system.
 </P>
@@ -597,9 +597,9 @@
 you are running a month or longer of diagnostics for a time series
 you can easily exceed the compiled in maximum.  
 See the GPS documentation for 
-<a href="../../observations/GPS/gps.html">
+<a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/GPS/gps.html">
 creating GPS observation files</a>
-or <a href="../../obs_def/obs_def_gps_mod.html">the forward
+or <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_def/obs_def_gps_mod.html">the forward
 operator documentation</a>.
 There are also heavily revised scripts which download and convert multiple days
 of GPS obs at a time, with options to delete downloaded files automatically.
@@ -609,7 +609,7 @@
 There are two modules to set observation error values when
 creating new observation sequence files. One contains the
 default values used by NCEP, and the other contains the values
-used by ECMWF.  See the <a href="../../observations/obs_error/README">
+used by ECMWF.  See the <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/observations/obs_error/README">
 DART/observations/obs_error/README</a> file for more details.
 </P>
 
@@ -643,7 +643,7 @@
 <P>
 
 <UL>
-<LI><a href="../../DART_LAB/DART_LAB.html">DART_LAB</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/DART_LAB/DART_LAB.html">DART_LAB</a><br>
 Matlab GUI presentation of fundamental assimilation concepts</LI>
 <LI>linkobs</LI>
 <LI>rank histograms</LI>
@@ -678,15 +678,15 @@
 <P>
 
 <UL>
-<LI><a href="../../obs_sequence/obs_seq_to_netcdf.html">convert obs_seq files to netCDF</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_seq_to_netcdf.html">convert obs_seq files to netCDF</a><br>
 </LI>
-<LI><a href="../../obs_sequence/obs_seq_coverage.html">observation coverage</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_seq_coverage.html">observation coverage</a><br>
 </LI>
-<LI><a href="../../obs_sequence/obs_selection.html">observation selection</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_selection.html">observation selection</a><br>
 </LI>
-<LI><a href="../../obs_sequence/obs_seq_verify.html">observation verification</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_seq_verify.html">observation verification</a><br>
 </LI>
-<LI><a href="../../obs_sequence/obs_common_subset.html">
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/obs_sequence/obs_common_subset.html">
 select common observation subsets</a><br>
 A tool that operates on two (will be extended to more) <em class=file>obs_seq.final</em> 
 files which were output from two different runs of filter.  Assumes the same 
@@ -695,14 +695,14 @@
 assimilated in both experiments.  It makes a comparision with the diagnostic tools easier
 to interpret.
 </LI>
-<LI><a href="../../utilities/restart_file_tool.html">restart file tool</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/utilities/restart_file_tool.html">restart file tool</a><br>
 Generic tool that works on any DART restart file.  It is compiled with
 the corresponding model_mod which tells it how large the state vector is.
 It can alter the timestamps on the data, add or remove model advance times,
 split a single file into 1-per-ensemble or the reverse, and can be used
 to convert between ASCII and binary formats.
 </LI>
-<LI><a href="../../time_manager/advance_time.html">advance time tool</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/time_manager/advance_time.html">advance time tool</a><br>
 A generic utility for adding intervals to a Gregorian calendar date and printing
 out the new date, including handling leap year and month and year rollovers.  
 The original code was part of the WRF distribution; this version uses the 
@@ -716,15 +716,15 @@
 Will select obs only within the WRF domain, will superob,
 will select only particular obs types based on the namelist.
 </LI>
-<LI><a href="../../utilities/closest_member_tool.html">closest member tool</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/utilities/closest_member_tool.html">closest member tool</a><br>
 Combined with the new filter option to output the ensemble mean values in
 a DART restart file format, this tool allows you to select the N <i>closest</i>
 members, where there are multiple choices for how the metric is computed.
 There are also ways to select a subset of the state vector by item kind
-(as returned from the <a href="../../models/model_mod.html#get_state_meta_data">
+(as returned from the <a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/models/model_mod.html#get_state_meta_data">
 get_state_meta_data() routine</a> and compute the metric only on those values.
 </LI>
-<LI><a href="../../adaptive_inflate/fill_inflation_restart.html">fill inflation tool</a><br>
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/adaptive_inflate/fill_inflation_restart.html">fill inflation tool</a><br>
 Small tool that fills inflation restart files with constant initial inflation
 and standard deviation values.  Often the first step of a multi-step assimilation
 job differs in the namelist only for how the initial inflation values are defined.
@@ -736,7 +736,7 @@
 WRF-specific tool that moves netCDF variables from one
 file to another.  Field names to be moved can be specified
 directly in the namelist or can be listed in a separate file.</LI>
-<LI><a href="../../utilities/model_mod_check.html">
+<LI><a href="https://proxy.subversion.ucar.edu/DAReS/DART/trunk/utilities/model_mod_check.html">
 model_mod verification/check tool</a><br>
 Tool to help when creating a new model interface file (usually named 
 <em class=file>model_mod.f90</em>).  Calls routines to help with


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