[Dart-dev] [4347] DART/trunk/models/POP/shell_scripts/assimilate.csh: This version is the tested implementation of the 'distributed'

[nancy at ucar.edu]

Revision: 4347
Author:   thoar
Date:     2010-04-13 11:37:02 -0600 (Tue, 13 Apr 2010)
Log Message:
-----------
This version is the tested implementation of the 'distributed'
pop_to_dart and dart_to_pop conversions. They are all run in
the background and progress is controlled with a simple unix 'wait'.
Because each of the conversions happens in its own directory,
a few changes had to be added to let 'filter' work - the remnant
pop_in and pop.r.nc files (previously from pop_to_dart) had to
linked in the assimilation directory.

With 48 members - running on one node - it cuts about 8 minutes
off the execution time - not bad.

Modified Paths:
--------------
    DART/trunk/models/POP/shell_scripts/assimilate.csh

-------------- next part --------------
Modified: DART/trunk/models/POP/shell_scripts/assimilate.csh
===================================================================
--- DART/trunk/models/POP/shell_scripts/assimilate.csh	2010-04-08 21:49:55 UTC (rev 4346)
+++ DART/trunk/models/POP/shell_scripts/assimilate.csh	2010-04-13 17:37:02 UTC (rev 4347)
@@ -6,6 +6,8 @@
 #
 # $Id$
 
+# The FORCE options are not optional. 
+# the VERBOSE options are useful for debugging.
 set   MOVE = '/usr/local/bin/mv -fv'
 set   COPY = '/usr/local/bin/cp -fv --preserve=timestamps'
 set   LINK = '/usr/local/bin/ln -fvs'
@@ -181,12 +183,18 @@
 #
 #-------------------------------------------------------------------------
 
+# POP always needs a pop_in and a pop.r.nc to start.
+
+set OCN_RESTART_FILENAME = `head -1 ../rpointer.ocn.1.restart`
+${LINK} ../$OCN_RESTART_FILENAME pop.r.nc
+${LINK} ../pop2_in.1  pop_in
+
 # Determine proper observation sequence file.
 
 set OBSFNAME = `printf obs_seq.0Z.%04d%02d%02d ${OCN_YEAR} ${OCN_MONTH} ${OCN_DAY}`
 set OBS_FILE = ${OBSDIR}/${OBSFNAME} 
 
-${LINK} ${OBS_FILE} obs_seq.out
+${LINK} ${OBS_FILE}   obs_seq.out
 
 # FIXME: special for trying out non-monotonic task layouts.
 setenv ORG_PATH "${PATH}"